BLASTX nr result

ID: Cimicifuga21_contig00021775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021775
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15
ref|NP_001059867.1| Os07g0535100 [Oryza sativa Japonica Group] g...    89   2e-15
gb|EEE67320.1| hypothetical protein OsJ_24566 [Oryza sativa Japo...    89   2e-15
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc...    87   5e-15
ref|NP_001059868.1| Os07g0535200 [Oryza sativa Japonica Group] g...    87   5e-15

>ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|222850806|gb|EEE88353.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 93/291 (31%), Positives = 134/291 (46%), Gaps = 18/291 (6%)
 Frame = -1

Query: 842 SLCDELVTDILVRVPS-KSLFRSKSVCKRWRCLI---SDQSFINSFIRRSTLPPLISGFF 675
           SL D+++ +IL RV   K L R KSVCK W  LI   SD S +  FI  +     +S   
Sbjct: 24  SLPDDVLVEILCRVTDRKHLIRLKSVCKCWNNLIPKISDSSPLRGFIYHALR---VSS-- 78

Query: 674 YREGYIYCSNGGCLNFIDTSNITNSNNCDLISTDKMMSFLKSIDGSMIVVDSCQGLLLYA 495
            RE YI       + +  T  +    +  + S   ++ F     G  +  D C GLLL+ 
Sbjct: 79  -RETYI-----DYIPYALTPTVAPEPHEFIKSYSSLLPF-DLARGDFL--DCCNGLLLFV 129

Query: 494 EKPSEGKEKSPHSIRYFVCNPVTKQWVALPEPQHCDFT-EGALLHCYNVDKFCLQKIEFR 318
           E P           RY+VCNPVTKQ VA+P     DFT E         D F  +   +R
Sbjct: 130 EGPIP---------RYYVCNPVTKQCVAIPR----DFTLENICTASLAFDPF--KSPHYR 174

Query: 317 VICL-IKKTPNLLEVEIYSSETGKWKEQKKCF-YRFTRGRGLGNITYFNGSAY------W 162
           V+C    K     ++ ++SSETG W  Q+  F Y   + R   +  Y +G  Y       
Sbjct: 175 VVCFDYSKLKPPQKLRVFSSETGSWTIQETAFGYGSKKSRLAKHCIYLDGVLYRQTASKQ 234

Query: 161 MDDDHDDSK-IVIYDLEKGSIRFIELPRSRRCAAH----LGVSDGSLYFAE 24
           +D    DSK ++ +DL +G+ R IELP   R A +    +G+S   L +++
Sbjct: 235 IDSKQIDSKRLLCFDLNRGNSRAIELPEKERLAPNDYGCIGLSRRHLCYSD 285


>ref|NP_001059867.1| Os07g0535100 [Oryza sativa Japonica Group]
           gi|22831058|dbj|BAC15921.1| unknown protein [Oryza
           sativa Japonica Group] gi|50508288|dbj|BAD32137.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113611403|dbj|BAF21781.1| Os07g0535100 [Oryza sativa
           Japonica Group] gi|215704833|dbj|BAG94861.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 377

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
 Frame = -1

Query: 842 SLCDELVTDILVRVPSKSLFRSKSVCKRWRCLISDQSFINSFIRRSTLPPLISGFFYREG 663
           SL D+LV +IL R+P +S+ R K VC+ WR LI+D+        R  LP  +SGFFY+  
Sbjct: 14  SLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADRE------HRKKLPQTLSGFFYK-- 65

Query: 662 YIYCSNGGCLNFIDTSNITNSNNCDLISTDKMMSFLKSIDGSMIVVDSCQGLLL---YAE 492
               S+ G        + TN +   +       SFL   D +++ +D C GLLL   +  
Sbjct: 66  ----SSSGERCPCSAHHFTNVSGKGVPLIYPSFSFLPQCD-TVVPLDCCNGLLLCRCFQP 120

Query: 491 KPSEGKEKSPHSIRYFVCNPVTKQWVALPEPQHCDFTEG-ALLHCYNVDKFCLQKIEFRV 315
            P+   ++      Y VCNP TK+WV LP+    D+  G   + C   D        F V
Sbjct: 121 GPNNSDDEI-EPFHYAVCNPATKEWVMLPD---ADWANGETRIACLCFDPAI--SSHFHV 174

Query: 314 ICLIK-KTPNLLEVEIYSSETGKW 246
           +  ++ +  ++  VEIYSSETG W
Sbjct: 175 LEYVEAEYEDVTGVEIYSSETGLW 198


>gb|EEE67320.1| hypothetical protein OsJ_24566 [Oryza sativa Japonica Group]
          Length = 377

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
 Frame = -1

Query: 842 SLCDELVTDILVRVPSKSLFRSKSVCKRWRCLISDQSFINSFIRRSTLPPLISGFFYREG 663
           SL D+LV +IL R+P +S+ R K VC+ WR LI+D+        R  LP  +SGFFY+  
Sbjct: 14  SLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADRE------HRKKLPQTLSGFFYK-- 65

Query: 662 YIYCSNGGCLNFIDTSNITNSNNCDLISTDKMMSFLKSIDGSMIVVDSCQGLLL---YAE 492
               S+ G        + TN +   +       SFL   D +++ +D C GLLL   +  
Sbjct: 66  ----SSSGERCPCSAHHFTNVSGKGVPLIYPSFSFLPQCD-TVVPLDCCNGLLLCRCFQP 120

Query: 491 KPSEGKEKSPHSIRYFVCNPVTKQWVALPEPQHCDFTEG-ALLHCYNVDKFCLQKIEFRV 315
            P+   ++      Y VCNP TK+WV LP+    D+  G   + C   D        F V
Sbjct: 121 GPNNSDDEI-EPFHYAVCNPATKEWVMLPD---ADWANGETRIACLCFDPAI--SSHFHV 174

Query: 314 ICLIK-KTPNLLEVEIYSSETGKW 246
           +  ++ +  ++  VEIYSSETG W
Sbjct: 175 LEYVEAEYEDVTGVEIYSSETGLW 198


>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 398

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 76/246 (30%), Positives = 118/246 (47%), Gaps = 6/246 (2%)
 Frame = -1

Query: 830 ELVTDILVRVPSKSLFRSKSVCKRWRCLISDQSFINSFIRRSTLPPLISGFFYREGYIYC 651
           +++ D+L R+P+K+L   + V K W  LI D+SF+ +  ++  L   +SGF ++E Y  C
Sbjct: 6   DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGL--ALSGFMFQEKYRKC 63

Query: 650 SNGGCLNFIDTSNITNSNNCDLISTDKMMSFLKSIDGSMIVVDSCQGLLLYAEKPSEGKE 471
                   ID S  T     D  S  + M F   +   ++++ SC GL+         + 
Sbjct: 64  P-------IDISTFTYM-PIDADSKVQKMVF-GFLPEDVVILQSCNGLVC-CRSCFRTQH 113

Query: 470 KSPHSIRYFVCNPVTKQWVALPEPQHCDFTEGALLHCYNVDKFCLQKIEFRVICLIKKTP 291
            + HS   +VCNP+ K+WV+    Q   F+  AL     +D        F+V+  I++  
Sbjct: 114 STTHSTTIYVCNPLFKKWVSFEVAQLDSFSSIALAFDPILDP-VNTATNFKVV-RIQQLE 171

Query: 290 NLLE-----VEIYSSETGKWKEQKKCFYRFTRGRGLGNI-TYFNGSAYWMDDDHDDSKIV 129
           N  E      EIYSSETG WKE  +  Y  + G  L N  TY  G  +W+    D  +I+
Sbjct: 172 NEQEEMYYTFEIYSSETGTWKESSEVCY--SDGNLLNNNGTYAKGVLHWLT---DTDQIL 226

Query: 128 IYDLEK 111
            +D EK
Sbjct: 227 AFDTEK 232


>ref|NP_001059868.1| Os07g0535200 [Oryza sativa Japonica Group]
           gi|22831059|dbj|BAC15922.1| unknown protein [Oryza
           sativa Japonica Group] gi|50508290|dbj|BAD32139.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113611404|dbj|BAF21782.1| Os07g0535200 [Oryza sativa
           Japonica Group] gi|215678802|dbj|BAG95239.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215686659|dbj|BAG88912.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 377

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 69/204 (33%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
 Frame = -1

Query: 842 SLCDELVTDILVRVPSKSLFRSKSVCKRWRCLISDQSFINSFIRRSTLPPLISGFFYREG 663
           SL D+LV +IL R+P +S+ R K VC+ WR LI+D+        R  LP  +SGFFY+  
Sbjct: 14  SLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADRE------HRKKLPQTLSGFFYK-- 65

Query: 662 YIYCSNGGCLNFIDTSNITNSNNCDLISTDKMMSFLKSIDGSMIVVDSCQGLLL---YAE 492
               S  G        + TN +   +       SFL   D +++ +D C GLLL   +  
Sbjct: 66  ----SISGERCPCSAHHFTNVSGKGVPLIYPSFSFLPQCD-TVVPLDCCNGLLLCRCFQP 120

Query: 491 KPSEGKEKSPHSIRYFVCNPVTKQWVALPEPQHCDFTEG-ALLHCYNVDKFCLQKIEFRV 315
            P+   ++      Y VCNP TK+WV LP+    D+  G   + C   D        F V
Sbjct: 121 GPNNSDDEI-EPFHYAVCNPATKEWVMLPD---ADWANGETRIACLCFDPAI--SSHFHV 174

Query: 314 ICLIK-KTPNLLEVEIYSSETGKW 246
           +  ++ +  ++  VEIYSSETG W
Sbjct: 175 LEYVEAEYEDVTGVEIYSSETGLW 198


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