BLASTX nr result

ID: Cimicifuga21_contig00021824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021824
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_973872.1| OPC-8:0 CoA ligase1 [Arabidopsis thaliana] gi|3...   273   4e-71
gb|AAP03021.1| 4-coumarate-CoA ligase-like protein [Arabidopsis ...   273   4e-71
ref|NP_564115.1| OPC-8:0 CoA ligase1 [Arabidopsis thaliana] gi|1...   273   4e-71
ref|XP_002893114.1| opc-8:0 CoA ligase1 [Arabidopsis lyrata subs...   272   1e-70
gb|ABR17473.1| unknown [Picea sitchensis]                             265   1e-68

>ref|NP_973872.1| OPC-8:0 CoA ligase1 [Arabidopsis thaliana]
            gi|332191860|gb|AEE29981.1| OPC-8:0 CoA ligase1
            [Arabidopsis thaliana]
          Length = 473

 Score =  273 bits (699), Expect = 4e-71
 Identities = 154/364 (42%), Positives = 221/364 (60%), Gaps = 15/364 (4%)
 Frame = -1

Query: 1052 LGVMSLGAIISTANTLNTRLELQSQIQDTNPKLIFTTEALKSKLDDGITARPLLILVEEF 873
            L VMSLGAII+T N LNT  E+  QI+D+NP L FTT  L  K+       P++++ EE 
Sbjct: 100  LSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEER 159

Query: 872  ADTLLHYPR---------HHDTLDVAISQDDIAALMYSSGTTGKSKLVACLHRNFIAMSC 720
             D++    R           + +   + QDD A L+YSSGTTG SK V   HRN IAM  
Sbjct: 160  VDSVGDVRRLVEMMKKEPSGNRVKERVDQDDTATLLYSSGTTGMSKGVISSHRNLIAMVQ 219

Query: 719  SLRHVWEAEDGAFDDIYLCVLPLFHMFGLSMFVCGTLATQSTTVVLNKYSLEDMLLSVEK 540
            ++ + + ++DG  +  ++C +P+FH++GL+ F  G LA  ST +VL+K+ + +M+ ++ K
Sbjct: 220  TIVNRFGSDDG--EQRFICTVPMFHIYGLAAFATGLLAYGSTIIVLSKFEMHEMMSAIGK 277

Query: 539  YKVTXXXXXXXXXXXXXXXQDGVQG-YDLASVKEVICSGAPLSRVHMDKFSKCYPQMRLS 363
            Y+ T                D ++  YDL+S+  V+C GAPLS+   + F++ YP +++ 
Sbjct: 278  YQATSLPLVPPILVAMVNGADQIKAKYDLSSMHTVLCGGAPLSKEVTEGFAEKYPTVKIL 337

Query: 362  QCYGLTETCGPITLCNGFSGMVHDS-----IGGLIPNMEAKIVDVRTGNPLPPLESGELC 198
            Q YGLTE+ G        +  V +S      G L  +ME +IVD  TG  L P ++GEL 
Sbjct: 338  QGYGLTESTG----IGASTDTVEESRRYGTAGKLSASMEGRIVDPVTGQILGPKQTGELW 393

Query: 197  LRGPSVMQGYFKNPNATSLAINKEGWLHTGDLCFIDMLGLVYIVDRMKELIKYKAYQVAP 18
            L+GPS+M+GYF N  ATS  ++ EGWL TGDLC+ID  G +++VDR+KELIKYK YQVAP
Sbjct: 394  LKGPSIMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAP 453

Query: 17   AELE 6
            AELE
Sbjct: 454  AELE 457


>gb|AAP03021.1| 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana]
          Length = 546

 Score =  273 bits (699), Expect = 4e-71
 Identities = 154/364 (42%), Positives = 221/364 (60%), Gaps = 15/364 (4%)
 Frame = -1

Query: 1052 LGVMSLGAIISTANTLNTRLELQSQIQDTNPKLIFTTEALKSKLDDGITARPLLILVEEF 873
            L VMSLGAII+T N LNT  E+  QI+D+NP L FTT  L  K+       P++++ EE 
Sbjct: 100  LSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEER 159

Query: 872  ADTLLHYPR---------HHDTLDVAISQDDIAALMYSSGTTGKSKLVACLHRNFIAMSC 720
             D++    R           + +   + QDD A L+YSSGTTG SK V   HRN IAM  
Sbjct: 160  VDSVGDVRRLVEMMKKEPSGNRVKERVDQDDTATLLYSSGTTGMSKGVISSHRNLIAMVQ 219

Query: 719  SLRHVWEAEDGAFDDIYLCVLPLFHMFGLSMFVCGTLATQSTTVVLNKYSLEDMLLSVEK 540
            ++ + + ++DG  +  ++C +P+FH++GL+ F  G LA  ST +VL+K+ + +M+ ++ K
Sbjct: 220  TIVNRFGSDDG--EQRFICTVPMFHIYGLTAFATGLLAYGSTIIVLSKFEMHEMMSAIGK 277

Query: 539  YKVTXXXXXXXXXXXXXXXQDGVQG-YDLASVKEVICSGAPLSRVHMDKFSKCYPQMRLS 363
            Y+ T                D ++  YDL+S+  V+C GAPLS+   + F++ YP +++ 
Sbjct: 278  YQATSLPLVPPILVAMVNGADQIKAKYDLSSMHTVLCGGAPLSKEVTEGFAEKYPTVKIL 337

Query: 362  QCYGLTETCGPITLCNGFSGMVHDS-----IGGLIPNMEAKIVDVRTGNPLPPLESGELC 198
            Q YGLTE+ G        +  V +S      G L  +ME +IVD  TG  L P ++GEL 
Sbjct: 338  QGYGLTESTG----IGASTDTVEESRRYGTAGKLSASMEGRIVDPVTGQILGPKQTGELW 393

Query: 197  LRGPSVMQGYFKNPNATSLAINKEGWLHTGDLCFIDMLGLVYIVDRMKELIKYKAYQVAP 18
            L+GPS+M+GYF N  ATS  ++ EGWL TGDLC+ID  G +++VDR+KELIKYK YQVAP
Sbjct: 394  LKGPSIMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAP 453

Query: 17   AELE 6
            AELE
Sbjct: 454  AELE 457


>ref|NP_564115.1| OPC-8:0 CoA ligase1 [Arabidopsis thaliana]
            gi|158564046|sp|Q84P21.2|4CLL5_ARATH RecName:
            Full=4-coumarate--CoA ligase-like 5; AltName:
            Full=4-coumarate--CoA ligase isoform 9; Short=At4CL9;
            AltName: Full=Peroxisomal OPC-8:0-CoA ligase 1
            gi|13430676|gb|AAK25960.1|AF360250_1 unknown protein
            [Arabidopsis thaliana] gi|14532846|gb|AAK64105.1| unknown
            protein [Arabidopsis thaliana]
            gi|116490123|gb|ABJ98946.1| peroxisomal OPC-8:0 CoA
            ligase [Arabidopsis thaliana] gi|332191859|gb|AEE29980.1|
            OPC-8:0 CoA ligase1 [Arabidopsis thaliana]
          Length = 546

 Score =  273 bits (699), Expect = 4e-71
 Identities = 154/364 (42%), Positives = 221/364 (60%), Gaps = 15/364 (4%)
 Frame = -1

Query: 1052 LGVMSLGAIISTANTLNTRLELQSQIQDTNPKLIFTTEALKSKLDDGITARPLLILVEEF 873
            L VMSLGAII+T N LNT  E+  QI+D+NP L FTT  L  K+       P++++ EE 
Sbjct: 100  LSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEER 159

Query: 872  ADTLLHYPR---------HHDTLDVAISQDDIAALMYSSGTTGKSKLVACLHRNFIAMSC 720
             D++    R           + +   + QDD A L+YSSGTTG SK V   HRN IAM  
Sbjct: 160  VDSVGDVRRLVEMMKKEPSGNRVKERVDQDDTATLLYSSGTTGMSKGVISSHRNLIAMVQ 219

Query: 719  SLRHVWEAEDGAFDDIYLCVLPLFHMFGLSMFVCGTLATQSTTVVLNKYSLEDMLLSVEK 540
            ++ + + ++DG  +  ++C +P+FH++GL+ F  G LA  ST +VL+K+ + +M+ ++ K
Sbjct: 220  TIVNRFGSDDG--EQRFICTVPMFHIYGLAAFATGLLAYGSTIIVLSKFEMHEMMSAIGK 277

Query: 539  YKVTXXXXXXXXXXXXXXXQDGVQG-YDLASVKEVICSGAPLSRVHMDKFSKCYPQMRLS 363
            Y+ T                D ++  YDL+S+  V+C GAPLS+   + F++ YP +++ 
Sbjct: 278  YQATSLPLVPPILVAMVNGADQIKAKYDLSSMHTVLCGGAPLSKEVTEGFAEKYPTVKIL 337

Query: 362  QCYGLTETCGPITLCNGFSGMVHDS-----IGGLIPNMEAKIVDVRTGNPLPPLESGELC 198
            Q YGLTE+ G        +  V +S      G L  +ME +IVD  TG  L P ++GEL 
Sbjct: 338  QGYGLTESTG----IGASTDTVEESRRYGTAGKLSASMEGRIVDPVTGQILGPKQTGELW 393

Query: 197  LRGPSVMQGYFKNPNATSLAINKEGWLHTGDLCFIDMLGLVYIVDRMKELIKYKAYQVAP 18
            L+GPS+M+GYF N  ATS  ++ EGWL TGDLC+ID  G +++VDR+KELIKYK YQVAP
Sbjct: 394  LKGPSIMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAP 453

Query: 17   AELE 6
            AELE
Sbjct: 454  AELE 457


>ref|XP_002893114.1| opc-8:0 CoA ligase1 [Arabidopsis lyrata subsp. lyrata]
            gi|297338956|gb|EFH69373.1| opc-8:0 CoA ligase1
            [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score =  272 bits (695), Expect = 1e-70
 Identities = 154/364 (42%), Positives = 221/364 (60%), Gaps = 15/364 (4%)
 Frame = -1

Query: 1052 LGVMSLGAIISTANTLNTRLELQSQIQDTNPKLIFTTEALKSKLDDGITARPLLILVEEF 873
            L VMSLGAII+T N LNT  E+  QI+D+NP L FTT  L  K+       P++++ EE 
Sbjct: 100  LSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKIAAAAKKLPIVLMDEER 159

Query: 872  ADTLLHYPRHHDTLDVA---------ISQDDIAALMYSSGTTGKSKLVACLHRNFIAMSC 720
             D++    R  + +            + QDD A L+YSSGTTG SK V   HRN IAM  
Sbjct: 160  VDSVGKVRRLVEMMKKEPSGNRVMERVDQDDTATLLYSSGTTGMSKGVISSHRNLIAMVQ 219

Query: 719  SLRHVWEAEDGAFDDIYLCVLPLFHMFGLSMFVCGTLATQSTTVVLNKYSLEDMLLSVEK 540
            ++ + + ++DG  +  ++C +P+FH++GL+ F  G LA  ST +VL+K+ + +M+ ++ K
Sbjct: 220  TIVNRFGSDDG--EQRFICTVPMFHIYGLAAFATGLLAYGSTIIVLSKFEMHEMMSAIGK 277

Query: 539  YKVTXXXXXXXXXXXXXXXQDGVQG-YDLASVKEVICSGAPLSRVHMDKFSKCYPQMRLS 363
            Y+ T                D ++  YDL+S+  V+C GAPLS+   + F++ YP +++ 
Sbjct: 278  YQATSLPLVPPILVAMVNGADQIKAKYDLSSLHTVLCGGAPLSKEVTEGFAEKYPTVKIL 337

Query: 362  QCYGLTETCGPITLCNGFSGMVHDS-----IGGLIPNMEAKIVDVRTGNPLPPLESGELC 198
            Q YGLTE+ G        +  V +S      G L  +ME +IVD  TG  L P ++GEL 
Sbjct: 338  QGYGLTESTG----IGASTDTVEESRRYGTAGKLSASMEGRIVDPVTGQILGPNQTGELW 393

Query: 197  LRGPSVMQGYFKNPNATSLAINKEGWLHTGDLCFIDMLGLVYIVDRMKELIKYKAYQVAP 18
            L+GPS+M+GYF N  ATS  ++ EGWL TGDLC+ID  G +++VDR+KELIKYK YQVAP
Sbjct: 394  LKGPSIMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAP 453

Query: 17   AELE 6
            AELE
Sbjct: 454  AELE 457


>gb|ABR17473.1| unknown [Picea sitchensis]
          Length = 548

 Score =  265 bits (677), Expect = 1e-68
 Identities = 154/357 (43%), Positives = 218/357 (61%), Gaps = 7/357 (1%)
 Frame = -1

Query: 1052 LGVMSLGAIISTANTLNTRLELQSQIQDTNPKLIFTTEALKSKLDDGITARPLLIL---V 882
            L ++S+GAI++TAN L+T  E+ +Q++D+ P + FT   L  KL    T  P++++   +
Sbjct: 111  LAILSIGAILTTANPLSTEREIVTQVKDSKPVIAFTLSHLIHKLR--ATQIPIILIQGTL 168

Query: 881  EEFADTLLHYPRHHDTLD---VAISQDDIAALMYSSGTTGKSKLVACLHRNFIAMSCSLR 711
            E    T LH     D  D   + I QDD A L+YSSGTTGKSK V   H N+IA     R
Sbjct: 169  ESRCVTTLHDLLQSDLKDMPSIDIKQDDTATLLYSSGTTGKSKGVVSTHGNYIATIAGNR 228

Query: 710  HVWEAEDGAFDDIYLCVLPLFHMFGLSMFVCGTLATQSTTVVLNKYSLEDMLLSVEKYKV 531
              +E E      +Y+C +PLFH++GL   VC TLA  +T VV  K+ +E++L S+E+Y+V
Sbjct: 229  VRYETEGCK---MYICSMPLFHIYGLRFLVC-TLAAGATIVVPPKFDMEEILRSIERYRV 284

Query: 530  TXXXXXXXXXXXXXXXQDGVQGYDLASVKEVICSGAPLSRVHMDKFSKCYPQMRLSQCYG 351
            T                 G Q YDL S++++   GAPL +     F+  +P++++ Q YG
Sbjct: 285  TLLPTVPSVLAALAKST-GAQKYDLGSLQQISLGGAPLGKDVTLTFNAKFPRIQIRQGYG 343

Query: 350  LTETCGPITLCNGFSGMVHDSIGGLIPNM-EAKIVDVRTGNPLPPLESGELCLRGPSVMQ 174
            LTET G I   N       +   GL+ ++ EAK+VD  +  PLPP + GEL LRGP+VM+
Sbjct: 344  LTETTGAIAYTNSDEENRRNGTVGLLSDVVEAKVVDPDSAKPLPPNQRGELWLRGPTVMK 403

Query: 173  GYFKNPNATSLAINKEGWLHTGDLCFIDMLGLVYIVDRMKELIKYKAYQVAPAELEE 3
            GYF N +AT+  ++ EGWL TGDLC+ D  G +++VDR+K+LIKYKAYQVAPAELEE
Sbjct: 404  GYFGNEHATATTLDSEGWLRTGDLCYFDEEGFLFVVDRLKDLIKYKAYQVAPAELEE 460


Top