BLASTX nr result

ID: Cimicifuga21_contig00021773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021773
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional...   140   3e-31
emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera]   140   3e-31
ref|NP_001238108.1| uncharacterized protein LOC100499671 [Glycin...   137   2e-30
emb|CBI34506.3| unnamed protein product [Vitis vinifera]              136   6e-30
dbj|BAB41214.1| putative transcriptional coactivator [Brassica r...   135   9e-30

>ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Vitis vinifera]
          Length = 187

 Score =  140 bits (354), Expect = 3e-31
 Identities = 67/88 (76%), Positives = 80/88 (90%)
 Frame = +2

Query: 380 EEDTKRNVAGKEYDDDGDLIICRLSNKRRVTIQDFKGKTLVSIREYYEKDGKQLPSNKGI 559
           EED  ++   KEYDDDGDLIICRLS++RRVTIQDF+GKTLVSIRE+Y KDGK+LPS+KGI
Sbjct: 99  EEDRGKSSGVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGI 158

Query: 560 SLTAEQWSAFSKAVPAIEDSIKKMETRM 643
           SLTAEQWSAF K VPAIE++I+KME+R+
Sbjct: 159 SLTAEQWSAFKKNVPAIEEAIQKMESRL 186



 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 42/63 (66%), Positives = 54/63 (85%)
 Frame = +3

Query: 36  MEPETQAKIEETVTSILKSSDMNEMTEFKVRNLAGEKLGLNLSGSEHKKFVRKVVESFLL 215
           MEPET+ +IE+TV  ILKS+DM+EMTEFKVR LA +KLG+NLS  ++K+FVR+VVE+FL 
Sbjct: 1   MEPETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLQ 60

Query: 216 SQE 224
           S E
Sbjct: 61  STE 63


>emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera]
          Length = 320

 Score =  140 bits (354), Expect = 3e-31
 Identities = 67/88 (76%), Positives = 80/88 (90%)
 Frame = +2

Query: 380 EEDTKRNVAGKEYDDDGDLIICRLSNKRRVTIQDFKGKTLVSIREYYEKDGKQLPSNKGI 559
           EED  ++   KEYDDDGDLIICRLS++RRVTIQDF+GKTLVSIRE+Y KDGK+LPS+KGI
Sbjct: 177 EEDRGKSSGVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGI 236

Query: 560 SLTAEQWSAFSKAVPAIEDSIKKMETRM 643
           SLTAEQWSAF K VPAIE++I+KME+R+
Sbjct: 237 SLTAEQWSAFKKNVPAIEEAIQKMESRL 264



 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 42/64 (65%), Positives = 55/64 (85%)
 Frame = +3

Query: 33  EMEPETQAKIEETVTSILKSSDMNEMTEFKVRNLAGEKLGLNLSGSEHKKFVRKVVESFL 212
           +MEPET+ +IE+TV  ILKS+DM+EMTEFKVR LA +KLG+NLS  ++K+FVR+VVE+FL
Sbjct: 78  KMEPETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFL 137

Query: 213 LSQE 224
            S E
Sbjct: 138 QSTE 141


>ref|NP_001238108.1| uncharacterized protein LOC100499671 [Glycine max]
           gi|255625681|gb|ACU13185.1| unknown [Glycine max]
          Length = 163

 Score =  137 bits (346), Expect = 2e-30
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = +2

Query: 377 EEEDTKRNVAGKEYDDDGDLIICRLSNKRRVTIQDFKGKTLVSIREYYEKDGKQLPSNKG 556
           EEE+      GKEYDD+GDLIICRLS+KRRVTIQDF+GKTLVSIREYY+KDGK+LP++KG
Sbjct: 76  EEEELGGASKGKEYDDEGDLIICRLSDKRRVTIQDFRGKTLVSIREYYKKDGKELPTSKG 135

Query: 557 ISLTAEQWSAFSKAVPAIEDSIKKMET 637
           ISLT EQWSAF K VPAIE +IKKME+
Sbjct: 136 ISLTEEQWSAFKKNVPAIEKAIKKMES 162



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 33/66 (50%), Positives = 47/66 (71%)
 Frame = +3

Query: 39  EPETQAKIEETVTSILKSSDMNEMTEFKVRNLAGEKLGLNLSGSEHKKFVRKVVESFLLS 218
           + ET+ +IEETV  IL+ SDM+E+TE K+R  A E LGL+LS    K FV++VV++FL  
Sbjct: 3   DTETKGRIEETVRRILQESDMDEVTESKIRKQASEHLGLDLSQPYFKAFVKQVVKAFLQE 62

Query: 219 QETEQQ 236
           +E  Q+
Sbjct: 63  EEQRQK 68


>emb|CBI34506.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score =  136 bits (343), Expect = 6e-30
 Identities = 64/78 (82%), Positives = 75/78 (96%)
 Frame = +2

Query: 410 KEYDDDGDLIICRLSNKRRVTIQDFKGKTLVSIREYYEKDGKQLPSNKGISLTAEQWSAF 589
           KEYDDDGDLIICRLS++RRVTIQDF+GKTLVSIRE+Y KDGK+LPS+KGISLTAEQWSAF
Sbjct: 64  KEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQWSAF 123

Query: 590 SKAVPAIEDSIKKMETRM 643
            K VPAIE++I+KME+R+
Sbjct: 124 KKNVPAIEEAIQKMESRL 141



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 41/61 (67%), Positives = 53/61 (86%)
 Frame = +3

Query: 36  MEPETQAKIEETVTSILKSSDMNEMTEFKVRNLAGEKLGLNLSGSEHKKFVRKVVESFLL 215
           MEPET+ +IE+TV  ILKS+DM+EMTEFKVR LA +KLG+NLS  ++K+FVR+VVE+FL 
Sbjct: 1   MEPETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLH 60

Query: 216 S 218
           S
Sbjct: 61  S 61


>dbj|BAB41214.1| putative transcriptional coactivator [Brassica rapa]
          Length = 165

 Score =  135 bits (341), Expect = 9e-30
 Identities = 63/89 (70%), Positives = 78/89 (87%)
 Frame = +2

Query: 377 EEEDTKRNVAGKEYDDDGDLIICRLSNKRRVTIQDFKGKTLVSIREYYEKDGKQLPSNKG 556
           EEE+ +     KE+DDDGDLIICRLS+KRRVTIQ+F+GK+LVSIREYY+KDGK+LPS+KG
Sbjct: 77  EEEEERAKEGNKEFDDDGDLIICRLSDKRRVTIQEFRGKSLVSIREYYKKDGKELPSSKG 136

Query: 557 ISLTAEQWSAFSKAVPAIEDSIKKMETRM 643
           ISLT EQWS F K +PAIE ++KKME+R+
Sbjct: 137 ISLTDEQWSTFKKNIPAIEAAVKKMESRV 165



 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 44/67 (65%), Positives = 53/67 (79%)
 Frame = +3

Query: 36  MEPETQAKIEETVTSILKSSDMNEMTEFKVRNLAGEKLGLNLSGSEHKKFVRKVVESFLL 215
           ME E++AKIEETV  ILK SDM EMTEFKVRNLA E+LG++LS   HK FVR +V+SFL 
Sbjct: 1   MEEESKAKIEETVREILKESDMTEMTEFKVRNLASERLGIDLSDKSHKAFVRGIVKSFLE 60

Query: 216 SQETEQQ 236
             E++QQ
Sbjct: 61  EVESKQQ 67


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