BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021833
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   122   2e-26
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   122   2e-26
ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ric...   120   9e-26
ref|XP_004164103.1| PREDICTED: DNA topoisomerase 1-like, partial...   115   5e-24
ref|XP_004136443.1| PREDICTED: DNA topoisomerase 1-like, partial...   115   5e-24

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  122 bits (307), Expect = 2e-26
 Identities = 68/130 (52%), Positives = 76/130 (58%)
 Frame = -2

Query: 392  LTGVLDEDSLKLYSLIWSRTMACQMVPTVXXXXXXXXXGAGSFLRLRSTCSKVEFLGYQX 213
            L GVLDEDSLKLY+LIWSRTMACQM P            A   +  RSTCS VEF GYQ 
Sbjct: 751  LAGVLDEDSLKLYTLIWSRTMACQMEPATIDQIQVDIGNANESVVFRSTCSGVEFFGYQA 810

Query: 212  XXXXXXXXAIGYHEKEGDTREEAFEVXXXXXXXXXXXXXKVELKQHFTQPPARYSEGSLV 33
                    AI   E EG+ R E F+               +EL+QH T PP+RYSEG+LV
Sbjct: 811  VYKDVEAKAIRVDENEGNERGEVFKALSSLKAGDPLYLSLLELEQHHTLPPSRYSEGALV 870

Query: 32   KKLEELGIGR 3
            KKLEELGIGR
Sbjct: 871  KKLEELGIGR 880


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  122 bits (307), Expect = 2e-26
 Identities = 68/130 (52%), Positives = 76/130 (58%)
 Frame = -2

Query: 392  LTGVLDEDSLKLYSLIWSRTMACQMVPTVXXXXXXXXXGAGSFLRLRSTCSKVEFLGYQX 213
            L GVLDEDSLKLY+LIWSRTMACQM P            A   +  RSTCS VEF GYQ 
Sbjct: 764  LAGVLDEDSLKLYTLIWSRTMACQMEPATIDQIQVDIGNANESVVFRSTCSGVEFFGYQA 823

Query: 212  XXXXXXXXAIGYHEKEGDTREEAFEVXXXXXXXXXXXXXKVELKQHFTQPPARYSEGSLV 33
                    AI   E EG+ R E F+               +EL+QH T PP+RYSEG+LV
Sbjct: 824  VYKDVEAKAIRVDENEGNERGEVFKALSSLKAGDPLYLSLLELEQHHTLPPSRYSEGALV 883

Query: 32   KKLEELGIGR 3
            KKLEELGIGR
Sbjct: 884  KKLEELGIGR 893


>ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223532629|gb|EEF34415.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 1071

 Score =  120 bits (302), Expect = 9e-26
 Identities = 68/130 (52%), Positives = 76/130 (58%)
 Frame = -2

Query: 392  LTGVLDEDSLKLYSLIWSRTMACQMVPTVXXXXXXXXXGAGSFLRLRSTCSKVEFLGYQX 213
            L  VLDEDSLKLY+LIWSRT+ACQM P            A   + LRS CS V FLGYQ 
Sbjct: 656  LANVLDEDSLKLYTLIWSRTVACQMEPATIEQIQVDIGNANGSITLRSACSGVGFLGYQI 715

Query: 212  XXXXXXXXAIGYHEKEGDTREEAFEVXXXXXXXXXXXXXKVELKQHFTQPPARYSEGSLV 33
                    AI   E E +   EAF +             +V+LKQHFTQPP RYSEG+LV
Sbjct: 716  VYEDKEAGAIKNKESEVNDHNEAFGILKSLKPGDPFNLSEVKLKQHFTQPPPRYSEGTLV 775

Query: 32   KKLEELGIGR 3
            KKLEELGIGR
Sbjct: 776  KKLEELGIGR 785


>ref|XP_004164103.1| PREDICTED: DNA topoisomerase 1-like, partial [Cucumis sativus]
          Length = 1103

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/130 (46%), Positives = 77/130 (59%)
 Frame = -2

Query: 392  LTGVLDEDSLKLYSLIWSRTMACQMVPTVXXXXXXXXXGAGSFLRLRSTCSKVEFLGYQX 213
            L G LDEDS KLYSLIW RT+ACQM  ++          +   +  RSTCS+V+F G+Q 
Sbjct: 668  LVGTLDEDSHKLYSLIWLRTVACQMESSITEQIQIECGPSDESIISRSTCSRVQFRGFQE 727

Query: 212  XXXXXXXXAIGYHEKEGDTREEAFEVXXXXXXXXXXXXXKVELKQHFTQPPARYSEGSLV 33
                    A+ + + E + R+E F +              VELKQHFTQPP RYSEG+LV
Sbjct: 728  VFEDPEADAVKHKDHEDNGRDELFRILNALKPGDQLSLAAVELKQHFTQPPPRYSEGALV 787

Query: 32   KKLEELGIGR 3
            KK+EELGIGR
Sbjct: 788  KKMEELGIGR 797


>ref|XP_004136443.1| PREDICTED: DNA topoisomerase 1-like, partial [Cucumis sativus]
          Length = 1126

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/130 (46%), Positives = 77/130 (59%)
 Frame = -2

Query: 392  LTGVLDEDSLKLYSLIWSRTMACQMVPTVXXXXXXXXXGAGSFLRLRSTCSKVEFLGYQX 213
            L G LDEDS KLYSLIW RT+ACQM  ++          +   +  RSTCS+V+F G+Q 
Sbjct: 691  LVGTLDEDSHKLYSLIWLRTVACQMESSITEQIQIECGPSDESIISRSTCSRVQFRGFQE 750

Query: 212  XXXXXXXXAIGYHEKEGDTREEAFEVXXXXXXXXXXXXXKVELKQHFTQPPARYSEGSLV 33
                    A+ + + E + R+E F +              VELKQHFTQPP RYSEG+LV
Sbjct: 751  VFEDPEADAVKHKDHEDNGRDELFRILNALKPGDQLSLAAVELKQHFTQPPPRYSEGALV 810

Query: 32   KKLEELGIGR 3
            KK+EELGIGR
Sbjct: 811  KKMEELGIGR 820