BLASTX nr result

ID: Cimicifuga21_contig00022474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022474
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]    93   2e-17
ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|NP_001237237.1| uncharacterized protein LOC100306593 [Glycin...    77   1e-12

>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
 Frame = -1

Query: 421 KYWRRRSYQRLDGT---NSNNRIIRLGGKKKRGWRIRSVPKLRFSFKIASPMKMLKRLRD 251
           +YWRR+ YQR DG      N ++ R GG  +R W+I++VPKLR    IASP+K++ +L++
Sbjct: 14  RYWRRKRYQRFDGAITARKNIKVTRFGGSPRRVWKIKAVPKLRILKSIASPLKLMSKLKN 73

Query: 250 SYINMMIGLEGRFGALNGDNFFNAKRIXXXXXXXXXXXXXXXXXXELVFQICKSLMASRE 71
           +YINMM+G+ G    ++G N F  +R+                   LV++I K+L+A+RE
Sbjct: 74  AYINMMLGMAGN---VDGTNVFGNRRVPRGRQVKAPNYPSEAFEKRLVYEIYKNLLATRE 130

Query: 70  LA 65
           L+
Sbjct: 131 LS 132


>emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]
          Length = 113

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = -1

Query: 421 KYWRRRSYQRLDGTNSNN-RIIRLGGKKKRGWRIRSVPKLRFSFKIASPMKMLKRLRDSY 245
           ++WRR  YQRLD  N  N +++RLGGK++R WRIR +PKL    KI SP+K+L +L+++Y
Sbjct: 14  RHWRRGKYQRLDVANKRNVKMVRLGGKQRRFWRIRQIPKLHL--KIISPLKLLAKLKNAY 71

Query: 244 INMMIGLEGRFGALNGDNFFNAKRI 170
           ++MM+ L G  GALN  N F  KR+
Sbjct: 72  VSMMLNLSGSVGALNSGNVFGGKRV 96


>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
 Frame = -1

Query: 421 KYWRRRSYQRLDGT---NSNNRIIRLGGKKKRGWRIRSVPKLRFSFKIASPMKMLKRLRD 251
           +YWRR+ YQRLDG      N  + R GG  +R W+I++VPKLR    IASP K+L++L++
Sbjct: 14  RYWRRKRYQRLDGAITARKNTNVARFGGSPRRTWKIKAVPKLRILKNIASPTKLLRKLKN 73

Query: 250 SYINMMIGLEGRFGALNGDNFFNAKRIXXXXXXXXXXXXXXXXXXELVFQICKSLMASRE 71
           +YI+M++ + G     +G + F  KR+                   LV++I K+L+A+RE
Sbjct: 74  AYISMILSVAGN---ADGTHVFGDKRV-PRGRQVKAAYPSEAFEKRLVYEIYKNLLATRE 129

Query: 70  LA 65
           L+
Sbjct: 130 LS 131


>ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|222864955|gb|EEF02086.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
 Frame = -1

Query: 421 KYWRRRSYQRLDGTNSNN-RIIRLGGKKKRGWRIRSVPKLRFSFKIASPMKMLKRLRDSY 245
           +YWRR  YQRL+G +    +I RLG  ++  W++R+VPKL    +IASP+K+L +  D+Y
Sbjct: 14  RYWRRNRYQRLNGASKRKLKIARLGSGRR--WKLRAVPKLHM--EIASPIKLLAKFHDAY 69

Query: 244 INMMIGLEGRFGALNGDNFFNAKRIXXXXXXXXXXXXXXXXXXELVFQICKSLMASRELA 65
           I+MM+ L    G+LN   FF  K++                   L+ +I K L ASR+++
Sbjct: 70  IDMMLRLATNIGSLNNKGFFRGKKV-AKDQHISMVSSGDEVDSRLLLEIYKKLAASRDMS 128


>ref|NP_001237237.1| uncharacterized protein LOC100306593 [Glycine max]
           gi|255629003|gb|ACU14846.1| unknown [Glycine max]
          Length = 135

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
 Frame = -1

Query: 418 YWRRRSYQRLDGTNSNNR----IIRLGGKKKRGWRIRSVPKLRFSFKIASPMKMLKRLRD 251
           Y RRR Y+RL G  +  R    IIRL G + R WRIR+VP+LR+  +  SP+ +L +L++
Sbjct: 16  YLRRRRYRRLHGGATVVRRKMAIIRLRGPR-RYWRIRAVPRLRWVMR--SPLTILTKLKN 72

Query: 250 SYINMMIGLEGRFGALNGDNFFNAKRIXXXXXXXXXXXXXXXXXXELVFQICKSLMASRE 71
           +Y+N M+ L G  GA+N DN F  KRI                   L+F+I K+L+AS E
Sbjct: 73  AYMNFMLKLSGNVGAMNSDNIFEVKRI-PKARQVSKGYSRDEFEARLIFEISKTLVASYE 131

Query: 70  L 68
           L
Sbjct: 132 L 132


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