BLASTX nr result

ID: Cimicifuga21_contig00022524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022524
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGG19195.1| thioredoxin H-type 4, partial [Tamarix hispida]         65   6e-09
ref|NP_001236052.1| uncharacterized protein LOC100527691 [Glycin...    65   8e-09
ref|NP_001237440.1| thioredoxin [Glycine max] gi|46326970|gb|AAS...    64   2e-08
gb|ACU15762.1| unknown [Glycine max]                                   64   2e-08
pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 Fro...    63   2e-08

>gb|AGG19195.1| thioredoxin H-type 4, partial [Tamarix hispida]
          Length = 137

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/47 (57%), Positives = 35/47 (74%)
 Frame = -3

Query: 144 SKESRVRAFHTTNEWKKHLDNIKGSYPLMVIDFTASWCTPCKFIEPA 4
           S  S V +FH+ N W+ HL++ K S  L+V+DFTASWC PCKF+EPA
Sbjct: 24  SDSSLVMSFHSANRWQLHLNSAKESNQLLVVDFTASWCGPCKFMEPA 70


>ref|NP_001236052.1| uncharacterized protein LOC100527691 [Glycine max]
           gi|255632962|gb|ACU16835.1| unknown [Glycine max]
          Length = 126

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -3

Query: 180 SSFQTYSHPYGSSKESRVRAFHTTNEWKKHLDNIKGSYPLMVIDFTASWCTPCKFIEP 7
           ++F T+     SS  S V  FH+T +WK H D  K +  LMVIDFTA+WC PCK+++P
Sbjct: 3   ANFSTFEFVEKSSHSSLVLTFHSTAKWKAHFDASKETNKLMVIDFTATWCGPCKYMDP 60


>ref|NP_001237440.1| thioredoxin [Glycine max] gi|46326970|gb|AAS88427.1| thioredoxin
           [Glycine max]
          Length = 135

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -3

Query: 144 SKESRVRAFHTTNEWKKHLDNIKGSYPLMVIDFTASWCTPCKFIEPA 4
           S  SRV++FH++  W+ H + +K +  L+VIDF+ASWC PCKFIEPA
Sbjct: 22  SSASRVQSFHSSARWQLHFNELKETNKLVVIDFSASWCGPCKFIEPA 68


>gb|ACU15762.1| unknown [Glycine max]
          Length = 157

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -3

Query: 144 SKESRVRAFHTTNEWKKHLDNIKGSYPLMVIDFTASWCTPCKFIEPA 4
           S  SRV++FH++  W+ H + +K +  L+VIDF+ASWC PCKFIEPA
Sbjct: 44  SSASRVQSFHSSARWQLHFNELKETNKLVVIDFSASWCGPCKFIEPA 90


>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
           Cppc Active Site Variant
          Length = 113

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -3

Query: 144 SKESRVRAFHTTNEWKKHLDNIKGSYPLMVIDFTASWCTPCKFIEPAF 1
           ++E +V A HT + WK+H +  KGS  L+V+DFTASWC PCK I P F
Sbjct: 1   AEEGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIF 48


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