BLASTX nr result

ID: Cimicifuga21_contig00022513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022513
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260...   166   3e-39
emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera]   166   3e-39
ref|XP_002517908.1| conserved hypothetical protein [Ricinus comm...   153   1e-35
ref|XP_002330688.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_003527430.1| PREDICTED: uncharacterized protein LOC100805...   142   3e-32

>ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260881 [Vitis vinifera]
          Length = 182

 Score =  166 bits (419), Expect = 3e-39
 Identities = 81/133 (60%), Positives = 99/133 (74%)
 Frame = +2

Query: 146 PKTSTPPSLLRRILSKRRTWVCLFVSVYALLLSCSWNILHSILDWYNSTTSLGSPSTSFG 325
           P++ +   L+  ILSKRRTWVCLF+ VYA LL  SWN+L +IL WYN++ S  SP +SFG
Sbjct: 21  PQSQSSHMLVLSILSKRRTWVCLFILVYAALLFFSWNLLKTILSWYNNSMSSSSPPSSFG 80

Query: 326 WPALYASVLFGVVFGLLSMXXXXXXXXXXTVVTWITILVLLTFAGKPRRALVLEGTKITK 505
           WPALYASVL GVVFGLLSM          T+VTWIT+LVLLTF GKPRR LV+EG  IT 
Sbjct: 81  WPALYASVLLGVVFGLLSMVAALAVAVPATLVTWITVLVLLTFCGKPRRTLVVEGRMITA 140

Query: 506 DILGFVARIVIRE 544
           +I GFV +I+++E
Sbjct: 141 EITGFVLKILLKE 153


>emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera]
          Length = 179

 Score =  166 bits (419), Expect = 3e-39
 Identities = 81/133 (60%), Positives = 99/133 (74%)
 Frame = +2

Query: 146 PKTSTPPSLLRRILSKRRTWVCLFVSVYALLLSCSWNILHSILDWYNSTTSLGSPSTSFG 325
           P++ +   L+  ILSKRRTWVCLF+ VYA LL  SWN+L +IL WYN++ S  SP +SFG
Sbjct: 18  PQSQSSHMLVLSILSKRRTWVCLFILVYAALLFFSWNLLKTILSWYNNSMSSSSPPSSFG 77

Query: 326 WPALYASVLFGVVFGLLSMXXXXXXXXXXTVVTWITILVLLTFAGKPRRALVLEGTKITK 505
           WPALYASVL GVVFGLLSM          T+VTWIT+LVLLTF GKPRR LV+EG  IT 
Sbjct: 78  WPALYASVLLGVVFGLLSMVAALAVAVPATLVTWITVLVLLTFCGKPRRTLVVEGRMITA 137

Query: 506 DILGFVARIVIRE 544
           +I GFV +I+++E
Sbjct: 138 EITGFVLKILLKE 150


>ref|XP_002517908.1| conserved hypothetical protein [Ricinus communis]
           gi|223542890|gb|EEF44426.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/135 (56%), Positives = 97/135 (71%)
 Frame = +2

Query: 140 QNPKTSTPPSLLRRILSKRRTWVCLFVSVYALLLSCSWNILHSILDWYNSTTSLGSPSTS 319
           Q  + S+  SL   ++SKRRTWVCLFV VY +LLS SWN+L S+L WY   + +   +TS
Sbjct: 13  QQQQPSSTYSLFITVMSKRRTWVCLFVLVYTILLSSSWNLLKSVLSWYKEQSQV---ATS 69

Query: 320 FGWPALYASVLFGVVFGLLSMXXXXXXXXXXTVVTWITILVLLTFAGKPRRALVLEGTKI 499
            GWPALYASVL G VFGLLSM          T+V WIT++VLL F GKPRRALV+EG KI
Sbjct: 70  SGWPALYASVLLGAVFGLLSMVAALAVAVPATLVIWITVVVLLAFFGKPRRALVIEGRKI 129

Query: 500 TKDILGFVARIVIRE 544
           T++I+GFV +I+++E
Sbjct: 130 TREIIGFVFKILLKE 144


>ref|XP_002330688.1| predicted protein [Populus trichocarpa] gi|222872292|gb|EEF09423.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  145 bits (366), Expect = 4e-33
 Identities = 73/120 (60%), Positives = 87/120 (72%)
 Frame = +2

Query: 185 LSKRRTWVCLFVSVYALLLSCSWNILHSILDWYNSTTSLGSPSTSFGWPALYASVLFGVV 364
           +SKRRTWVCLFV VYA+LLS SWN L +IL WY    S  S S   GWPALYASVL G V
Sbjct: 1   MSKRRTWVCLFVIVYAILLSSSWNWLKTILSWYKQQESQNSAS---GWPALYASVLLGAV 57

Query: 365 FGLLSMXXXXXXXXXXTVVTWITILVLLTFAGKPRRALVLEGTKITKDILGFVARIVIRE 544
           FGLLSM          T+V WIT++V+LTF GKPRR LV+EG KITK+I+GFV + +++E
Sbjct: 58  FGLLSMVAALAVAVPATLVIWITVVVMLTFFGKPRRVLVVEGRKITKEIIGFVFKTLLKE 117


>ref|XP_003527430.1| PREDICTED: uncharacterized protein LOC100805467 [Glycine max]
          Length = 174

 Score =  142 bits (358), Expect = 3e-32
 Identities = 74/139 (53%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
 Frame = +2

Query: 137 DQNPKTSTPP---SLLRRILSKRRTWVCLFVSVYALLLSCSWNILHSILDWYNSTTSLGS 307
           +Q  +   PP   +L+  I SKRRTW CLF+ VY  LL+ SWN+L S L WYN       
Sbjct: 6   EQQQQQQHPPYAYTLILNIFSKRRTWACLFLVVYGTLLASSWNLLKSTLSWYNLQVE--- 62

Query: 308 PSTSFGWPALYASVLFGVVFGLLSMXXXXXXXXXXTVVTWITILVLLTFAGKPRRALVLE 487
            ST+  WPALYASVL G VFG+LSM           VVTWITI+VLL F GKP+R LV+E
Sbjct: 63  SSTTSAWPALYASVLLGTVFGVLSMVAAMVVMVPAVVVTWITIVVLLAFFGKPKRTLVVE 122

Query: 488 GTKITKDILGFVARIVIRE 544
           G KITK+I GFV R +++E
Sbjct: 123 GRKITKEIFGFVMRTLLKE 141


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