BLASTX nr result

ID: Cimicifuga21_contig00021926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021926
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 ho...   142   3e-32
ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1...   128   6e-28
ref|XP_002511315.1| thyroid hormone receptor interactor, putativ...   122   3e-26
ref|XP_002867651.1| hypothetical protein ARALYDRAFT_492371 [Arab...   119   3e-25
ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 ho...   118   4e-25

>ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 homolog [Vitis vinifera]
           gi|297733699|emb|CBI14946.3| unnamed protein product
           [Vitis vinifera]
          Length = 455

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/113 (62%), Positives = 85/113 (75%)
 Frame = +1

Query: 172 MSTPMEITLPISNNEEALEPNGVPESVPSTHLTEDKILVSVEVCLKASSTARISDVQEAV 351
           MS PMEI+L  +   ++ + NGV ES+PS  LT++K+LVSVEVCLKASSTAR  DV+ AV
Sbjct: 1   MSEPMEISLQNATVGDSSDQNGVSESIPSPILTQEKVLVSVEVCLKASSTARSDDVRSAV 60

Query: 352 ERMLEKRSLSYAXXXXXXXXXXXFLLENVQRICICDTDEWVENHEILLFWQVK 510
           ERMLE RSLSY            FL+ENVQRICIC+TDEWVE H++LLFWQVK
Sbjct: 61  ERMLENRSLSYTDGSVPVSLDDPFLVENVQRICICETDEWVEKHDVLLFWQVK 113


>ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1|
           unknown [Populus trichocarpa]
           gi|222858748|gb|EEE96295.1| predicted protein [Populus
           trichocarpa]
          Length = 465

 Score =  128 bits (321), Expect = 6e-28
 Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 7/118 (5%)
 Frame = +1

Query: 178 TPMEITL--PISN---NEEALEPNGV--PESVPSTHLTEDKILVSVEVCLKASSTARISD 336
           +PM+IT+  PI     + +  + NGV  P S PS  LT  K LVSVEVCLK SSTAR+ D
Sbjct: 6   SPMDITIQNPIETTAISHDLSDGNGVALPSSSPSPILTHRKFLVSVEVCLKPSSTARVED 65

Query: 337 VQEAVERMLEKRSLSYAXXXXXXXXXXXFLLENVQRICICDTDEWVENHEILLFWQVK 510
           V+ AVERMLEKRSLSY            FL ENVQRIC+CDTDEWV NH+ILLFWQVK
Sbjct: 66  VRLAVERMLEKRSLSYVDGPIPVPFDDQFLFENVQRICVCDTDEWVTNHDILLFWQVK 123


>ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis]
           gi|223550430|gb|EEF51917.1| thyroid hormone receptor
           interactor, putative [Ricinus communis]
          Length = 460

 Score =  122 bits (306), Expect = 3e-26
 Identities = 67/114 (58%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
 Frame = +1

Query: 178 TPMEI-TLPISNNEEALEPNGVPESVPSTH--LTEDKILVSVEVCLKASSTARISDVQEA 348
           TPMEI TL  S      + NG  +  PS    L  DK LVSVEVCLK SSTAR+ D+Q A
Sbjct: 6   TPMEISTLNPSTELHISDQNGAAQLQPSPSPILHHDKYLVSVEVCLKPSSTARVEDIQSA 65

Query: 349 VERMLEKRSLSYAXXXXXXXXXXXFLLENVQRICICDTDEWVENHEILLFWQVK 510
           VERMLEKRSLSY            +L +NVQRICICD++EW +NHEILLFWQVK
Sbjct: 66  VERMLEKRSLSYVDGPIPVPVDDPYLSDNVQRICICDSEEWAKNHEILLFWQVK 119


>ref|XP_002867651.1| hypothetical protein ARALYDRAFT_492371 [Arabidopsis lyrata subsp.
           lyrata] gi|297313487|gb|EFH43910.1| hypothetical protein
           ARALYDRAFT_492371 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  119 bits (297), Expect = 3e-25
 Identities = 63/110 (57%), Positives = 74/110 (67%)
 Frame = +1

Query: 181 PMEITLPISNNEEALEPNGVPESVPSTHLTEDKILVSVEVCLKASSTARISDVQEAVERM 360
           P+E T  I       EP   P   P  H  E+K LVSVEVCLK SSTAR+ DVQ AVERM
Sbjct: 30  PIEATT-IPEQIAVAEPVATPNPPPCLH--ENKFLVSVEVCLKPSSTARLEDVQRAVERM 86

Query: 361 LEKRSLSYAXXXXXXXXXXXFLLENVQRICICDTDEWVENHEILLFWQVK 510
           LE RS+SYA           FL++NVQRICICDT+EWV+N+++LLFWQVK
Sbjct: 87  LETRSMSYADGLVLIPADDLFLVDNVQRICICDTEEWVKNNDVLLFWQVK 136


>ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 homolog [Cucumis sativus]
           gi|449487740|ref|XP_004157777.1| PREDICTED: pachytene
           checkpoint protein 2 homolog [Cucumis sativus]
          Length = 456

 Score =  118 bits (296), Expect = 4e-25
 Identities = 68/115 (59%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
 Frame = +1

Query: 172 MSTPMEITLPISNNEEAL-EPNGVP-ESVPSTHLTEDKILVSVEVCLKASSTARISDVQE 345
           MS PMEI+ P    E  + E NG+  ES  S+ + EDKILVSVEVCLK+SSTARI DV+ 
Sbjct: 1   MSAPMEISFPNPPLEAQMSESNGISSESAASSIVNEDKILVSVEVCLKSSSTARIEDVRL 60

Query: 346 AVERMLEKRSLSYAXXXXXXXXXXXFLLENVQRICICDTDEWVENHEILLFWQVK 510
           AVERMLEKRSLSY            FL ENV  I ICD+D+ V++H+ILLFWQVK
Sbjct: 61  AVERMLEKRSLSYVDGPIPVPLDDAFLTENVHGIRICDSDDGVQSHDILLFWQVK 115


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