BLASTX nr result

ID: Cimicifuga21_contig00022051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022051
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276406.1| PREDICTED: rubredoxin-like [Vitis vinifera]       214   3e-53
gb|ADN33910.1| rubredoxin [Cucumis melo subsp. melo]                  206   9e-51
emb|CAN65205.1| hypothetical protein VITISV_016717 [Vitis vinifera]   201   3e-49
ref|XP_004156449.1| PREDICTED: rubredoxin-like [Cucumis sativus]      199   7e-49
ref|XP_004139218.1| PREDICTED: LOW QUALITY PROTEIN: rubredoxin-l...   199   9e-49

>ref|XP_002276406.1| PREDICTED: rubredoxin-like [Vitis vinifera]
          Length = 200

 Score =  214 bits (544), Expect = 3e-53
 Identities = 110/185 (59%), Positives = 130/185 (70%), Gaps = 8/185 (4%)
 Frame = +3

Query: 189 MASATARPTFSFHL-----HXXXXXXXXXXXXXLNIPKTPLI---FRTRTLQFTTNSIDV 344
           MA AT RPTFSFHL                    ++PK P I    +    QF++ S+DV
Sbjct: 1   MACATTRPTFSFHLSTTLPQQSPPKPKPHLTFPPHLPKIPSISALHKPPKAQFSSRSVDV 60

Query: 345 SKQDKPISEDPDSTTAXXXXXXXXXXXXGKFDKRRLEERFAVLNTGVHECRSCGHLYNEA 524
           SK+DKP SE PDS+T               FDKRRLEE+FAVLNTG++ECRSCG+ Y+EA
Sbjct: 61  SKEDKPTSEQPDSSTPTSDSPPQEPE---NFDKRRLEEKFAVLNTGIYECRSCGYKYDEA 117

Query: 525 AGDPSYPIPPGMPFNQLPQDWRCPTCGAAQSFFQSKSVEIAGFAENQQFGLGANTLTSGQ 704
           AGDPSYPIPPG+ F++LP DWRCPTCGAA+SFF+SKSVEIAGFA+NQQFGLG NTLTSGQ
Sbjct: 118 AGDPSYPIPPGLQFDKLPDDWRCPTCGAARSFFESKSVEIAGFAQNQQFGLGGNTLTSGQ 177

Query: 705 KLILI 719
           K +LI
Sbjct: 178 KAVLI 182


>gb|ADN33910.1| rubredoxin [Cucumis melo subsp. melo]
          Length = 198

 Score =  206 bits (523), Expect = 9e-51
 Identities = 105/178 (58%), Positives = 124/178 (69%), Gaps = 4/178 (2%)
 Frame = +3

Query: 198 ATARPTFSFHLHXXXXXXXXXXXXX---LNIPKTPLIFRTRTLQ-FTTNSIDVSKQDKPI 365
           ++ARPT SFHL                   IP    +   R +  FT NSIDVSK+DKP 
Sbjct: 5   SSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKEDKPT 64

Query: 366 SEDPDSTTAXXXXXXXXXXXXGKFDKRRLEERFAVLNTGVHECRSCGHLYNEAAGDPSYP 545
           S+DP+  T              KFDKRRLEERFAVLNTG++ECRSCGH ++EA GDP+YP
Sbjct: 65  SDDPN--TPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDPTYP 122

Query: 546 IPPGMPFNQLPQDWRCPTCGAAQSFFQSKSVEIAGFAENQQFGLGANTLTSGQKLILI 719
           I PG+PF QLP+DWRCPTCGAA+SFF+SKSVEIAGFA+NQQ+GLG NTLTSGQK +LI
Sbjct: 123 IAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 180


>emb|CAN65205.1| hypothetical protein VITISV_016717 [Vitis vinifera]
          Length = 167

 Score =  201 bits (510), Expect = 3e-49
 Identities = 96/149 (64%), Positives = 115/149 (77%)
 Frame = +3

Query: 273 LNIPKTPLIFRTRTLQFTTNSIDVSKQDKPISEDPDSTTAXXXXXXXXXXXXGKFDKRRL 452
           L I     + +    QF++ S+DVSK+DKP SE PDS+T               FDKRRL
Sbjct: 4   LEIRNMEALHKPPKAQFSSRSVDVSKEDKPTSEQPDSSTPTLDSPPQEPE---NFDKRRL 60

Query: 453 EERFAVLNTGVHECRSCGHLYNEAAGDPSYPIPPGMPFNQLPQDWRCPTCGAAQSFFQSK 632
           EE+FAVLNTG++ECRSCG+ Y+EAAGDPSYPIPPG+ F++LP DWRCPTCGAA+SFF+SK
Sbjct: 61  EEKFAVLNTGIYECRSCGYKYDEAAGDPSYPIPPGLQFDKLPDDWRCPTCGAARSFFESK 120

Query: 633 SVEIAGFAENQQFGLGANTLTSGQKLILI 719
           SVEIAGFA+NQQFGLG NTLTSGQK +LI
Sbjct: 121 SVEIAGFAQNQQFGLGGNTLTSGQKAVLI 149


>ref|XP_004156449.1| PREDICTED: rubredoxin-like [Cucumis sativus]
          Length = 201

 Score =  199 bits (507), Expect = 7e-49
 Identities = 106/182 (58%), Positives = 127/182 (69%), Gaps = 8/182 (4%)
 Frame = +3

Query: 198 ATARPT-FSFHLHXXXXXXXXXXXXXLNIPKT---PLIFRTRTLQ----FTTNSIDVSKQ 353
           ++ARPT  SFHL                IP T   P + R+   +    FT NSIDVSK+
Sbjct: 5   SSARPTTLSFHLSQPSLPIPRFNFKP-PIPATAAIPPLLRSSAARPISIFTLNSIDVSKE 63

Query: 354 DKPISEDPDSTTAXXXXXXXXXXXXGKFDKRRLEERFAVLNTGVHECRSCGHLYNEAAGD 533
           DKP S+DP+  T              KFDKRRLEE+FAVLNTG++ECRSCGH ++EA GD
Sbjct: 64  DKPTSDDPN--TPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVGD 121

Query: 534 PSYPIPPGMPFNQLPQDWRCPTCGAAQSFFQSKSVEIAGFAENQQFGLGANTLTSGQKLI 713
           P+YPI PG+PF QLP+DWRCPTCGAA+SFF+SKSVEIAGFA+NQQ+GLG NTLTSGQK +
Sbjct: 122 PTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAV 181

Query: 714 LI 719
           LI
Sbjct: 182 LI 183


>ref|XP_004139218.1| PREDICTED: LOW QUALITY PROTEIN: rubredoxin-like [Cucumis sativus]
          Length = 201

 Score =  199 bits (506), Expect = 9e-49
 Identities = 106/182 (58%), Positives = 127/182 (69%), Gaps = 8/182 (4%)
 Frame = +3

Query: 198 ATARPT-FSFHLHXXXXXXXXXXXXXLNIPKT---PLIFRTRTLQ----FTTNSIDVSKQ 353
           ++ARPT  SFHL                IP T   P + R+   +    FT NSIDVSK+
Sbjct: 5   SSARPTTLSFHLSQPSLPIPRFNFKP-PIPATAAIPPLLRSSAARPISIFTLNSIDVSKE 63

Query: 354 DKPISEDPDSTTAXXXXXXXXXXXXGKFDKRRLEERFAVLNTGVHECRSCGHLYNEAAGD 533
           DKP S+DP+  T              KFDKRRLEE+FAVLNTG++ECRSCGH ++EA GD
Sbjct: 64  DKPTSDDPN--TPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAXGD 121

Query: 534 PSYPIPPGMPFNQLPQDWRCPTCGAAQSFFQSKSVEIAGFAENQQFGLGANTLTSGQKLI 713
           P+YPI PG+PF QLP+DWRCPTCGAA+SFF+SKSVEIAGFA+NQQ+GLG NTLTSGQK +
Sbjct: 122 PTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAV 181

Query: 714 LI 719
           LI
Sbjct: 182 LI 183


Top