BLASTX nr result
ID: Cimicifuga21_contig00022047
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022047
(1326 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus... 144 2e-48
ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [S... 129 1e-39
ref|NP_001050703.1| Os03g0626700 [Oryza sativa Japonica Group] g... 119 2e-39
gb|AFW84961.1| putative MATE efflux family protein [Zea mays] 122 6e-38
ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea ma... 122 6e-38
>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
gi|223541763|gb|EEF43311.1| multidrug resistance pump,
putative [Ricinus communis]
Length = 496
Score = 144 bits (363), Expect(3) = 2e-48
Identities = 64/115 (55%), Positives = 86/115 (74%)
Frame = +1
Query: 904 CGQRVGAGQMDMLGIYMQRSCXXXXXXXXXXXPIYVFASPILKFLRQSESISNLAGKYSL 1083
CGQ VGAGQ++MLG+YMQ+S P Y+FASP+L+ L Q + IS LAGKYS+
Sbjct: 102 CGQAVGAGQLNMLGVYMQKSWIITGVAALFLAPFYIFASPLLQLLHQDKDISELAGKYSI 161
Query: 1084 WFIHHVYAYALNFPMQKFFQFQSKVWVMILISIVVLAFHIWLNWILLTKLRHWLL 1248
W + ++A+A+NFP+QKF Q QS+VWVM +IS++ LAFH+ LNW+L+TKL H LL
Sbjct: 162 WVLPQLFAFAINFPIQKFLQAQSRVWVMTIISVIALAFHVLLNWLLVTKLDHGLL 216
Score = 52.4 bits (124), Expect(3) = 2e-48
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 705 DEPKKMWNITGLAILTAVAQFSIDFVTTTFVGDLGDIEL 821
DE K+MW I A++TAV QFSI FVT+ +VG LG++EL
Sbjct: 35 DESKRMWEIAAPAMITAVTQFSIGFVTSAYVGHLGEVEL 73
Score = 44.7 bits (104), Expect(3) = 2e-48
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2
Query: 818 VAAVSLVDNVIESFMYGIM*LGMGSALETVVKELV 922
+AAVS+V NVIE F+YG+M LGMGSALET+ + V
Sbjct: 73 LAAVSIVQNVIEGFVYGVM-LGMGSALETLCGQAV 106
>ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [Sorghum bicolor]
gi|241930528|gb|EES03673.1| hypothetical protein
SORBIDRAFT_03g035610 [Sorghum bicolor]
Length = 487
Score = 129 bits (325), Expect(3) = 1e-39
Identities = 61/115 (53%), Positives = 81/115 (70%)
Frame = +1
Query: 904 CGQRVGAGQMDMLGIYMQRSCXXXXXXXXXXXPIYVFASPILKFLRQSESISNLAGKYSL 1083
CGQ VGAGQ+ MLG+YMQRS P+YVF SPIL+ LRQS IS ++G+Y+
Sbjct: 87 CGQAVGAGQLQMLGVYMQRSWIICVATSLVLLPLYVFTSPILRLLRQSADISAVSGRYAR 146
Query: 1084 WFIHHVYAYALNFPMQKFFQFQSKVWVMILISIVVLAFHIWLNWILLTKLRHWLL 1248
W + ++AYA+NFPMQKF+Q QS+VWVM IS VLA H LNW+++++L L+
Sbjct: 147 WCVPQLFAYAVNFPMQKFYQAQSRVWVMTAISGAVLAVHALLNWLVVSRLGRGLV 201
Score = 45.8 bits (107), Expect(3) = 1e-39
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3
Query: 705 DEPKKMWNITGLAILTAVAQFSIDFVTTTFVGDLGDIEL 821
DE + +W + G ILT + QF + FVTT FVG +G +EL
Sbjct: 20 DECRNLWRVAGPVILTGIFQFLLGFVTTAFVGHIGKVEL 58
Score = 36.2 bits (82), Expect(3) = 1e-39
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2
Query: 818 VAAVSLVDNVIESFMYGIM*LGMGSALETVVKELV 922
+AAVS+V+ V+E +G++ LGMGSALET+ + V
Sbjct: 58 LAAVSIVNGVVEGLAFGLL-LGMGSALETLCGQAV 91
>ref|NP_001050703.1| Os03g0626700 [Oryza sativa Japonica Group]
gi|16924114|gb|AAL31693.1|AC092390_14 putative multidrug
efflux protein [Oryza sativa Japonica Group]
gi|37718791|gb|AAR01662.1| putative MATE efflux family
protein [Oryza sativa Japonica Group]
gi|108709922|gb|ABF97717.1| MATE efflux family protein,
expressed [Oryza sativa Japonica Group]
gi|113549174|dbj|BAF12617.1| Os03g0626700 [Oryza sativa
Japonica Group]
Length = 477
Score = 119 bits (298), Expect(4) = 2e-39
Identities = 60/115 (52%), Positives = 75/115 (65%)
Frame = +1
Query: 904 CGQRVGAGQMDMLGIYMQRSCXXXXXXXXXXXPIYVFASPILKFLRQSESISNLAGKYSL 1083
CGQ VGAGQ+ MLG+Y+QRS P YVF + IL LRQ I+ +AG Y+
Sbjct: 77 CGQAVGAGQVSMLGVYIQRSWIICGATAVILTPTYVFTAGILIGLRQPTDIAAVAGTYTR 136
Query: 1084 WFIHHVYAYALNFPMQKFFQFQSKVWVMILISIVVLAFHIWLNWILLTKLRHWLL 1248
W I ++AYA NFP+QKFFQ QSKVW M IS + LA H+ LN+I LT+L H L+
Sbjct: 137 WVIPQLFAYAANFPLQKFFQSQSKVWAMTAISGIALALHVVLNYIFLTRLGHGLV 191
Score = 46.2 bits (108), Expect(4) = 2e-39
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3
Query: 708 EPKKMWNITGLAILTAVAQFSIDFVTTTFVGDLGDIEL 821
E K +W+I AILTAV QFSI FVT FVG +G +EL
Sbjct: 11 ESKLLWHIAFPAILTAVFQFSIGFVTVGFVGHIGQVEL 48
Score = 42.0 bits (97), Expect(4) = 2e-39
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = +2
Query: 818 VAAVSLVDNVIESFMYGIM*LGMGSALETVVKELV 922
+AAV++V+NVIE F YG++ LGMGSALET+ + V
Sbjct: 48 LAAVTVVENVIEGFAYGVL-LGMGSALETLCGQAV 81
Score = 23.9 bits (50), Expect(4) = 2e-39
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 1239 LVAAAIAGNISLWNVI 1286
LVAAA+ GN++ W +I
Sbjct: 190 LVAAALIGNVTWWLII 205
>gb|AFW84961.1| putative MATE efflux family protein [Zea mays]
Length = 554
Score = 122 bits (307), Expect(3) = 6e-38
Identities = 56/110 (50%), Positives = 76/110 (69%)
Frame = +1
Query: 904 CGQRVGAGQMDMLGIYMQRSCXXXXXXXXXXXPIYVFASPILKFLRQSESISNLAGKYSL 1083
CGQ VGAGQ+ MLG+YMQRS P+YVF SP+L+ LRQS IS +AG+Y+
Sbjct: 149 CGQAVGAGQLQMLGVYMQRSWIICLATSLALLPLYVFTSPLLRMLRQSADISAVAGRYAR 208
Query: 1084 WFIHHVYAYALNFPMQKFFQFQSKVWVMILISIVVLAFHIWLNWILLTKL 1233
W + ++AYA+NFP+QKF+Q QS+VW M IS LA H L+W+++ +L
Sbjct: 209 WCVPQLFAYAVNFPIQKFYQAQSRVWAMTAISGAALAVHALLSWLVVARL 258
Score = 47.0 bits (110), Expect(3) = 6e-38
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3
Query: 681 HLQWC*S*DEPKKMWNITGLAILTAVAQFSIDFVTTTFVGDLGDIEL 821
H +W DE + +W + G ILT + QF + FVTT FVG +G +EL
Sbjct: 77 HKKWS---DECRNLWRVAGPVILTGIFQFLLGFVTTAFVGHIGKVEL 120
Score = 36.2 bits (82), Expect(3) = 6e-38
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2
Query: 818 VAAVSLVDNVIESFMYGIM*LGMGSALETVVKELV 922
+AAVS+V+ V+E +G++ LGMGSALET+ + V
Sbjct: 120 LAAVSIVNGVVEGLAFGLL-LGMGSALETLCGQAV 153
>ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea mays]
gi|219888227|gb|ACL54488.1| unknown [Zea mays]
Length = 490
Score = 122 bits (307), Expect(3) = 6e-38
Identities = 56/110 (50%), Positives = 76/110 (69%)
Frame = +1
Query: 904 CGQRVGAGQMDMLGIYMQRSCXXXXXXXXXXXPIYVFASPILKFLRQSESISNLAGKYSL 1083
CGQ VGAGQ+ MLG+YMQRS P+YVF SP+L+ LRQS IS +AG+Y+
Sbjct: 85 CGQAVGAGQLQMLGVYMQRSWIICLATSLALLPLYVFTSPLLRMLRQSADISAVAGRYAR 144
Query: 1084 WFIHHVYAYALNFPMQKFFQFQSKVWVMILISIVVLAFHIWLNWILLTKL 1233
W + ++AYA+NFP+QKF+Q QS+VW M IS LA H L+W+++ +L
Sbjct: 145 WCVPQLFAYAVNFPIQKFYQAQSRVWAMTAISGAALAVHALLSWLVVARL 194
Score = 47.0 bits (110), Expect(3) = 6e-38
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3
Query: 681 HLQWC*S*DEPKKMWNITGLAILTAVAQFSIDFVTTTFVGDLGDIEL 821
H +W DE + +W + G ILT + QF + FVTT FVG +G +EL
Sbjct: 13 HKKWS---DECRNLWRVAGPVILTGIFQFLLGFVTTAFVGHIGKVEL 56
Score = 36.2 bits (82), Expect(3) = 6e-38
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2
Query: 818 VAAVSLVDNVIESFMYGIM*LGMGSALETVVKELV 922
+AAVS+V+ V+E +G++ LGMGSALET+ + V
Sbjct: 56 LAAVSIVNGVVEGLAFGLL-LGMGSALETLCGQAV 89