BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021811
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...    80   2e-13
ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...    65   6e-09
ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat...    65   6e-09
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...    64   2e-08

>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
 Frame = +3

Query: 54  MFLKLHLLQSRSPPTRYVFQSFNLHLNSNSQNPNSSKT---FSQFLCSSAKDE-DVETIF 221
           M LK   LQS S   RY      + LNSN QNP+S  +   +S+ +  +  D  DVET+F
Sbjct: 8   MILKPLSLQSSS---RYAPSISTIGLNSNPQNPSSVFSRLYWSETIAETTVDNGDVETVF 64

Query: 222 HIVNSSESTQNLKHSLKSTQIYLSNDLIDGVLKRVRFS 335
            IV+S+ ST+NLK SLKS+ ++LSNDLID VLKRVRFS
Sbjct: 65  RIVSSASSTRNLKQSLKSSGVFLSNDLIDKVLKRVRFS 102


>ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|222852942|gb|EEE90489.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/71 (52%), Positives = 49/71 (69%)
 Frame = +3

Query: 123 LHLNSNSQNPNSSKTFSQFLCSSAKDEDVETIFHIVNSSESTQNLKHSLKSTQIYLSNDL 302
           L L++N QN N+            KD  V+ I++I+++S S+QNLK SLKST ++LSNDL
Sbjct: 27  LSLHTNPQNHNN------------KDIQVDAIYNIISNSTSSQNLKQSLKSTGVFLSNDL 74

Query: 303 IDGVLKRVRFS 335
           ID VLKRVRFS
Sbjct: 75  IDKVLKRVRFS 85


>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/63 (50%), Positives = 49/63 (77%)
 Frame = +3

Query: 147 NPNSSKTFSQFLCSSAKDEDVETIFHIVNSSESTQNLKHSLKSTQIYLSNDLIDGVLKRV 326
           +P SS T +Q L      +++ET+F I+ +S S+ ++KHSL+S++++LSN+LIDGVLKRV
Sbjct: 27  HPFSSSTDNQSL-----HQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRV 81

Query: 327 RFS 335
           RFS
Sbjct: 82  RFS 84


>ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/63 (50%), Positives = 49/63 (77%)
 Frame = +3

Query: 147 NPNSSKTFSQFLCSSAKDEDVETIFHIVNSSESTQNLKHSLKSTQIYLSNDLIDGVLKRV 326
           +P SS T +Q L      +++ET+F I+ +S S+ ++KHSL+S++++LSN+LIDGVLKRV
Sbjct: 27  HPFSSSTDNQSL-----HQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRV 81

Query: 327 RFS 335
           RFS
Sbjct: 82  RFS 84


>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/46 (67%), Positives = 37/46 (80%)
 Frame = +3

Query: 198 DEDVETIFHIVNSSESTQNLKHSLKSTQIYLSNDLIDGVLKRVRFS 335
           ++DVE ++ I+ SS S QNLK SL ST I+LSNDLID VLKRVRFS
Sbjct: 36  NDDVEVVYRIITSSSSVQNLKQSLTSTGIFLSNDLIDKVLKRVRFS 81