BLASTX nr result

ID: Cimicifuga21_contig00021888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021888
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527556.1| kinase, putative [Ricinus communis] gi|22353...   174   7e-42
ref|XP_002312867.1| predicted protein [Populus trichocarpa] gi|2...   162   4e-38
ref|XP_002527558.1| serine-threonine protein kinase, plant-type,...   156   2e-36
ref|XP_002312868.1| predicted protein [Populus trichocarpa] gi|2...   154   6e-36
ref|XP_002312869.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35

>ref|XP_002527556.1| kinase, putative [Ricinus communis] gi|223533048|gb|EEF34808.1|
           kinase, putative [Ricinus communis]
          Length = 739

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/176 (47%), Positives = 105/176 (59%), Gaps = 10/176 (5%)
 Frame = -2

Query: 516 SCSGIGCCQTPIPNNLNTLYVSVQPVSANSSQLNSSYCFFGFLADSTWFEKSSSFNLADT 337
           SCSG GCCQTPIP ++ TL + +Q  + +S  LN + C F FLAD   F  S    L+D 
Sbjct: 176 SCSGFGCCQTPIPKSIKTLSIDLQSPNNHSKVLNFNPCEFAFLADERTFNVSD-LQLSDI 234

Query: 336 PETLG-----KPHVLLDWAIREKSC-----GGDRNEYICGENTNCTNSTNGPGYRCLCNE 187
           P +       K  V+++W +RE++C       + N Y CG NTNC  S NG GYRC C +
Sbjct: 235 PFSAAINESVKSDVVIEWVVREETCETAQSSSNPNGYACGSNTNCLYSDNGNGYRCSCKD 294

Query: 186 GYQGNPYTSKGCEDIDECLPDYRNKYPCKGTCKNTAGGYNCHCSFGYEGDAIIGCR 19
           G++GNPY  +GC+DIDEC      KY C GTCKNT GGY C C  G  GD  +GCR
Sbjct: 295 GFKGNPYLPQGCQDIDEC--QEPEKYKCDGTCKNTIGGYTCQCPLGMRGDGKVGCR 348


>ref|XP_002312867.1| predicted protein [Populus trichocarpa] gi|222849275|gb|EEE86822.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  162 bits (409), Expect = 4e-38
 Identities = 75/169 (44%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
 Frame = -2

Query: 516 SCSGIGCCQTPIPNNLNTLYVSVQPVSANSSQLNSSYCFFGFLADSTWFEKSSSFNLADT 337
           SCSG GCCQT IP  L +L ++VQ +  +++    + C F FL +   F  S  + L+ T
Sbjct: 167 SCSGSGCCQTSIPKGLKSLNITVQSLRNHTTVSEFNPCGFAFLQEKVSFNLSD-WPLSRT 225

Query: 336 PETLGKPHVLLDWAIREKSCG---GDRNEYICGENTNCTNSTNGPGYRCLCNEGYQGNPY 166
           P    + +V+++W  + ++C     +++ Y CG NTNC  S NG GYRC CNEG++GNPY
Sbjct: 226 PTDFDRSNVVIEWVAQTETCEEARANKSSYACGINTNCYYSDNGQGYRCACNEGFEGNPY 285

Query: 165 TSKGCEDIDECLPDYRNKYPCKGTCKNTAGGYNCHCSFGYEGDAIIGCR 19
             KGC+DIDEC  D   +YPC+G C NT G Y C C  G  GD   GCR
Sbjct: 286 LEKGCQDIDEC-KDAGKRYPCQGKCHNTIGDYECKCPLGMRGDGKRGCR 333


>ref|XP_002527558.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223533050|gb|EEF34810.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 771

 Score =  156 bits (394), Expect = 2e-36
 Identities = 78/170 (45%), Positives = 101/170 (59%), Gaps = 3/170 (1%)
 Frame = -2

Query: 519 TSCSGIGCCQTPIPNNLNTLYVSVQPVSANSSQLNSSYCFFGFLADSTWFEKSSSFNLAD 340
           +SC G GCCQT IP +L TL +S+   ++  +  + + C F FLAD   F  S+  NL  
Sbjct: 214 SSCGGYGCCQTSIPQSLKTLNISLTSPNSRMNVWDFNPCGFAFLADQRNFNVSN-LNLTY 272

Query: 339 TPETLGKPHVLLDWAIREKSCGGDRNE---YICGENTNCTNSTNGPGYRCLCNEGYQGNP 169
           + +       +++W + EK+CG D N+   Y C  NT+C  S NG GYRC C EG+ GNP
Sbjct: 273 SEDEFISSTSVIEWVVEEKTCG-DANKSDSYACRRNTDCIYSENGQGYRCSCKEGFAGNP 331

Query: 168 YTSKGCEDIDECLPDYRNKYPCKGTCKNTAGGYNCHCSFGYEGDAIIGCR 19
           Y  +GCEDIDEC      KYPC+GTCKNT G Y C C  G  GD  +GCR
Sbjct: 332 YI-EGCEDIDECNDPL--KYPCQGTCKNTFGNYTCSCPLGMRGDGKVGCR 378


>ref|XP_002312868.1| predicted protein [Populus trichocarpa] gi|222849276|gb|EEE86823.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score =  154 bits (390), Expect = 6e-36
 Identities = 72/167 (43%), Positives = 98/167 (58%), Gaps = 3/167 (1%)
 Frame = -2

Query: 516 SCSGIGCCQTPIPNNLNTLYVSVQPVSANSSQLNSSYCFFGFLADSTWFEKSSSFNLADT 337
           SCSG GCCQT IP  L +L +++Q  + ++     + C F FL D    + S  + L+ T
Sbjct: 138 SCSGSGCCQTSIPKGLKSLDITIQSFNNHTDVFEFNPCGFAFLEDKDSLDLSD-WPLSRT 196

Query: 336 PETLGKPHVLLDWAIREKSCG---GDRNEYICGENTNCTNSTNGPGYRCLCNEGYQGNPY 166
           P+     +V+++W  + ++C     +++ Y CG NTNC  S NG GYRC CNEG++GNPY
Sbjct: 197 PKPNDTSNVVIEWVAQTETCEKAQANKSSYACGINTNCNYSDNGQGYRCACNEGFEGNPY 256

Query: 165 TSKGCEDIDECLPDYRNKYPCKGTCKNTAGGYNCHCSFGYEGDAIIG 25
             KGC+DIDEC   Y   Y C G C NT G Y C CS G  GD  +G
Sbjct: 257 LEKGCQDIDEC--KYPETYTCYGKCHNTIGDYECKCSLGMHGDGKVG 301


>ref|XP_002312869.1| predicted protein [Populus trichocarpa] gi|222849277|gb|EEE86824.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/174 (41%), Positives = 98/174 (56%), Gaps = 3/174 (1%)
 Frame = -2

Query: 516 SCSGIGCCQTPIPNNLNTLYVSVQPVSANSSQLNSSYCFFGFLADSTWFEKSSSFNLADT 337
           SCSG GCCQT IP  L +L +++Q    + +    + C F FL D    + S  + L+ T
Sbjct: 57  SCSGSGCCQTSIPKGLKSLNITIQSTDNHKNVSEFNPCGFAFLEDKDSLDLSD-WPLSRT 115

Query: 336 PETLGKPHVLLDWAIREKSCG---GDRNEYICGENTNCTNSTNGPGYRCLCNEGYQGNPY 166
           P      +V+++W  + + C     +++ Y CG NTNC  S NG GYRC CN G++GNPY
Sbjct: 116 PTDFETSNVVIEWVAQTEKCEKAQANKSSYACGINTNCYYSDNGQGYRCACNAGFEGNPY 175

Query: 165 TSKGCEDIDECLPDYRNKYPCKGTCKNTAGGYNCHCSFGYEGDAIIGCRLKTVT 4
             +GC+DIDEC      KY C G C NT G Y C CS G  GD  IGC+   +T
Sbjct: 176 LEQGCQDIDECKDP--KKYTCHGKCHNTIGDYECKCSLGMHGDGKIGCQGFAIT 227


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