BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022522
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   174   4e-43
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   155   4e-38
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   163   5e-38
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...   121   1e-28
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...   129   8e-28

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score =  174 bits (441), Expect(2) = 4e-43
 Identities = 97/230 (42%), Positives = 135/230 (58%)
 Frame = -3

Query: 690 QNTTYFHCLAKLRSSRTIIKEIQNQEGELLVDQEEIGSYIVDHYAFEFQRKHHDIDESLQ 511
           +NT YFH L K+++   II  ++  E E+L DQ  I  +  DH   E             
Sbjct: 115 RNTKYFHRLTKIKNKTKIISSLRKGE-EILTDQTRISEH--DHLLVE------------- 158

Query: 510 RHIHKIVIDQDNAILTKFPSPEEINNVDFDLNLDSAPGLNGFGGDFYLLCWHIISKDLIP 331
             I K+V    N +LT  P+ EE+ N  FDLN D APG + FG  F+ + W+I+ KD+  
Sbjct: 159 EAIPKLVDATTNRLLTMLPTKEEVKNAVFDLNSDDAPGPDVFGACFFQIYWNIVKKDVYE 218

Query: 330 AVMKFFQQTRVAASFNSSFLVLIPKEPNANKVQKFRPIFLSNLAFKIIPKILASRLRPLA 151
           AV+ FF+   +  +FN++ ++LIPK PNA+ V ++R I L N  FKII K+LA RL  + 
Sbjct: 219 AVLDFFKNGWLPNNFNANSIILIPKTPNADSVDQYRTIALVNFKFKIINKVLADRLAKIL 278

Query: 150 KQIISKEQIGFIPNRNIHEAIGLASECVNDLGLKVYGGNLGRKLDITQAF 1
             IISKEQ GF+  RNI + I L SE +N L  K +GGNL  K+D+T+AF
Sbjct: 279 PSIISKEQRGFVQGRNIRDCIALTSEAINVLDNKSFGGNLALKIDVTKAF 328



 Score = 27.3 bits (59), Expect(2) = 4e-43
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 764 VELILQQEADLWKQKASIRWDNEGDK 687
           ++L LQ++   W +KA ++W   GD+
Sbjct: 90  LDLALQKQETFWVEKAKLKWHVGGDR 115


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  155 bits (392), Expect(2) = 4e-38
 Identities = 89/230 (38%), Positives = 128/230 (55%)
 Frame = -3

Query: 690 QNTTYFHCLAKLRSSRTIIKEIQNQEGELLVDQEEIGSYIVDHYAFEFQRKHHDIDESLQ 511
           +NT YFH + K++++  +I  +++ E   L D  +I                        
Sbjct: 73  RNTAYFHRVTKIKNTTKLITLLRDGE-HTLTDPNQIA----------------------- 108

Query: 510 RHIHKIVIDQDNAILTKFPSPEEINNVDFDLNLDSAPGLNGFGGDFYLLCWHIISKDLIP 331
                      N  LT  PS +EI    F LN DSAPG +GFG  FY + W I+ +D+I 
Sbjct: 109 -----------NHALTMIPSNDEIKQAVFSLNNDSAPGPDGFGSCFYQIYWDIVKEDVIK 157

Query: 330 AVMKFFQQTRVAASFNSSFLVLIPKEPNANKVQKFRPIFLSNLAFKIIPKILASRLRPLA 151
           AV++FF    +  +FN++ L+LIPK  NA+ + +FRPI ++N  FKII KILA RL  + 
Sbjct: 158 AVLQFFNTGWILPNFNANTLILIPKTQNADSMDQFRPIAMANFKFKIISKILADRLAQIM 217

Query: 150 KQIISKEQIGFIPNRNIHEAIGLASECVNDLGLKVYGGNLGRKLDITQAF 1
             I+S+EQ GFI  RNI + + LASE +N L  K +GGNL  K+DI++AF
Sbjct: 218 PNIVSQEQRGFIQGRNIKDCVCLASEAINMLDQKSFGGNLAFKVDISKAF 267



 Score = 29.3 bits (64), Expect(2) = 4e-38
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 764 VELILQQEADLWKQKASIRWDNEGDK 687
           ++L L +E   W +K+ ++W+ EGD+
Sbjct: 48  LDLALNKEETFWFEKSKVKWNMEGDR 73


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  163 bits (412), Expect = 5e-38
 Identities = 93/231 (40%), Positives = 138/231 (59%), Gaps = 1/231 (0%)
 Frame = -3

Query: 690  QNTTYFHCLAKLRSSRTIIKEIQNQEGELLVDQEEIGSYIVDHYAFEFQRKHHDIDESLQ 511
            +NT YFH ++K+R+++  I  +Q+ +  ++ D   I  ++++++   F   +  I   L 
Sbjct: 364  RNTAYFHRISKVRATKNTISFLQDGDA-VITDPARIEVHVLNYFQAIFSVDNSCIQNDLV 422

Query: 510  RH-IHKIVIDQDNAILTKFPSPEEINNVDFDLNLDSAPGLNGFGGDFYLLCWHIISKDLI 334
               I  +V + DN  L + P   E+ N  F LN D APG NGFGG FY   W I+  D+I
Sbjct: 423  VDTIPSLVSNVDNNSLLRLPLWGEVKNAVFTLNGDGAPGPNGFGGHFYQTYWDIVGADVI 482

Query: 333  PAVMKFFQQTRVAASFNSSFLVLIPKEPNANKVQKFRPIFLSNLAFKIIPKILASRLRPL 154
             +V  FF   ++A + NS+ +VLIPK P A  +  +RPI L+N  FKII KILA RL  +
Sbjct: 483  QSVQDFFISGQLAQNINSNLIVLIPKVPGARVMGDYRPIALANFQFKIISKILADRLADI 542

Query: 153  AKQIISKEQIGFIPNRNIHEAIGLASECVNDLGLKVYGGNLGRKLDITQAF 1
              +IIS EQ GFI +R+I + + LASE +N L  + YGGN+  K+DI +AF
Sbjct: 543  TMRIISVEQRGFIRDRDISKCVILASEAINLLEKRQYGGNVALKVDIAKAF 593


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score =  121 bits (304), Expect(2) = 1e-28
 Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 5/216 (2%)
 Frame = -3

Query: 690  QNTTYFHCLAKLRSSRTIIKEIQNQEGELLVDQEEIGSYIVDHYAFEFQRKHHDIDESLQ 511
            +NT YFH  A  R+ + +IK+++  +G +   +EE+G       A  F R  +  DESL 
Sbjct: 602  RNTRYFHLKASWRARKNLIKKLRRSDGMMCSKEEELGEI-----ARSFFRDLYTKDESLN 656

Query: 510  -----RHIHKIVIDQDNAILTKFPSPEEINNVDFDLNLDSAPGLNGFGGDFYLLCWHIIS 346
                       + D+ N +LTK  + EEI++  F +    APG +GF   F+   W ++ 
Sbjct: 657  PGELLNMFEPKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGFPARFFQRNWGVLK 716

Query: 345  KDLIPAVMKFFQQTRVAASFNSSFLVLIPKEPNANKVQKFRPIFLSNLAFKIIPKILASR 166
            +D+I  V +FF+        N + +V+IPK     +++ FRP+ L N+ +K++ K L +R
Sbjct: 717  RDVIEGVREFFETGEWKEGMNDTVIVMIPKTNAPVEMKDFRPVSLCNVIYKVVAKCLVNR 776

Query: 165  LRPLAKQIISKEQIGFIPNRNIHEAIGLASECVNDL 58
            LRPL ++IIS+ Q  F+P R I +   +A EC + +
Sbjct: 777  LRPLLQEIISETQSAFVPGRMITDNALVAFECFHSI 812



 Score = 31.2 bits (69), Expect(2) = 1e-28
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 809 GNEALANDIINQDVLVELILQQEADLWKQKASIRWDNEGDKIQHIF 672
           G E    D+    + ++ +L +E   WKQ++ I W  EGD+    F
Sbjct: 562 GREDSEPDVHRLKIFLQELLHREEIWWKQRSRITWLKEGDRNTRYF 607


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score =  129 bits (324), Expect = 8e-28
 Identities = 77/233 (33%), Positives = 126/233 (54%), Gaps = 4/233 (1%)
 Frame = -3

Query: 687  NTTYFHCLAKLRSSRTIIKEIQNQEGELLVDQEEIGSYIVDHY----AFEFQRKHHDIDE 520
            N ++FH + K R++R  I  +Q  +G LL +Q EI   I+D Y      E  + HH ID 
Sbjct: 566  NNSFFHAIIKSRNNRRNIYMLQKTDGTLLENQSEIEDEIMDFYKKLMGTEDSQLHH-IDI 624

Query: 519  SLQRHIHKIVIDQDNAILTKFPSPEEINNVDFDLNLDSAPGLNGFGGDFYLLCWHIISKD 340
               R+  ++ ++Q   +++   + ++I      +  D +PG++GFG  F+   W I+ +D
Sbjct: 625  DAMRNGKQVNMEQRRYLVSNI-TEQDIERALKGIGDDKSPGIDGFGAKFFKASWCIVKED 683

Query: 339  LIPAVMKFFQQTRVAASFNSSFLVLIPKEPNANKVQKFRPIFLSNLAFKIIPKILASRLR 160
            +I A+++FF   R+   FN+  + LIPK  NA  V+ + PI    + +KII KI+  RL 
Sbjct: 684  VIAAILEFFNIGRLYRGFNNIVVTLIPKGDNARYVKDYHPIVGCTIVYKIIAKIITERLG 743

Query: 159  PLAKQIISKEQIGFIPNRNIHEAIGLASECVNDLGLKVYGGNLGRKLDITQAF 1
             +   IIS  Q  F+P +NIH  I LA E +N  G K     +  +LD+ +A+
Sbjct: 744  KILPSIISHSQAAFVPGQNIHNHILLAYELLNGYGRKGGTPRVMMQLDLHKAY 796