BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021893
         (1508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16338.3| unnamed protein product [Vitis vinifera]              166   1e-38
emb|CAN64222.1| hypothetical protein VITISV_037395 [Vitis vinifera]   147   7e-33
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...   105   2e-20
ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2...    88   5e-15
gb|AFK41110.1| unknown [Lotus japonicus]                               87   1e-14

>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  166 bits (420), Expect = 1e-38
 Identities = 145/444 (32%), Positives = 204/444 (45%), Gaps = 15/444 (3%)
 Frame = -2

Query: 1369 MANVTRSGRKLKDDE-------NIXXXXXXXXXXXXXXXXXXXGLRRSARETPSKKQRAS 1211
            MAN +R+ RK KDD+       NI                    LRRSARETP+KK    
Sbjct: 1    MANDSRTSRKTKDDDINNSKGRNIRGKGSSTSASATTDISG---LRRSARETPTKKLLNP 57

Query: 1210 SPLSIRKSERIEKRTPPTPPIKKSSERVEKEITPSLLRRSERGENHR---SSDSRXXXXX 1040
            SP S RKSER+EK+TP TPP+K+ SERVEK+  PS  RRSERG+NH+   SS S+     
Sbjct: 58   SPSSTRKSERLEKQTPVTPPVKRKSERVEKQRMPSPSRRSERGKNHQSPSSSGSKKSEKT 117

Query: 1039 XXXXXXXXXXXXXXXXXKYITVNARDRNKDGEKERRPVRIVLGKKRLDARTYRESLLKPQ 860
                             K +T+ AR  +K+ E +   V++   KKR+DAR YR  L    
Sbjct: 118  SGSSEMRHKKQKREKSVKEVTLEARKVSKNEEHDLESVQV--KKKRMDARAYRALL---- 171

Query: 859  AKKIQKSDLSDKLKEHNETSQ---GDSYHMGXXXXXXXXXXXEGIARNRXXXXXXXXXXG 689
             +K+  +DL  K+++ ++  Q    DS   G            G  R             
Sbjct: 172  RRKVNDADLGGKMRKPDKLFQEDSSDSSDSGSKQVEDGRTECSG--RREDELKEKSQDRA 229

Query: 688  SDRAGEGLCSVLRKLEAGRSKNVGELELSHSSRKRKIHSDEFHESNNGDSLPVSKHSYKT 509
             +R  E     LR       +N G +              EF  S NG      K +++ 
Sbjct: 230  RERPAEESNCSLRTFTTEALENHGRV--------------EFSSSQNG----CLKGTFEH 271

Query: 508  LQSSPGVSAKEAVSVAEKVQMGCSAREN-SLKVSTGSTSEGRSISGDQCLEKGYTVSPFK 332
             + +P   AK     AE+++   S  E   +     STS  RS+ G      G  ++P K
Sbjct: 272  EERNPVEEAKGTTDNAERIETHSSPAEKLQMPELIDSTSNRRSLDGGD----GLKLTPVK 327

Query: 331  RKRKSEELDSDASVTAANEEIYSS-AYPVTSAPSESKMGSFLERCDVCSKRKRLEVDSMK 155
            RKR + +LDSDAS    +++I +  A  V+++P+       +E C VCSKR+RL+ DS  
Sbjct: 328  RKRNTLDLDSDASERVPSKDICTPIADAVSTSPTGCTTNKVVETCGVCSKRQRLDHDSPS 387

Query: 154  YNICSCNYGTNRDSCNNSSPEEVR 83
               CSCN   N+D  N+SS  + R
Sbjct: 388  QEFCSCNTKINQD-LNDSSAHKDR 410


>emb|CAN64222.1| hypothetical protein VITISV_037395 [Vitis vinifera]
          Length = 1179

 Score =  147 bits (371), Expect = 7e-33
 Identities = 133/421 (31%), Positives = 190/421 (45%), Gaps = 15/421 (3%)
 Frame = -2

Query: 1369 MANVTRSGRKLKDDE-------NIXXXXXXXXXXXXXXXXXXXGLRRSARETPSKKQRAS 1211
            MAN +R+ RK KDD+       NI                    LRRSARETP+KK    
Sbjct: 113  MANDSRTSRKTKDDDINNSKGRNIRGKGSSTSASATTDISG---LRRSARETPTKKLLNP 169

Query: 1210 SPLSIRKSERIEKRTPPTPPIKKSSERVEKEITPSLLRRSERGENHR---SSDSRXXXXX 1040
            SP S RKSER+EK+TP TPP+K+ SERVEK+  PS  RRSERG+NH+   SS S+     
Sbjct: 170  SPSSTRKSERLEKQTPVTPPVKRKSERVEKQRMPSPSRRSERGKNHQSPSSSGSKKSEKT 229

Query: 1039 XXXXXXXXXXXXXXXXXKYITVNARDRNKDGEKERRPVRIVLGKKRLDARTYRESLLKPQ 860
                             K +T+ AR  +K+ E +   V++   KKR+DAR YR  L    
Sbjct: 230  SGSSEMRHKKQKREKSVKEVTLEARKVSKNEEHDLESVQV--KKKRMDARAYRALL---- 283

Query: 859  AKKIQKSDLSDKLKEHNETSQ---GDSYHMGXXXXXXXXXXXEGIARNRXXXXXXXXXXG 689
             +K+  +DL  K+++ ++  Q    DS   G            G  R             
Sbjct: 284  RRKVNDADLGGKMRKPDKLFQEDSSDSSDSGSKQVEDGRTECSG--RREDELKEKSQDRA 341

Query: 688  SDRAGEGLCSVLRKLEAGRSKNVGELELSHSSRKRKIHSDEFHESNNGDSLPVSKHSYKT 509
             +R  E     LR       +N G +              EF  S NG      K +++ 
Sbjct: 342  RERPAEESNCSLRTFTTEALENHGRV--------------EFSSSQNG----CLKGTFEH 383

Query: 508  LQSSPGVSAKEAVSVAEKVQMGCSAREN-SLKVSTGSTSEGRSISGDQCLEKGYTVSPFK 332
             + +P   AK     AE+++   S  E   +     STS  RS+ G      G  ++P K
Sbjct: 384  EERNPVEEAKGTTDNAERIETHSSPAEKLQMPELIDSTSNRRSLDGGD----GLKLTPVK 439

Query: 331  RKRKSEELDSDASVTAANEEIYSS-AYPVTSAPSESKMGSFLERCDVCSKRKRLEVDSMK 155
            RKR + +LDSDAS    +++I +  A  V+++P+       +E C VCSKR+R   +  K
Sbjct: 440  RKRNTLDLDSDASERVPSKDICTPIADAVSTSPTGCTTNKVVETCGVCSKRQREFYEHSK 499

Query: 154  Y 152
            +
Sbjct: 500  F 500


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score =  105 bits (263), Expect = 2e-20
 Identities = 112/399 (28%), Positives = 160/399 (40%), Gaps = 1/399 (0%)
 Frame = -2

Query: 1369 MANVTRSGRKLKDDENIXXXXXXXXXXXXXXXXXXXGLRRSARETPSKKQRASSPLSIRK 1190
            M N T++ RK K +E+                    GLRRS RE  SKK    SP S RK
Sbjct: 1    MGNDTKASRKAKAEES-KNNDVKGRNIASRSSTDKSGLRRSVREASSKKNVTPSPSSTRK 59

Query: 1189 SERIEKRTPPTPPIKKSSER-VEKEITPSLLRRSERGENHRSSDSRXXXXXXXXXXXXXX 1013
            SER+EK+TP  PP  + SER VEK+   S LRRSERG+N  SS S               
Sbjct: 60   SERLEKQTPTAPPATRKSERLVEKQSLSSPLRRSERGKNQSSSSSSGSKKSGKKSSSSVM 119

Query: 1012 XXXXXXXXKYITVNARDRNKDGEKERRPVRIVLGKKRLDARTYRESLLKPQAKKIQKSDL 833
                        +  +D   D  K+     +++  KR+DAR Y+ +L K Q KK      
Sbjct: 120  KKKQKKEKSVKQLETKDVGND--KKHVIKAVLVETKRMDARAYK-ALFKRQQKKANLEGR 176

Query: 832  SDKLKEHNETSQGDSYHMGXXXXXXXXXXXEGIARNRXXXXXXXXXXGSDRAGEGLCSVL 653
             +++K  N+ + G+    G               R             S++  EG     
Sbjct: 177  CEEMK--NKNADGNDCRDGASENVNGGSECS--QRKVEELIDRCVLRDSEKNLEGNSIAS 232

Query: 652  RKLEAGRSKNVGELELSHSSRKRKIHSDEFHESNNGDSLPVSKHSYKTLQSSPGVSAKEA 473
              ++     N G      S +   +  D  H+   GDS          L S+    ++  
Sbjct: 233  EPVKEVLENNGGPKPPLKSQKLTFLEKD--HQFKEGDSREDLNSDDSVLLSAQRTLSEPE 290

Query: 472  VSVAEKVQMGCSARENSLKVSTGSTSEGRSISGDQCLEKGYTVSPFKRKRKSEELDSDAS 293
              VA+  Q    A    L V+       R+   D  +E GY   PFKRKR  E+L+SDA+
Sbjct: 291  NDVAQMEQEQLPAELVDLTVN-------RTPRVDTEVESGYKEMPFKRKRSIEDLNSDAT 343

Query: 292  VTAANEEIYSSAYPVTSAPSESKMGSFLERCDVCSKRKR 176
               +N+          +AP E+     + +C   SKR+R
Sbjct: 344  TMVSNK-------VADAAPYENGRTDSVAKCATSSKRQR 375


>ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1|
            mom(plant), putative [Ricinus communis]
          Length = 1982

 Score = 88.2 bits (217), Expect = 5e-15
 Identities = 110/387 (28%), Positives = 166/387 (42%), Gaps = 5/387 (1%)
 Frame = -2

Query: 1249 SARETPSKKQRASSPLSIRKSERIEKRTPPTPPIKKSSERVEKEITPSLLRRSERGENHR 1070
            SARETP+ +  +S+P   RKSER+EKRT PTP +K      +K+ T S LRRSERG+   
Sbjct: 14   SARETPTNRSMSSNPSGTRKSERLEKRT-PTPLVKGKD---KKQSTQSPLRRSERGKKQF 69

Query: 1069 SSDSRXXXXXXXXXXXXXXXXXXXXXXKYITVNARDRNKDGEKERRPVRIVLGKKRLDAR 890
            SS S                            + +    + E+  R  +  + KKRL+AR
Sbjct: 70   SSSSSGSKKSNKNIGISVMKKKVKKEK-----SVKQLTFETEEVSRS-KTQVEKKRLNAR 123

Query: 889  TYRESLLKPQAKKIQKSDLSDKLKEHNETSQG-DSYHMGXXXXXXXXXXXEGIARNRXXX 713
             YR +L   Q KK+  +    +L   N+ SQ   S   G            G  +     
Sbjct: 124  DYR-ALFNLQRKKVSVAGCGKELNLENKLSQECSSSDEGGASKNVGRGNECGRGKVEELR 182

Query: 712  XXXXXXXGSDRAGEGLCSVLRKLEAGRSKNVGELELSHSSRKRKIHSDEFHESNNGDSLP 533
                         E  CS+ +  +     N+G L+ S SS+  K   +  H S +G SL 
Sbjct: 183  KIHTGRGSERTKEESNCSLSKPADEIVENNIG-LDSSLSSQNHKF-VEGAHLSEDGTSLE 240

Query: 532  VSKHSYKTLQSS-PGVSAK--EAVSVAEKVQMGCSARENSLKVSTGSTSEGRSISGDQCL 362
             SK     L SS   VS K  +   +A+K+           ++ T ++S G   SG   L
Sbjct: 241  NSKGGDCVLLSSHKTVSGKQDDCDEMAKKIVQS--------ELVTPASSGGLPDSGGG-L 291

Query: 361  EKGYTVSPFKRKRKSEELDSDASVTAANEEIYSSAYPVTSAPSESKMGS-FLERCDVCSK 185
            + G    P KRKR ++ +DSD++  A+++++     P+ +A   S  GS F E C    K
Sbjct: 292  DIGSKDIPPKRKRNTDNIDSDSTALASSKDV---CPPLANAIISSPHGSNFAESCATSFK 348

Query: 184  RKRLEVDSMKYNICSCNYGTNRDSCNN 104
            ++       K +IC C     +   N+
Sbjct: 349  KQSQNWPKPK-SICKCKVNKLKSKLND 374


>gb|AFK41110.1| unknown [Lotus japonicus]
          Length = 256

 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 68/176 (38%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
 Frame = -2

Query: 1369 MANVTRSGRKLKDDEN----IXXXXXXXXXXXXXXXXXXXGLRRSARETPSKKQRASSPL 1202
            M N TRS ++ KD EN    +                   G+RRSARETPSKK   SS  
Sbjct: 1    MGNGTRSSQRAKDGENYNERMKQDSEKGKISPSPTESDTTGVRRSARETPSKKIIPSSS- 59

Query: 1201 SIRKSERIEKRTPPTPPIKKSSERVEKEITPSLLRRS--ERGENHRSSDSRXXXXXXXXX 1028
            S RKSER+EK TPP+P + K SERVEK+  PS LRRS   RG++   SDS+         
Sbjct: 60   SARKSERLEKGTPPSPAVSKKSERVEKKNMPSPLRRSGRARGQSSTPSDSK--------S 111

Query: 1027 XXXXXXXXXXXXXKYITVNARDRNKDGEKERRPVRIVLGKKRLDARTYRESLLKPQ 860
                         K +T+ A++ N+   +E  P  + +  KR+DAR YR    KP+
Sbjct: 112  SGSLNSKQKQKSVKQVTLEAKEVNQ--SEEHDPETLQVKVKRMDARMYRSLFKKPK 165