BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021985
         (1872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi...    87   9e-18
emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]    87   1e-17
ref|XP_002525134.1| pentatricopeptide repeat-containing protein,...    80   1e-14
ref|XP_002876469.1| pentatricopeptide repeat-containing protein ...    87   2e-14
ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-14

>ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Vitis vinifera]
          Length = 921

 Score = 87.4 bits (215), Expect(2) = 9e-18
 Identities = 47/88 (53%), Positives = 59/88 (67%)
 Frame = +2

Query: 251 QILPHNCTFVSLLNVNTKL*YLAFESSIHRHIIKMDSICCDMVVCNLLVIM*AQCGSIES 430
           QI P N T VSLL+V TKL  LA  SSIH  IIK D   CD  V N+L+ M  +CG IES
Sbjct: 578 QIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIES 637

Query: 431 FIKVFNHMSRKNLISWTTLISGLRLHGY 514
            +K+FN +  +N+I+WT LIS L ++GY
Sbjct: 638 SLKIFNKIIERNIITWTALISALGVNGY 665



 Score = 30.8 bits (68), Expect(2) = 9e-18
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 198 LIAASTRSGDYRRAFEMFKY 257
           LIAA  R+GDY+  FE+FK+
Sbjct: 554 LIAACARNGDYKEVFELFKH 573


>emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]
          Length = 954

 Score = 87.0 bits (214), Expect(2) = 1e-17
 Identities = 47/88 (53%), Positives = 59/88 (67%)
 Frame = +2

Query: 251 QILPHNCTFVSLLNVNTKL*YLAFESSIHRHIIKMDSICCDMVVCNLLVIM*AQCGSIES 430
           QI P N T VSLL+V TKL  LA  SSIH  IIK D   CD  V N+L+ M  +CG IES
Sbjct: 578 QIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIES 637

Query: 431 FIKVFNHMSRKNLISWTTLISGLRLHGY 514
            +K+FN +  +N+I+WT LIS L ++GY
Sbjct: 638 SLKIFNKIIXRNIITWTALISALGVNGY 665



 Score = 30.8 bits (68), Expect(2) = 1e-17
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 198 LIAASTRSGDYRRAFEMFKY 257
           LIAA  R+GDY+  FE+FK+
Sbjct: 554 LIAACARNGDYKEVFELFKH 573


>ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535593|gb|EEF37261.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 792

 Score = 80.5 bits (197), Expect(2) = 1e-14
 Identities = 43/102 (42%), Positives = 63/102 (61%)
 Frame = +2

Query: 251 QILPHNCTFVSLLNVNTKL*YLAFESSIHRHIIKMDSICCDMVVCNLLVIM*AQCGSIES 430
           QI P N T+VSLL+ ++++  LA  SSIH  +IK +   CD  VCN+L+ M  +CG + S
Sbjct: 540 QIHPDNYTYVSLLSSSSQICDLALGSSIHGFLIKNNFSSCDTFVCNVLLDMYGKCGCLRS 599

Query: 431 FIKVFNHMSRKNLISWTTLISGLRLHGYPSMTWGVTKNMYHR 556
            +K+FN M  +NLI+WT LIS L ++          K+M H+
Sbjct: 600 SVKIFNSMRDRNLITWTALISALGINSCAHEALERFKDMEHQ 641



 Score = 27.3 bits (59), Expect(2) = 1e-14
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 201 IAASTRSGDYRRAFEMFKYCL 263
           IAA  R+G+Y+  FE+FK  L
Sbjct: 517 IAACARNGNYKEVFELFKQML 537


>ref|XP_002876469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322307|gb|EFH52728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score = 86.7 bits (213), Expect(2) = 2e-14
 Identities = 46/87 (52%), Positives = 56/87 (64%)
 Frame = +2

Query: 254 ILPHNCTFVSLLNVNTKL*YLAFESSIHRHIIKMDSICCDMVVCNLLVIM*AQCGSIESF 433
           I P N TFVS+L++ +KL  L   SSIH  I K D  C D  VCN+L+ M  +CGSI S 
Sbjct: 541 IRPDNYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCVDTFVCNVLIDMYGKCGSIRSV 600

Query: 434 IKVFNHMSRKNLISWTTLISGLRLHGY 514
           IKVF     KNLI+WT LIS L ++GY
Sbjct: 601 IKVFEETREKNLITWTALISSLGIYGY 627



 Score = 20.4 bits (41), Expect(2) = 2e-14
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 201 IAASTRSGDYRRAFEMFKYCL 263
           IAA +RS ++    ++FK+ L
Sbjct: 517 IAACSRSDNHGEVIDLFKHML 537


>ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|222862901|gb|EEF00408.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score = 78.6 bits (192), Expect(2) = 4e-14
 Identities = 41/87 (47%), Positives = 61/87 (70%)
 Frame = +2

Query: 251 QILPHNCTFVSLLNVNTKL*YLAFESSIHRHIIKMDSICCDMVVCNLLVIM*AQCGSIES 430
           Q+LP N T+ SLL V++K+  LA  SSIH  +IK +    D+VV N+L+ M  +CG++ES
Sbjct: 539 QMLPDNYTYTSLLCVSSKVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDMYGKCGNLES 598

Query: 431 FIKVFNHMSRKNLISWTTLISGLRLHG 511
             K+F+ M+ +NLI+WT LIS L ++G
Sbjct: 599 SAKIFDSMTERNLITWTALISALGING 625



 Score = 27.3 bits (59), Expect(2) = 4e-14
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 198 LIAASTRSGDYRRAFEMFKYCLTIALL 278
           +IAA  R+G+Y   FE+FK+     +L
Sbjct: 515 VIAACARNGNYNEVFELFKHMRVAQML 541