BLASTX nr result

ID: Cimicifuga21_contig00022682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022682
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   345   1e-92
ref|XP_002274677.2| PREDICTED: DNA replication complex GINS prot...   310   4e-82
ref|XP_003564787.1| PREDICTED: DNA replication complex GINS prot...   305   1e-80
dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]    297   4e-78
gb|ACG44003.1| SLD5 [Zea mays]                                        291   3e-76

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  345 bits (885), Expect = 1e-92
 Identities = 175/224 (78%), Positives = 201/224 (89%)
 Frame = +3

Query: 114 MASGSAEGLGFGSGDGDIDPSIALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQ 293
           MASGS EG GF + D +   S+  TTDVELLKRAWRNEKAAPEIL FQ++LVQRS EQIQ
Sbjct: 1   MASGSEEGSGFPADDYE---SLIATTDVELLKRAWRNEKAAPEILHFQTALVQRSREQIQ 57

Query: 294 LMEDTVEEYEGNGTDPLTVSLYQMDLDRTQFLLRSYLRVRLRKIEKYMIYISKTDMWNRL 473
           LME+TVEE+  NGTDPLTVSLYQMDLDRTQFLLRSYLR+RL+KIEKYM +I KTD+W+RL
Sbjct: 58  LMEETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKTDVWSRL 117

Query: 474 SKQEQKFAKRCMDDMEKHLTQSVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKS 653
           S+QEQKFAKRC DDME+HL QSVLSRLP GYQSI+KQS++SEEDDMVPEP+LDTFVFCKS
Sbjct: 118 SEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFCKS 177

Query: 654 KSSLGAFQLDESGEDIVDLVADDLYVLRYKSVKPLIENGQIDIV 785
           K S+ AFQLD+S +++VDLVADDLY+LRY SVKPLIE+GQID+V
Sbjct: 178 KGSIEAFQLDDS-KEVVDLVADDLYILRYNSVKPLIESGQIDLV 220


>ref|XP_002274677.2| PREDICTED: DNA replication complex GINS protein SLD5-like [Vitis
           vinifera]
          Length = 214

 Score =  310 bits (794), Expect = 4e-82
 Identities = 162/224 (72%), Positives = 189/224 (84%)
 Frame = +3

Query: 114 MASGSAEGLGFGSGDGDIDPSIALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQ 293
           M SGS E  GF + D +   S+  TTDVELLKRAW NEKAAPEIL FQ+       EQIQ
Sbjct: 1   MVSGSEEESGFPADDYE---SLIATTDVELLKRAWMNEKAAPEILHFQTR------EQIQ 51

Query: 294 LMEDTVEEYEGNGTDPLTVSLYQMDLDRTQFLLRSYLRVRLRKIEKYMIYISKTDMWNRL 473
           LME+TVEE+  NGTDPLTVSLYQM+LDRTQFLLRSYL++RL+KIEKYM +I KTD+W+ L
Sbjct: 52  LMEETVEEFGENGTDPLTVSLYQMNLDRTQFLLRSYLQIRLQKIEKYMFHILKTDVWSWL 111

Query: 474 SKQEQKFAKRCMDDMEKHLTQSVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKS 653
           S+QEQKFAKRC DDME+HL QSVLSRLP GYQSI+KQS++SEEDDMVPEP+LDTFVF KS
Sbjct: 112 SEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFYKS 171

Query: 654 KSSLGAFQLDESGEDIVDLVADDLYVLRYKSVKPLIENGQIDIV 785
           K S+ AFQLD+S +++VDLVADDLY+LRY SV PLIE+GQID+V
Sbjct: 172 KGSIEAFQLDDS-KEVVDLVADDLYILRYNSVNPLIESGQIDLV 214


>ref|XP_003564787.1| PREDICTED: DNA replication complex GINS protein SLD5-like
           [Brachypodium distachyon]
          Length = 215

 Score =  305 bits (781), Expect = 1e-80
 Identities = 153/213 (71%), Positives = 182/213 (85%), Gaps = 1/213 (0%)
 Frame = +3

Query: 150 SGDGDIDPSIALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQLMEDTVEEYEGN 329
           S D +   S A TTDVELLKRAWRNEKAAPEIL+F S LV R+ EQIQL+E+T+E++  N
Sbjct: 3   SWDDEDTASAAATTDVELLKRAWRNEKAAPEILRFDSPLVSRAREQIQLLEETLEDFTDN 62

Query: 330 GTDPLTVSLYQMDLDRTQFLLRSYLRVRLRKIEKYMIYISKTD-MWNRLSKQEQKFAKRC 506
           G D L VSLYQMDLDR  FLLRSYLR+RL+KIEKYMI+ISK+D + +RLS QEQ+FAK C
Sbjct: 63  GVDDLVVSLYQMDLDRALFLLRSYLRLRLQKIEKYMIHISKSDDLMSRLSLQEQRFAKSC 122

Query: 507 MDDMEKHLTQSVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKSKSSLGAFQLDE 686
            + MEKHL QSVLS+LPYGY S+ +QS+SS EDDMVPEPQLDTFVFCK+KS +GAFQLD+
Sbjct: 123 TEIMEKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQLDD 182

Query: 687 SGEDIVDLVADDLYVLRYKSVKPLIENGQIDIV 785
            GE+IVDLVADDLYVLRYKS+K L+ENG+ID++
Sbjct: 183 IGEEIVDLVADDLYVLRYKSIKGLVENGRIDLI 215


>dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 217

 Score =  297 bits (760), Expect = 4e-78
 Identities = 146/205 (71%), Positives = 178/205 (86%), Gaps = 1/205 (0%)
 Frame = +3

Query: 174 SIALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQLMEDTVEEYEGNGTDPLTVS 353
           S A TTDVELLKRAWRNEKAAPEIL F S+LV R+ EQIQL+E+T++++  NG D L VS
Sbjct: 13  SAAATTDVELLKRAWRNEKAAPEILHFDSALVSRAREQIQLLEETLDDFTDNGVDDLVVS 72

Query: 354 LYQMDLDRTQFLLRSYLRVRLRKIEKYMIYISKTD-MWNRLSKQEQKFAKRCMDDMEKHL 530
           LYQMDLDRT FLLRSYLR+RL+KIEKYM +I+ +D + +RLS+QEQ+FAK C + MEKHL
Sbjct: 73  LYQMDLDRTLFLLRSYLRLRLQKIEKYMAHIANSDDLLSRLSQQEQRFAKSCKEIMEKHL 132

Query: 531 TQSVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKSKSSLGAFQLDESGEDIVDL 710
            QSVLS+LPYGY S+ +QS+SS EDDMVPEPQLDTFVFCK+KS +GAFQLD+ GE++VDL
Sbjct: 133 EQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQLDDIGEEVVDL 192

Query: 711 VADDLYVLRYKSVKPLIENGQIDIV 785
           VADDLYVLRYKS+K L+E G+ID++
Sbjct: 193 VADDLYVLRYKSIKGLVEAGRIDLI 217


>gb|ACG44003.1| SLD5 [Zea mays]
          Length = 219

 Score =  291 bits (744), Expect = 3e-76
 Identities = 144/203 (70%), Positives = 175/203 (86%), Gaps = 1/203 (0%)
 Frame = +3

Query: 180 ALTTDVELLKRAWRNEKAAPEILQFQSSLVQRSSEQIQLMEDTVEEYEGNGTDPLTVSLY 359
           A TTDVELLKRAWRNEKAAPEIL+F S LV R  EQ QL+EDT++++  +G D L VSLY
Sbjct: 17  AATTDVELLKRAWRNEKAAPEILRFDSPLVSRVREQTQLLEDTLDDFADSGVDDLVVSLY 76

Query: 360 QMDLDRTQFLLRSYLRVRLRKIEKYMIYISKT-DMWNRLSKQEQKFAKRCMDDMEKHLTQ 536
           QMDLDRT FLLRSYLR+RL+KIEKY ++IS++ D+ +RLS+QE++FAK C + MEKHL Q
Sbjct: 77  QMDLDRTLFLLRSYLRLRLQKIEKYTMHISRSEDLLSRLSQQERRFAKSCAEIMEKHLEQ 136

Query: 537 SVLSRLPYGYQSIMKQSISSEEDDMVPEPQLDTFVFCKSKSSLGAFQLDESGEDIVDLVA 716
           SVLS+LPYGY S+ +QS+SS EDDMVPEPQLDTFVFCK+K  +GAFQLD+ GE++VDLVA
Sbjct: 137 SVLSKLPYGYDSVSRQSLSSTEDDMVPEPQLDTFVFCKTKGDVGAFQLDDIGEEVVDLVA 196

Query: 717 DDLYVLRYKSVKPLIENGQIDIV 785
           DDLYVLRYKSVK LIE G+ID++
Sbjct: 197 DDLYVLRYKSVKGLIEGGRIDLI 219


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