BLASTX nr result
ID: Cimicifuga21_contig00022682
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00022682 (1136 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot... 345 1e-92 ref|XP_002274677.2| PREDICTED: DNA replication complex GINS prot... 310 4e-82 ref|XP_003564787.1| PREDICTED: DNA replication complex GINS prot... 305 1e-80 dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare] 297 4e-78 gb|ACG44003.1| SLD5 [Zea mays] 291 3e-76 >ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis vinifera] gi|296083231|emb|CBI22867.3| unnamed protein product [Vitis vinifera] Length = 220 Score = 345 bits (885), Expect = 1e-92 Identities = 175/224 (78%), Positives = 201/224 (89%) Frame = +3 Query: 114 MASGSAEGLGFGSGDGDIDPSIALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQ 293 MASGS EG GF + D + S+ TTDVELLKRAWRNEKAAPEIL FQ++LVQRS EQIQ Sbjct: 1 MASGSEEGSGFPADDYE---SLIATTDVELLKRAWRNEKAAPEILHFQTALVQRSREQIQ 57 Query: 294 LMEDTVEEYEGNGTDPLTVSLYQMDLDRTQFLLRSYLRVRLRKIEKYMIYISKTDMWNRL 473 LME+TVEE+ NGTDPLTVSLYQMDLDRTQFLLRSYLR+RL+KIEKYM +I KTD+W+RL Sbjct: 58 LMEETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKTDVWSRL 117 Query: 474 SKQEQKFAKRCMDDMEKHLTQSVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKS 653 S+QEQKFAKRC DDME+HL QSVLSRLP GYQSI+KQS++SEEDDMVPEP+LDTFVFCKS Sbjct: 118 SEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFCKS 177 Query: 654 KSSLGAFQLDESGEDIVDLVADDLYVLRYKSVKPLIENGQIDIV 785 K S+ AFQLD+S +++VDLVADDLY+LRY SVKPLIE+GQID+V Sbjct: 178 KGSIEAFQLDDS-KEVVDLVADDLYILRYNSVKPLIESGQIDLV 220 >ref|XP_002274677.2| PREDICTED: DNA replication complex GINS protein SLD5-like [Vitis vinifera] Length = 214 Score = 310 bits (794), Expect = 4e-82 Identities = 162/224 (72%), Positives = 189/224 (84%) Frame = +3 Query: 114 MASGSAEGLGFGSGDGDIDPSIALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQ 293 M SGS E GF + D + S+ TTDVELLKRAW NEKAAPEIL FQ+ EQIQ Sbjct: 1 MVSGSEEESGFPADDYE---SLIATTDVELLKRAWMNEKAAPEILHFQTR------EQIQ 51 Query: 294 LMEDTVEEYEGNGTDPLTVSLYQMDLDRTQFLLRSYLRVRLRKIEKYMIYISKTDMWNRL 473 LME+TVEE+ NGTDPLTVSLYQM+LDRTQFLLRSYL++RL+KIEKYM +I KTD+W+ L Sbjct: 52 LMEETVEEFGENGTDPLTVSLYQMNLDRTQFLLRSYLQIRLQKIEKYMFHILKTDVWSWL 111 Query: 474 SKQEQKFAKRCMDDMEKHLTQSVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKS 653 S+QEQKFAKRC DDME+HL QSVLSRLP GYQSI+KQS++SEEDDMVPEP+LDTFVF KS Sbjct: 112 SEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFYKS 171 Query: 654 KSSLGAFQLDESGEDIVDLVADDLYVLRYKSVKPLIENGQIDIV 785 K S+ AFQLD+S +++VDLVADDLY+LRY SV PLIE+GQID+V Sbjct: 172 KGSIEAFQLDDS-KEVVDLVADDLYILRYNSVNPLIESGQIDLV 214 >ref|XP_003564787.1| PREDICTED: DNA replication complex GINS protein SLD5-like [Brachypodium distachyon] Length = 215 Score = 305 bits (781), Expect = 1e-80 Identities = 153/213 (71%), Positives = 182/213 (85%), Gaps = 1/213 (0%) Frame = +3 Query: 150 SGDGDIDPSIALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQLMEDTVEEYEGN 329 S D + S A TTDVELLKRAWRNEKAAPEIL+F S LV R+ EQIQL+E+T+E++ N Sbjct: 3 SWDDEDTASAAATTDVELLKRAWRNEKAAPEILRFDSPLVSRAREQIQLLEETLEDFTDN 62 Query: 330 GTDPLTVSLYQMDLDRTQFLLRSYLRVRLRKIEKYMIYISKTD-MWNRLSKQEQKFAKRC 506 G D L VSLYQMDLDR FLLRSYLR+RL+KIEKYMI+ISK+D + +RLS QEQ+FAK C Sbjct: 63 GVDDLVVSLYQMDLDRALFLLRSYLRLRLQKIEKYMIHISKSDDLMSRLSLQEQRFAKSC 122 Query: 507 MDDMEKHLTQSVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKSKSSLGAFQLDE 686 + MEKHL QSVLS+LPYGY S+ +QS+SS EDDMVPEPQLDTFVFCK+KS +GAFQLD+ Sbjct: 123 TEIMEKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQLDD 182 Query: 687 SGEDIVDLVADDLYVLRYKSVKPLIENGQIDIV 785 GE+IVDLVADDLYVLRYKS+K L+ENG+ID++ Sbjct: 183 IGEEIVDLVADDLYVLRYKSIKGLVENGRIDLI 215 >dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 217 Score = 297 bits (760), Expect = 4e-78 Identities = 146/205 (71%), Positives = 178/205 (86%), Gaps = 1/205 (0%) Frame = +3 Query: 174 SIALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQLMEDTVEEYEGNGTDPLTVS 353 S A TTDVELLKRAWRNEKAAPEIL F S+LV R+ EQIQL+E+T++++ NG D L VS Sbjct: 13 SAAATTDVELLKRAWRNEKAAPEILHFDSALVSRAREQIQLLEETLDDFTDNGVDDLVVS 72 Query: 354 LYQMDLDRTQFLLRSYLRVRLRKIEKYMIYISKTD-MWNRLSKQEQKFAKRCMDDMEKHL 530 LYQMDLDRT FLLRSYLR+RL+KIEKYM +I+ +D + +RLS+QEQ+FAK C + MEKHL Sbjct: 73 LYQMDLDRTLFLLRSYLRLRLQKIEKYMAHIANSDDLLSRLSQQEQRFAKSCKEIMEKHL 132 Query: 531 TQSVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKSKSSLGAFQLDESGEDIVDL 710 QSVLS+LPYGY S+ +QS+SS EDDMVPEPQLDTFVFCK+KS +GAFQLD+ GE++VDL Sbjct: 133 EQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQLDDIGEEVVDL 192 Query: 711 VADDLYVLRYKSVKPLIENGQIDIV 785 VADDLYVLRYKS+K L+E G+ID++ Sbjct: 193 VADDLYVLRYKSIKGLVEAGRIDLI 217 >gb|ACG44003.1| SLD5 [Zea mays] Length = 219 Score = 291 bits (744), Expect = 3e-76 Identities = 144/203 (70%), Positives = 175/203 (86%), Gaps = 1/203 (0%) Frame = +3 Query: 180 ALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQLMEDTVEEYEGNGTDPLTVSLY 359 A TTDVELLKRAWRNEKAAPEIL+F S LV R EQ QL+EDT++++ +G D L VSLY Sbjct: 17 AATTDVELLKRAWRNEKAAPEILRFDSPLVSRVREQTQLLEDTLDDFADSGVDDLVVSLY 76 Query: 360 QMDLDRTQFLLRSYLRVRLRKIEKYMIYISKT-DMWNRLSKQEQKFAKRCMDDMEKHLTQ 536 QMDLDRT FLLRSYLR+RL+KIEKY ++IS++ D+ +RLS+QE++FAK C + MEKHL Q Sbjct: 77 QMDLDRTLFLLRSYLRLRLQKIEKYTMHISRSEDLLSRLSQQERRFAKSCAEIMEKHLEQ 136 Query: 537 SVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKSKSSLGAFQLDESGEDIVDLVA 716 SVLS+LPYGY S+ +QS+SS EDDMVPEPQLDTFVFCK+K +GAFQLD+ GE++VDLVA Sbjct: 137 SVLSKLPYGYDSVSRQSLSSTEDDMVPEPQLDTFVFCKTKGDVGAFQLDDIGEEVVDLVA 196 Query: 717 DDLYVLRYKSVKPLIENGQIDIV 785 DDLYVLRYKSVK LIE G+ID++ Sbjct: 197 DDLYVLRYKSVKGLIEGGRIDLI 219