BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022228
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-16
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    89   5e-16
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...    87   1e-15

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = +2

Query: 2   DIDIDTYIKLSRQFQKSKMMKDAVELYELMMDSLYKPSEADCILLLGHISLEETPDLDLV 181
           ++DIDTYIK+SRQFQK+KM++DAV+LYE+MMD  YKPS  DC +LL  ISL   PDL LV
Sbjct: 297 EMDIDTYIKISRQFQKNKMLEDAVKLYEIMMDGPYKPSVQDCTMLLRSISLSSNPDLALV 356

Query: 182 FRVVKK 199
           FRV +K
Sbjct: 357 FRVTEK 362


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = +2

Query: 2   DIDIDTYIKLSRQFQKSKMMKDAVELYELMMDSLYKPSEADCILLLGHISLEETPDLDLV 181
           +IDIDTYIK+SRQFQKSKMM +AV+LYELMMD  YKPS  DC +LL  I+  + PDL LV
Sbjct: 290 EIDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLV 349

Query: 182 FRVVKK 199
           +RV KK
Sbjct: 350 YRVAKK 355


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/66 (65%), Positives = 53/66 (80%)
 Frame = +2

Query: 2   DIDIDTYIKLSRQFQKSKMMKDAVELYELMMDSLYKPSEADCILLLGHISLEETPDLDLV 181
           ++DIDTYIK+S++ QK+KMM+DAV+LYEL MD  YKPS  DC LLL  IS  + P+LDLV
Sbjct: 300 ELDIDTYIKISKKLQKNKMMEDAVKLYELTMDGSYKPSVKDCSLLLKSISASDDPNLDLV 359

Query: 182 FRVVKK 199
           FRV KK
Sbjct: 360 FRVSKK 365


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/66 (65%), Positives = 52/66 (78%)
 Frame = +2

Query: 2   DIDIDTYIKLSRQFQKSKMMKDAVELYELMMDSLYKPSEADCILLLGHISLEETPDLDLV 181
           ++DIDTYIK+SRQFQK+K+M DAV+LYE MMD  +KPS  DC +LL  IS    PDL+LV
Sbjct: 295 EMDIDTYIKISRQFQKNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLV 354

Query: 182 FRVVKK 199
           FRVV K
Sbjct: 355 FRVVNK 360


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g48250, chloroplastic; Flags: Precursor
           gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
           thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/66 (63%), Positives = 52/66 (78%)
 Frame = +2

Query: 2   DIDIDTYIKLSRQFQKSKMMKDAVELYELMMDSLYKPSEADCILLLGHISLEETPDLDLV 181
           D+D+DTYIK+SRQFQKS+MM + V+LYE MMD  +KPS  DC LLL ++S    PDLDLV
Sbjct: 295 DMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLV 354

Query: 182 FRVVKK 199
           FRV +K
Sbjct: 355 FRVSRK 360