BLASTX nr result
ID: Cimicifuga21_contig00022657
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022657
(777 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinif... 116 6e-24
emb|CBI25610.3| unnamed protein product [Vitis vinifera] 116 6e-24
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis... 113 5e-23
ref|XP_002308384.1| dicer-like protein [Populus trichocarpa] gi|... 108 1e-21
ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like p... 103 4e-20
>ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 116 bits (290), Expect = 6e-24
Identities = 79/224 (35%), Positives = 111/224 (49%), Gaps = 5/224 (2%)
Frame = -3
Query: 775 TGCGINLSKKAAMRTAACQIISKLKDQGIRPXXXXXXXXXXXXXXKQEAKLIGYDETPTQ 596
T N ++K A R A+ Q+ KLKDQG K EAKLIGYDE P
Sbjct: 1409 TASATNANRKDARRIASNQLFKKLKDQGYM-LHSESLEEVLKSSSKMEAKLIGYDEKPID 1467
Query: 595 VVFLDEIQLENLRIRESSPTSGERTVDTVPMNREPANA-----HPIGRRPMSVTEAPAQR 431
V F D + E L+++E S + R + PM +P N P+ P +A Q+
Sbjct: 1468 VAF-DSFEFEKLKMQEHSNSDCNRKIQ--PMKMKPKNVCSPCIKPVSDLPQFQIKASEQQ 1524
Query: 430 RLLTIENGSPVTNSQNGGISPMVTVKTAKSRLFEMCAASYWKAPVFECVKEEGESHLKSF 251
++ GG+ + T K+R++E+CAA+YWK P FEC KEEG SHLK F
Sbjct: 1525 PHEIVQ----------GGVQKVST----KARMYEICAANYWKPPSFECCKEEGPSHLKLF 1570
Query: 250 TVKVTVEILDNPCTILECFSDPRPXXXXXXXXXXXXALWYLQQQ 119
TVK+T++I D +LEC+ P+ A+ YL+Q+
Sbjct: 1571 TVKLTMKIEDGSGLLLECYGYPKSTKKAAADSAAEGAIAYLKQE 1614
>emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 116 bits (290), Expect = 6e-24
Identities = 79/224 (35%), Positives = 111/224 (49%), Gaps = 5/224 (2%)
Frame = -3
Query: 775 TGCGINLSKKAAMRTAACQIISKLKDQGIRPXXXXXXXXXXXXXXKQEAKLIGYDETPTQ 596
T N ++K A R A+ Q+ KLKDQG K EAKLIGYDE P
Sbjct: 1410 TASATNANRKDARRIASNQLFKKLKDQGYM-LHSESLEEVLKSSSKMEAKLIGYDEKPID 1468
Query: 595 VVFLDEIQLENLRIRESSPTSGERTVDTVPMNREPANA-----HPIGRRPMSVTEAPAQR 431
V F D + E L+++E S + R + PM +P N P+ P +A Q+
Sbjct: 1469 VAF-DSFEFEKLKMQEHSNSDCNRKIQ--PMKMKPKNVCSPCIKPVSDLPQFQIKASEQQ 1525
Query: 430 RLLTIENGSPVTNSQNGGISPMVTVKTAKSRLFEMCAASYWKAPVFECVKEEGESHLKSF 251
++ GG+ + T K+R++E+CAA+YWK P FEC KEEG SHLK F
Sbjct: 1526 PHEIVQ----------GGVQKVST----KARMYEICAANYWKPPSFECCKEEGPSHLKLF 1571
Query: 250 TVKVTVEILDNPCTILECFSDPRPXXXXXXXXXXXXALWYLQQQ 119
TVK+T++I D +LEC+ P+ A+ YL+Q+
Sbjct: 1572 TVKLTMKIEDGSGLLLECYGYPKSTKKAAADSAAEGAIAYLKQE 1615
>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
[Ricinus communis]
Length = 1633
Score = 113 bits (282), Expect = 5e-23
Identities = 86/226 (38%), Positives = 108/226 (47%), Gaps = 14/226 (6%)
Frame = -3
Query: 760 NLSKKAAMRTAACQIISKLKDQG-IRPXXXXXXXXXXXXXXKQEAKLIGYDETPTQVVFL 584
N +KK A+R A+ QII KLKDQG IR +AKLIGYDETP +
Sbjct: 1423 NSNKKEAIRIASEQIIVKLKDQGYIRKSNYLEEVLRSGQKT--DAKLIGYDETPIDITAH 1480
Query: 583 DEIQLENLRIRESSPTSGE---RTVDTVPMNREP----ANAHP------IGRRPMSVTEA 443
D I L+NL+I++ S + R++ + P AN P +G +P +
Sbjct: 1481 DPIGLQNLKIQDPSCSDFNPKIRSMSKLTNTCSPCFIAANIQPPSPSVMVGGQPSATVAY 1540
Query: 442 PAQRRLLTIENGSPVTNSQNGGISPMVTVKTAKSRLFEMCAASYWKAPVFECVKEEGESH 263
P S M +AKSRL ++CAA+ WK P+FEC EEG SH
Sbjct: 1541 PT---------------------SDMDKPTSAKSRLHDICAANCWKPPLFECCYEEGPSH 1579
Query: 262 LKSFTVKVTVEILDNPCTILECFSDPRPXXXXXXXXXXXXALWYLQ 125
LKSF+ KV VEI P ILECF PR ALWYLQ
Sbjct: 1580 LKSFSYKVIVEIEAAPDMILECFGAPREKKKAAAEHAAEGALWYLQ 1625
>ref|XP_002308384.1| dicer-like protein [Populus trichocarpa] gi|222854360|gb|EEE91907.1|
dicer-like protein [Populus trichocarpa]
Length = 1588
Score = 108 bits (271), Expect = 1e-21
Identities = 81/215 (37%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Frame = -3
Query: 760 NLSKKAAMRTAACQIISKLKDQGIRPXXXXXXXXXXXXXXKQEAKLIGYDETPTQVVFLD 581
N +KK A+R A+ +I ++LKDQG+ P EAKLIGYDETP V LD
Sbjct: 1396 NSNKKEAIRMASEKIYARLKDQGLIPMTNSLEEVLRNSQK-MEAKLIGYDETPIDVA-LD 1453
Query: 580 EIQLENLRIRESSPTSGERTV-DTVPMNREPANAHPIGRRPMSVTEAPAQRRLLTIENGS 404
EN +I+E + V D+ P E +A + P+ T
Sbjct: 1454 AHGFENSKIQEPFGINCSYEVRDSCPPRFEAVDAWSLS--PLDFT--------------- 1496
Query: 403 PVTNSQNGGISPMVTVKTAKSRLFEMCAASYWKAPVFECVKEEGESHLKSFTVKVTVEIL 224
GG V + TA+SRL E+CAA+ WK P FEC EEG SHLKSFT KV VEI
Sbjct: 1497 -------GGQPSKVDLGTARSRLREICAANSWKPPSFECCTEEGPSHLKSFTYKVVVEIE 1549
Query: 223 DNPCTILECFSDPRPXXXXXXXXXXXXALWYLQQQ 119
+ P EC P+ ALWYL+ Q
Sbjct: 1550 EAPEMSFECVGSPQMKKKAAAEDAAEGALWYLKHQ 1584
>ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like [Cucumis
sativus]
Length = 1228
Score = 103 bits (257), Expect = 4e-20
Identities = 72/218 (33%), Positives = 100/218 (45%)
Frame = -3
Query: 775 TGCGINLSKKAAMRTAACQIISKLKDQGIRPXXXXXXXXXXXXXXKQEAKLIGYDETPTQ 596
T N KK A + AA I++KLK +G P E KLIGYDETP+
Sbjct: 999 TASAANRRKKDAAKIAANLILTKLKAKGFIPEVNSLEEILKSSKK-MEPKLIGYDETPSI 1057
Query: 595 VVFLDEIQLENLRIRESSPTSGERTVDTVPMNREPANAHPIGRRPMSVTEAPAQRRLLTI 416
+ + L + E S + + V N EP I + +S + ++
Sbjct: 1058 TIDQVDNGHRTLNVLEFSSEHSDPRMHCVVDNSEPVRITRISKMLVSSSRTAGEQLKPAF 1117
Query: 415 ENGSPVTNSQNGGISPMVTVKTAKSRLFEMCAASYWKAPVFECVKEEGESHLKSFTVKVT 236
E T+ Q + TA+SRL+E+CAA++W P F+C+ EEG SHLK FT KV
Sbjct: 1118 EGHDSPTDLQVISVGRSGKT-TARSRLYEVCAANHWNRPSFDCMNEEGPSHLKMFTYKVV 1176
Query: 235 VEILDNPCTILECFSDPRPXXXXXXXXXXXXALWYLQQ 122
+EI + P TI E F P ALWYL++
Sbjct: 1177 LEIEEAPDTIFEFFGAPHLKKKAAAEHAAEAALWYLEK 1214