BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022691
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   390   e-106
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   385   e-104
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi...   362   9e-98

>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  394 bits (1011), Expect = e-107
 Identities = 202/388 (52%), Positives = 266/388 (68%)
 Frame = +1

Query: 22   MSSAMSRLYRVFANTPSKXXXXXXXXXXXXXXXHKALIENLFKERNLSKLVQNFKKLSET 201
            MS    RLYR F+ + +                 +++ +++++ERNL +LVQ FKK SE 
Sbjct: 1    MSFLSRRLYRAFSTSTAATAQATGNL--------ESVFKDIYRERNLKRLVQKFKKSSEL 52

Query: 202  PRFRGRHRIYEDTVRRLAAAKRFNSIEEVLEHQKKYHCITKEGFVVRLISLYGKVGMFDQ 381
             RFR +  IYE+TVRRLA+AKRF  IEE+LE QKKY  I++EGF VRLI+LYGK GMFD 
Sbjct: 53   DRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLITLYGKSGMFDH 112

Query: 382  ASKTFDEMPELKCERTVMSFNALLSASVQSKQFTKAEKLFRELPLSLSITPDVRSYNIVI 561
            A K FDEMP+ KCER+V+SFNALL A V SK+F K E  F ELP  LS+ PD+ SYNIVI
Sbjct: 113  AFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVI 172

Query: 562  QALCELGSLESAELMLDEMANNGVKPNLITFNTVMNGFYSDGRFLDGERIWSRMKYSGFA 741
              LC++GS++SA  MLDEM    ++P+LITFNT++NG Y+ GRFLDGE+IW RM+     
Sbjct: 173  NGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNIL 232

Query: 742  PDLVSFNAKMGGLVHGGRISEAVELVEELKSRELKPDVITYNCLLRWYCNAGNLDGAKKI 921
            PD+ S+NAK+ GLV   R+ E + LVEE++++ +KPD  ++N L++ +CN G +D A   
Sbjct: 233  PDIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNW 292

Query: 922  YDLMLENDCVPNRTTFQTLIPCIYEKGDLDLALMLCEETVNSHCLVDVGILQVVVDGLVK 1101
            Y  M ENDC+P++ TF TL+P   EKG  D A  LC+E  N  CLVD  +LQ  VDGLVK
Sbjct: 293  YGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVK 352

Query: 1102 ESRVEEAEKLVKLATSKKYGRSKLKMPS 1185
              +V EA+KLV+L  S  Y R  LK+P+
Sbjct: 353  GGKVVEAKKLVQLGNSNSYRRYNLKIPT 380


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial [Vitis vinifera]
          Length = 383

 Score =  390 bits (1002), Expect = e-106
 Identities = 203/389 (52%), Positives = 266/389 (68%), Gaps = 1/389 (0%)
 Frame = +1

Query: 22   MSSAMSRLYRVFANTPSKXXXXXXXXXXXXXXXHKALIENLFKERNLSKLVQNFKKLSET 201
            MS    RLYR F+ + +                 +++ +++++ERNL +LVQ FKK SE 
Sbjct: 1    MSFLSRRLYRAFSTSTAATAQATGNL--------ESVFKDIYRERNLKRLVQKFKKSSEL 52

Query: 202  PRFRGRHRIYEDTVRRLAAAKRFNSIEEVLEHQKKYHCITKEGFVVRLISLYGKVGMFDQ 381
             RFR +  IYE+TVRRLA+AKRF  IEE+LE QKKY  I++EGF VRLISLYGK GMFD 
Sbjct: 53   DRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDH 112

Query: 382  ASKTFDEMPELKCERTVMSFNALLSASVQSKQFTKAEKLFRELPLSLSITPDVRSYNIVI 561
            A K FDEMP+ KCER+V+SFNALL A V SK+F K E  F ELP  LS+ PD+ SYNIVI
Sbjct: 113  AFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVI 172

Query: 562  QALCELGSLESAELMLDEMANNGVKPNLITFNTVMNGFYSDGRFLDGERIWSRMKYSGFA 741
            + LC++GS++SA  MLDEM    ++P+LITFNT++NG Y+ GRFLDGE+IW RM+     
Sbjct: 173  KGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNIL 232

Query: 742  PDLVSFNAKMGGLVHG-GRISEAVELVEELKSRELKPDVITYNCLLRWYCNAGNLDGAKK 918
            PD+ S+NAK+ GLV    R+ E + LVEE++++ +KPD  ++N L++ +CN G +D A  
Sbjct: 233  PDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATN 292

Query: 919  IYDLMLENDCVPNRTTFQTLIPCIYEKGDLDLALMLCEETVNSHCLVDVGILQVVVDGLV 1098
             Y  M ENDC P++ TF TL+P   EKG  D A  LC+E  N  CLVD  +LQ  VDGLV
Sbjct: 293  WYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLV 352

Query: 1099 KESRVEEAEKLVKLATSKKYGRSKLKMPS 1185
            K  +V EA+KLV+L  S  Y R  LK+P+
Sbjct: 353  KGGKVVEAKKLVQLGNSNSYRRYNLKIPT 381


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  385 bits (989), Expect = e-104
 Identities = 201/389 (51%), Positives = 264/389 (67%), Gaps = 1/389 (0%)
 Frame = +1

Query: 22   MSSAMSRLYRVFANTPSKXXXXXXXXXXXXXXXHKALIENLFKERNLSKLVQNFKKLSET 201
            MS    RLYR F+ + +                 +++ +++++ERNL +LVQ FKK SE 
Sbjct: 1    MSFLSRRLYRAFSTSTAATAQATGNL--------ESVFKDIYRERNLKRLVQKFKKSSEL 52

Query: 202  PRFRGRHRIYEDTVRRLAAAKRFNSIEEVLEHQKKYHCITKEGFVVRLISLYGKVGMFDQ 381
             RFR +  IYE+TVRRLA+AKRF  IEE+LE QKKY  I++EGF VRLISLYGK GMFD 
Sbjct: 53   DRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDH 112

Query: 382  ASKTFDEMPELKCERTVMSFNALLSASVQSKQFTKAEKLFRELPLSLSITPDVRSYNIVI 561
            A K FDEMP+ KCER+V+SFN LL A V SK+F K E  F ELP  LS+ PD+ SYNIVI
Sbjct: 113  AFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNIVI 172

Query: 562  QALCELGSLESAELMLDEMANNGVKPNLITFNTVMNGFYSDGRFLDGERIWSRMKYSGFA 741
            + LC++GS++SA  MLDEM    ++P+LITFNT++N  Y+ GRFLDGE+IW RM+     
Sbjct: 173  KGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNIL 232

Query: 742  PDLVSFNAKMGGLVHG-GRISEAVELVEELKSRELKPDVITYNCLLRWYCNAGNLDGAKK 918
            PD+ S+NAK+ GLV    R+ E + LVEE++++ +KPD  ++N L++ +CN G +D A  
Sbjct: 233  PDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATN 292

Query: 919  IYDLMLENDCVPNRTTFQTLIPCIYEKGDLDLALMLCEETVNSHCLVDVGILQVVVDGLV 1098
             Y  M ENDC P++ TF TL+P   EKG  D A  LC+E  N  CLVD  +LQ  VDGLV
Sbjct: 293  WYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLV 352

Query: 1099 KESRVEEAEKLVKLATSKKYGRSKLKMPS 1185
            K  +V EA+KLV+L  S  Y R  LK+P+
Sbjct: 353  KGGKVVEAKKLVQLGNSNSYRRYNLKIPT 381


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  379 bits (973), Expect = e-103
 Identities = 184/336 (54%), Positives = 253/336 (75%)
 Frame = +1

Query: 124  KALIENLFKERNLSKLVQNFKKLSETPRFRGRHRIYEDTVRRLAAAKRFNSIEEVLEHQK 303
            +++ +++++ERNL +LVQ FKK SE  RFR +  IYE+TVRRLA+AKRF  IEE+LE QK
Sbjct: 35   ESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQK 94

Query: 304  KYHCITKEGFVVRLISLYGKVGMFDQASKTFDEMPELKCERTVMSFNALLSASVQSKQFT 483
            KY  I++EGF VRLISLYGK GMFD A K FDEMP+ KCER+V+SFNALL A V SK+F 
Sbjct: 95   KYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFD 154

Query: 484  KAEKLFRELPLSLSITPDVRSYNIVIQALCELGSLESAELMLDEMANNGVKPNLITFNTV 663
            K +  F+ELP +L + PDV SYNI++ A CE+GSL+SA  +LDEM   G++P+LITFNT+
Sbjct: 155  KIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTL 214

Query: 664  MNGFYSDGRFLDGERIWSRMKYSGFAPDLVSFNAKMGGLVHGGRISEAVELVEELKSREL 843
            +N FY +G + DGE+IW  MK +  AP++ S+NAK+ G++   R+SEAVEL++E+K+  +
Sbjct: 215  LNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGI 274

Query: 844  KPDVITYNCLLRWYCNAGNLDGAKKIYDLMLENDCVPNRTTFQTLIPCIYEKGDLDLALM 1023
            KPDV T N L++ +CNAGNL+ AK+ Y  +  N+  P R T+ TLIP + EKGD D+A  
Sbjct: 275  KPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATE 334

Query: 1024 LCEETVNSHCLVDVGILQVVVDGLVKESRVEEAEKL 1131
            LC+E  +   L++  +LQ V++GLVKES++EEA +L
Sbjct: 335  LCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATEL 370


>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13150-like
            [Vitis vinifera]
          Length = 379

 Score =  362 bits (930), Expect = 9e-98
 Identities = 178/343 (51%), Positives = 252/343 (73%)
 Frame = +1

Query: 157  NLSKLVQNFKKLSETPRFRGRHRIYEDTVRRLAAAKRFNSIEEVLEHQKKYHCITKEGFV 336
            +L ++V  FKK S++ RFR R+  YE  V  LA AK+F+ IE++LEHQK+Y+ I+ E F 
Sbjct: 36   SLKEMVDKFKKSSDSKRFRSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFA 95

Query: 337  VRLISLYGKVGMFDQASKTFDEMPELKCERTVMSFNALLSASVQSKQFTKAEKLFRELPL 516
            VRL++LYGK GMF+ A K FDE+P+L CERTV+SFNALLS  V SK+F K +  F+ELP 
Sbjct: 96   VRLMTLYGKAGMFEHAHKLFDELPKLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPG 155

Query: 517  SLSITPDVRSYNIVIQALCELGSLESAELMLDEMANNGVKPNLITFNTVMNGFYSDGRFL 696
            +L + PDV SYNI++ A CE+GSL+SA  +LDEM   G++P+LITFNT++N FY +G + 
Sbjct: 156  NLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYA 215

Query: 697  DGERIWSRMKYSGFAPDLVSFNAKMGGLVHGGRISEAVELVEELKSRELKPDVITYNCLL 876
            DGE+IW  MK +  AP++ S+NAK+ G++   R+SEAVEL++E+K+  +KPDV T N L+
Sbjct: 216  DGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLM 275

Query: 877  RWYCNAGNLDGAKKIYDLMLENDCVPNRTTFQTLIPCIYEKGDLDLALMLCEETVNSHCL 1056
            + +CNAGNL+ AK+ Y  +  N+  P R T+ TLIP + EKGD D+A  LC+E  +   L
Sbjct: 276  KGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWL 335

Query: 1057 VDVGILQVVVDGLVKESRVEEAEKLVKLATSKKYGRSKLKMPS 1185
            ++  +LQ V++GLVKES++EEA +LV+LA  KK+ R  L++PS
Sbjct: 336  IEPALLQQVLEGLVKESKIEEATELVELAKLKKF-RITLELPS 377