BLASTX nr result

ID: Cimicifuga21_contig00021778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021778
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635437.1| PREDICTED: putative glycerol-3-phosphate tra...   109   3e-22
emb|CBI38455.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002868054.1| predicted protein [Arabidopsis lyrata subsp....    97   1e-18
gb|ABD65148.1| transporter, putative [Brassica oleracea]               95   7e-18
gb|ABD65069.1| transporter, putative [Brassica oleracea]               93   2e-17

>ref|XP_003635437.1| PREDICTED: putative glycerol-3-phosphate transporter 4-like,
           partial [Vitis vinifera]
          Length = 525

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = -2

Query: 233 EAMLGTPPGIKLIGSLRCKEWSLKTYRYVVLLLTFIAYVCYHASRKPSSIVKSVLDPEPV 54
           E + GTPPGI LI S+R KEW   TYRYVVLL+TFIAY CYHASRKPSSIVKSV+DP+P 
Sbjct: 6   ETVRGTPPGILLIKSIRGKEWRQGTYRYVVLLITFIAYACYHASRKPSSIVKSVMDPDPK 65

Query: 53  KVVSNHPYPWPISEVFV 3
            ++     PWP+ E+FV
Sbjct: 66  MIIGKD--PWPVGEIFV 80


>emb|CBI38455.3| unnamed protein product [Vitis vinifera]
          Length = 507

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/69 (68%), Positives = 55/69 (79%)
 Frame = -2

Query: 233 EAMLGTPPGIKLIGSLRCKEWSLKTYRYVVLLLTFIAYVCYHASRKPSSIVKSVLDPEPV 54
           E + GTPPGI LI S+R KEW   TYRYVVLL+TFIAY CYHASRKPSSIVKSV+DP+P 
Sbjct: 6   ETVRGTPPGILLIKSIRGKEWRQGTYRYVVLLITFIAYACYHASRKPSSIVKSVMDPDPK 65

Query: 53  KVVSNHPYP 27
            ++   P+P
Sbjct: 66  MIIGKDPWP 74


>ref|XP_002868054.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313890|gb|EFH44313.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 335

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 5/77 (6%)
 Frame = -2

Query: 218 TPPGIKLIGSLRCKEWSLKTYRYVVLLLTFIAYVCYHASRKPSSIVKSVLDPE-----PV 54
           TPPGI L+  +R + WS KT+RY +LL+TFIAY CYHASRKPSSIVKSVL P+     P 
Sbjct: 9   TPPGIALLRRVRGRNWSPKTFRYAILLITFIAYACYHASRKPSSIVKSVLHPDSSTKPPQ 68

Query: 53  KVVSNHPYPWPISEVFV 3
           +  SN  YPWP+  VFV
Sbjct: 69  EHNSNKVYPWPMGNVFV 85


>gb|ABD65148.1| transporter, putative [Brassica oleracea]
          Length = 527

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
 Frame = -2

Query: 218 TPPGIKLIGSLRCKEWSLKTYRYVVLLLTFIAYVCYHASRKPSSIVKSVLDPEP-VKVVS 42
           TPPG+ L+  +R + WS KT+RYV+LL+TFIAY CYHASRKPSSIVKSVL PEP  K   
Sbjct: 9   TPPGVLLLRRIRGRNWSPKTFRYVILLITFIAYACYHASRKPSSIVKSVLHPEPSTKPPQ 68

Query: 41  NH---PYPWPISEVFV 3
            H     PWP+  VFV
Sbjct: 69  AHIINERPWPLGNVFV 84


>gb|ABD65069.1| transporter, putative [Brassica oleracea]
          Length = 539

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
 Frame = -2

Query: 218 TPPGIKLIGSLRCKEWSLKTYRYVVLLLTFIAYVCYHASRKPSSIVKSVLDPEPVKVVSN 39
           TPPGI L+  +R + WS KT+RY +LL+TFIAY CYHASRKPSSIVKSVL PEP      
Sbjct: 7   TPPGILLLRRVRGRNWSPKTFRYAILLITFIAYACYHASRKPSSIVKSVLHPEPSTKPPQ 66

Query: 38  HPY----PWPISEVFV 3
             +    PWP+  VFV
Sbjct: 67  QEHINMRPWPLGNVFV 82


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