BLASTX nr result

ID: Cimicifuga21_contig00021968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021968
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276395.2| PREDICTED: uncharacterized protein LOC100244...   172   6e-41
emb|CAN65086.1| hypothetical protein VITISV_035031 [Vitis vinifera]   172   6e-41
ref|XP_002518779.1| hypothetical protein RCOM_0813700 [Ricinus c...   126   5e-27
ref|XP_002519314.1| telomeric repeat binding protein, putative [...   125   1e-26
ref|XP_002319963.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-25

>ref|XP_002276395.2| PREDICTED: uncharacterized protein LOC100244907 [Vitis vinifera]
           gi|297745761|emb|CBI15817.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score =  172 bits (436), Expect = 6e-41
 Identities = 90/185 (48%), Positives = 125/185 (67%)
 Frame = -1

Query: 560 QWILEFLLRQPIEDSLMIRLISALCPSINDPRLIKTLILRKVYSEIKKGMISEMTLESLE 381
           +WILEF++R+PI DSL+ RLIS L  S + PR+ KT++LRK+ SEI  G +SE  LE LE
Sbjct: 7   RWILEFMIRKPIGDSLVRRLISILPLSNSHPRMKKTVLLRKIESEISDGSVSETILELLE 66

Query: 380 LIEEIDYLKGVRVLDSMKESYCLVAMDCTVKFLKMNPKNFSEYIKAIDRIWRGRMLDLER 201
           +IEE+DY +GV VLDSMK +YC VA++CTVKFL  +     +Y  A+ RIWRG++  +E 
Sbjct: 67  IIEELDYKEGVAVLDSMKNAYCAVAVECTVKFLVGSGGKEGKYFDAVKRIWRGKIHKMES 126

Query: 200 GKEVPLALHWAQDLRSELEKAVHDDSVCEHLSMEDTRNEALKSLGMFMEEVTEKMGPPFL 21
                L     +  R ++E AV D  VCE +  ++TRN+AL+ +  ++ E    MGPPFL
Sbjct: 127 SATAGLVSDQLRKWRDDIEAAVWDARVCEDILAKNTRNDALRLVRAYVAEAWAIMGPPFL 186

Query: 20  ELAAK 6
           ELAA+
Sbjct: 187 ELAAR 191


>emb|CAN65086.1| hypothetical protein VITISV_035031 [Vitis vinifera]
          Length = 444

 Score =  172 bits (436), Expect = 6e-41
 Identities = 90/185 (48%), Positives = 125/185 (67%)
 Frame = -1

Query: 560 QWILEFLLRQPIEDSLMIRLISALCPSINDPRLIKTLILRKVYSEIKKGMISEMTLESLE 381
           +WILEF++R+PI DSL+ RLIS L  S + PR+ KT++LRK+ SEI  G +SE  LE LE
Sbjct: 7   RWILEFMIRKPIGDSLVRRLISILPLSNSHPRMKKTVLLRKIESEISDGSVSETILELLE 66

Query: 380 LIEEIDYLKGVRVLDSMKESYCLVAMDCTVKFLKMNPKNFSEYIKAIDRIWRGRMLDLER 201
           +IEE+DY +GV VLDSMK +YC VA++CTVKFL  +     +Y  A+ RIWRG++  +E 
Sbjct: 67  IIEELDYKEGVAVLDSMKNAYCAVAVECTVKFLVGSGGKEGKYFDAVKRIWRGKIHKMES 126

Query: 200 GKEVPLALHWAQDLRSELEKAVHDDSVCEHLSMEDTRNEALKSLGMFMEEVTEKMGPPFL 21
                L     +  R ++E AV D  VCE +  ++TRN+AL+ +  ++ E    MGPPFL
Sbjct: 127 SATAGLVSDQLRKWRDDIEAAVWDARVCEDILAKNTRNDALRLVRAYVAEAWAIMGPPFL 186

Query: 20  ELAAK 6
           ELAA+
Sbjct: 187 ELAAR 191


>ref|XP_002518779.1| hypothetical protein RCOM_0813700 [Ricinus communis]
           gi|223542160|gb|EEF43704.1| hypothetical protein
           RCOM_0813700 [Ricinus communis]
          Length = 478

 Score =  126 bits (316), Expect = 5e-27
 Identities = 74/188 (39%), Positives = 115/188 (61%), Gaps = 4/188 (2%)
 Frame = -1

Query: 557 WILEFLLRQPIEDSLMIRLISAL---CPSINDPRLIKTLILRKVYSEIKKGMISEMT-LE 390
           WILEFL RQPI   L+ ++++       SIN+PR  K L+LR ++ EI  G  S  T L+
Sbjct: 8   WILEFLARQPISQLLLNKILTNTHIPIASINNPRFKKALLLRSIHDEIANGSASSETILQ 67

Query: 389 SLELIEEIDYLKGVRVLDSMKESYCLVAMDCTVKFLKMNPKNFSEYIKAIDRIWRGRMLD 210
           SLE IEE+D      + DSMK +Y  VA+DCT+K++ +   +  ++ KA+ RIWRGR+  
Sbjct: 68  SLETIEELD---NTHIADSMKLAYQAVAVDCTLKWV-IEKHDKGQFFKAVKRIWRGRIER 123

Query: 209 LERGKEVPLALHWAQDLRSELEKAVHDDSVCEHLSMEDTRNEALKSLGMFMEEVTEKMGP 30
           LE  K+  L     ++++ E+E A+ D +  + L   + ++E+L+ +  ++ E  +K GP
Sbjct: 124 LESLKKSELVTDELKEIKQEIEAALWDSNARKRLLDRNIKSESLRLVKDYLNEALDKRGP 183

Query: 29  PFLELAAK 6
            FLELAAK
Sbjct: 184 SFLELAAK 191


>ref|XP_002519314.1| telomeric repeat binding protein, putative [Ricinus communis]
           gi|223541629|gb|EEF43178.1| telomeric repeat binding
           protein, putative [Ricinus communis]
          Length = 637

 Score =  125 bits (313), Expect = 1e-26
 Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 5/190 (2%)
 Frame = -1

Query: 557 WILEFLLRQPIEDSLMIR-LISALCPSINDP-RLIKTLILRKVYSEIKKGMISEMTLESL 384
           WI+E L+R+ + + L+ + L +   P  ND  RL KTL+LR + S+I  G +SE  L+SL
Sbjct: 11  WIMELLVRKELHEPLVKKFLTNPHLPLDNDNLRLKKTLLLRSIDSQISDGSVSETILDSL 70

Query: 383 ELIEEIDYLKGVRVLDSMKESYCLVAMDCTVKFLKMN---PKNFSEYIKAIDRIWRGRML 213
           E IEE+D    + + DSMK +YC VA++CTVK+L  N    ++  +Y++A+ RIWR R+ 
Sbjct: 71  EAIEELDRENHIIITDSMKAAYCAVAVECTVKYLWGNQHKSRSQGKYVEAVKRIWRDRIQ 130

Query: 212 DLERGKEVPLALHWAQDLRSELEKAVHDDSVCEHLSMEDTRNEALKSLGMFMEEVTEKMG 33
           +LE  K+  L     +  R ++E  + D    + L   +TRN AL   G ++ E    MG
Sbjct: 131 NLEMAKKSDLVTDELRKSRQKMEAVLLDSHRYKSLKELNTRNVALLLTGDYIHEAMALMG 190

Query: 32  PPFLELAAKT 3
           P FLEL A+T
Sbjct: 191 PSFLELVART 200


>ref|XP_002319963.1| predicted protein [Populus trichocarpa] gi|222858339|gb|EEE95886.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  120 bits (301), Expect = 3e-25
 Identities = 66/190 (34%), Positives = 116/190 (61%), Gaps = 5/190 (2%)
 Frame = -1

Query: 560 QWILEFLLRQPIEDSLMIR--LISALCPSIN-DPRLIKTLILRKVYSEIKKGMISEMTLE 390
           +W++EF+LRQ     L I   L +   P  N  PR  KTL+LR++ ++I+ G +SE TL+
Sbjct: 19  RWVIEFILRQLQIPVLTINKILTNRHVPLSNTSPRFKKTLLLRQIDADIEDGSVSEKTLD 78

Query: 389 SLELIEEIDYLKGVRVLDSMKESYCLVAMDCTVKFLKMNPKNF--SEYIKAIDRIWRGRM 216
           ++E++E+ID  +G  ++DSMK +YC VA++CTVK++  N +     ++++A++R+W+ R+
Sbjct: 79  AIEMVEQIDRNEGDLIMDSMKNAYCAVAVECTVKYMLGNLQRARKGKFLEAVERVWKNRV 138

Query: 215 LDLERGKEVPLALHWAQDLRSELEKAVHDDSVCEHLSMEDTRNEALKSLGMFMEEVTEKM 36
             L+R  +  L          E+E A+ DD V +     +TRNEA + + +++ E     
Sbjct: 139 AGLKREGKSELVTGKLMKYFEEMEVALKDDVVAKRWLKMNTRNEAAEMVRIYLGEAVAVS 198

Query: 35  GPPFLELAAK 6
           GP F+E+ A+
Sbjct: 199 GPVFVEMVAR 208


Top