BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022702
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ...   235   2e-59
ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ...   235   2e-59
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus...   230   4e-58
ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana...   227   4e-57
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ...   224   3e-56

>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 2 [Vitis vinifera]
          Length = 215

 Score =  235 bits (599), Expect = 2e-59
 Identities = 130/187 (69%), Positives = 148/187 (79%), Gaps = 13/187 (6%)
 Frame = +2

Query: 164 SPLAYHHHFLPKCSIKLRKSTVAINPWKSINLLRGPLNH-------------TVRCMANP 304
           +PL +HH          R S++  +  KS  L R  L+              TVRCMAN 
Sbjct: 11  APLPHHHR---------RSSSITTSTTKSCPLFRRTLSTAVEVHVAGPHQIATVRCMANQ 61

Query: 305 RRVKMVAKQIQRELSDMLLTDKVVQCAILPESALGADRYLSSLTTISEVVVSPDLQVVKV 484
           RRVKMVAKQI+RELSDMLLTDKV+Q A+LPE+ALGADRYLSSLTTIS+V VS DLQVVKV
Sbjct: 62  RRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSADLQVVKV 121

Query: 485 YVSVFGDERGKELAIAGLKSKAKYVRSELGRRIKLRLTPEVRFIEDESLERGSRVIAILD 664
           YVSVFGDE+GKE+AIAGLKSKAKYVRSELGRR+KLRLTPE+RF+EDESLERGSRVIAILD
Sbjct: 122 YVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGSRVIAILD 181

Query: 665 RLKDEKK 685
           R+K+EKK
Sbjct: 182 RIKNEKK 188


>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 1 [Vitis vinifera]
          Length = 223

 Score =  235 bits (599), Expect = 2e-59
 Identities = 130/187 (69%), Positives = 148/187 (79%), Gaps = 13/187 (6%)
 Frame = +2

Query: 164 SPLAYHHHFLPKCSIKLRKSTVAINPWKSINLLRGPLNH-------------TVRCMANP 304
           +PL +HH          R S++  +  KS  L R  L+              TVRCMAN 
Sbjct: 11  APLPHHHR---------RSSSITTSTTKSCPLFRRTLSTAVEVHVAGPHQIATVRCMANQ 61

Query: 305 RRVKMVAKQIQRELSDMLLTDKVVQCAILPESALGADRYLSSLTTISEVVVSPDLQVVKV 484
           RRVKMVAKQI+RELSDMLLTDKV+Q A+LPE+ALGADRYLSSLTTIS+V VS DLQVVKV
Sbjct: 62  RRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSADLQVVKV 121

Query: 485 YVSVFGDERGKELAIAGLKSKAKYVRSELGRRIKLRLTPEVRFIEDESLERGSRVIAILD 664
           YVSVFGDE+GKE+AIAGLKSKAKYVRSELGRR+KLRLTPE+RF+EDESLERGSRVIAILD
Sbjct: 122 YVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGSRVIAILD 181

Query: 665 RLKDEKK 685
           R+K+EKK
Sbjct: 182 RIKNEKK 188


>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
           gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
           putative [Ricinus communis]
          Length = 221

 Score =  230 bits (587), Expect = 4e-58
 Identities = 118/146 (80%), Positives = 136/146 (93%)
 Frame = +2

Query: 248 SINLLRGPLNHTVRCMANPRRVKMVAKQIQRELSDMLLTDKVVQCAILPESALGADRYLS 427
           S +L + P  +T++CMANPRRVKMVAKQIQRELSDMLLTDKV+Q AILPE+ALGAD+YLS
Sbjct: 42  SAHLRQKPFINTIKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLS 101

Query: 428 SLTTISEVVVSPDLQVVKVYVSVFGDERGKELAIAGLKSKAKYVRSELGRRIKLRLTPEV 607
           SLTTIS+V VS DLQVVKVYVSVFGD+RGKE+AIAGLK+KAKYVRSELGRR+KLRLTPE+
Sbjct: 102 SLTTISDVEVSTDLQVVKVYVSVFGDDRGKEVAIAGLKAKAKYVRSELGRRMKLRLTPEI 161

Query: 608 RFIEDESLERGSRVIAILDRLKDEKK 685
           RFIEDES ERGSRV+AILD++K EK+
Sbjct: 162 RFIEDESFERGSRVLAILDKIKAEKE 187


>ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana]
           gi|78099793|sp|O65693.2|RBFA_ARATH RecName:
           Full=Probable ribosome-binding factor A, chloroplastic;
           Flags: Precursor gi|25082957|gb|AAN72022.1| putative
           protein [Arabidopsis thaliana]
           gi|30023650|gb|AAP13358.1| At4g34730 [Arabidopsis
           thaliana] gi|332661016|gb|AEE86416.1| ribosome-binding
           factor A [Arabidopsis thaliana]
          Length = 215

 Score =  227 bits (578), Expect = 4e-57
 Identities = 125/181 (69%), Positives = 145/181 (80%)
 Frame = +2

Query: 140 HPPPSLTLSPLAYHHHFLPKCSIKLRKSTVAINPWKSINLLRGPLNHTVRCMANPRRVKM 319
           H PP  T+S      HF         +S   +N   ++++ R     TVRCMANPRRVKM
Sbjct: 16  HHPPIYTVSSKTQAFHF--------PQSMAPVNLRTNLSVRR-----TVRCMANPRRVKM 62

Query: 320 VAKQIQRELSDMLLTDKVVQCAILPESALGADRYLSSLTTISEVVVSPDLQVVKVYVSVF 499
           VAKQI RELSDMLLTD V+Q A+LPE+ALGADRYLSSLTTIS+V VS DLQVVKVYVSVF
Sbjct: 63  VAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVSNDLQVVKVYVSVF 122

Query: 500 GDERGKELAIAGLKSKAKYVRSELGRRIKLRLTPEVRFIEDESLERGSRVIAILDRLKDE 679
           GD+RGK++AIAGLKSKAKYVRSELG+R+KLRLTPEVRFIEDE++ERGSRVIAILD++K E
Sbjct: 123 GDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDEAMERGSRVIAILDKIKAE 182

Query: 680 K 682
           K
Sbjct: 183 K 183


>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
           [Cucumis sativus] gi|449529960|ref|XP_004171965.1|
           PREDICTED: probable ribosome-binding factor A,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  224 bits (571), Expect = 3e-56
 Identities = 114/135 (84%), Positives = 129/135 (95%)
 Frame = +2

Query: 281 TVRCMANPRRVKMVAKQIQRELSDMLLTDKVVQCAILPESALGADRYLSSLTTISEVVVS 460
           T+RCMAN RR+KMVAKQIQRELSDMLLTDKV+Q AILPE++LGAD+YLSSLTTI++V VS
Sbjct: 56  TIRCMANSRRIKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEVS 115

Query: 461 PDLQVVKVYVSVFGDERGKELAIAGLKSKAKYVRSELGRRIKLRLTPEVRFIEDESLERG 640
            DLQVVKVYVSVFGDERGK++AIAGLKSKAKYVRS LG+R+KLRLTPE+RFIEDES ERG
Sbjct: 116 ADLQVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERG 175

Query: 641 SRVIAILDRLKDEKK 685
           SRVIAILDR+KD+KK
Sbjct: 176 SRVIAILDRIKDKKK 190