BLASTX nr result

ID: Cimicifuga21_contig00021759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021759
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280767.1| PREDICTED: uncharacterized protein LOC100252...   105   5e-21
emb|CBI27867.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002514090.1| Cell growth-regulating nucleolar protein, pu...    91   1e-16
gb|ACG34317.1| RNA-binding protein [Zea mays]                          90   2e-16
ref|XP_004141064.1| PREDICTED: uncharacterized protein LOC101207...    89   3e-16

>ref|XP_002280767.1| PREDICTED: uncharacterized protein LOC100252615 [Vitis vinifera]
          Length = 325

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = -2

Query: 299 KEANSKKIKWKRLITSVLKSNPNEAMKLRKLQKLVSKSLKESGQNEDEDQLKEKLAEKIN 120
           KE   KKIKWK+LITS LKSNP+  +K+RKL+KLV K+L+ESG  +DE QL EKL  KIN
Sbjct: 248 KEDTKKKIKWKKLITSALKSNPDGVLKMRKLRKLVIKALEESGITDDETQLSEKLEHKIN 307

Query: 119 SSSRFTLDNKLVRLVAK 69
           SSSRFT+DNK VRL AK
Sbjct: 308 SSSRFTVDNKYVRLAAK 324


>emb|CBI27867.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = -2

Query: 299 KEANSKKIKWKRLITSVLKSNPNEAMKLRKLQKLVSKSLKESGQNEDEDQLKEKLAEKIN 120
           KE   KKIKWK+LITS LKSNP+  +K+RKL+KLV K+L+ESG  +DE QL EKL  KIN
Sbjct: 203 KEDTKKKIKWKKLITSALKSNPDGVLKMRKLRKLVIKALEESGITDDETQLSEKLEHKIN 262

Query: 119 SSSRFTLDNKLVRLVAK 69
           SSSRFT+DNK VRL AK
Sbjct: 263 SSSRFTVDNKYVRLAAK 279


>ref|XP_002514090.1| Cell growth-regulating nucleolar protein, putative [Ricinus
           communis] gi|223546546|gb|EEF48044.1| Cell
           growth-regulating nucleolar protein, putative [Ricinus
           communis]
          Length = 312

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/83 (55%), Positives = 62/83 (74%)
 Frame = -2

Query: 317 NLTGDAKEANSKKIKWKRLITSVLKSNPNEAMKLRKLQKLVSKSLKESGQNEDEDQLKEK 138
           N TG  KE  +KKIK K+LI S L++NP+  +K++KL+KLV KSL+ESG  EDE ++ + 
Sbjct: 229 NATGFTKEDTNKKIKLKKLIKSALRTNPDGVLKMKKLKKLVFKSLRESGIIEDETRVNDM 288

Query: 137 LAEKINSSSRFTLDNKLVRLVAK 69
           L +KIN+SSRF  DNK VRL A+
Sbjct: 289 LEQKINTSSRFKADNKYVRLAAR 311


>gb|ACG34317.1| RNA-binding protein [Zea mays]
          Length = 323

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/80 (53%), Positives = 61/80 (76%)
 Frame = -2

Query: 305 DAKEANSKKIKWKRLITSVLKSNPNEAMKLRKLQKLVSKSLKESGQNEDEDQLKEKLAEK 126
           D K    +KIKWK++IT  LK+N +  MKL+KLQK+VSK L+E G ++D+++L+  L +K
Sbjct: 215 DCKSVQKQKIKWKKIITKTLKANADGVMKLKKLQKIVSKELQECGVSKDKEELRATLMDK 274

Query: 125 INSSSRFTLDNKLVRLVAKS 66
           I SSSRF++D K VRLVAK+
Sbjct: 275 IASSSRFSVDGKNVRLVAKN 294


>ref|XP_004141064.1| PREDICTED: uncharacterized protein LOC101207334 [Cucumis sativus]
           gi|449488063|ref|XP_004157930.1| PREDICTED:
           uncharacterized protein LOC101225976 [Cucumis sativus]
          Length = 316

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/88 (52%), Positives = 62/88 (70%)
 Frame = -2

Query: 329 EEEKNLTGDAKEANSKKIKWKRLITSVLKSNPNEAMKLRKLQKLVSKSLKESGQNEDEDQ 150
           ++E   +   KE    KIKWK+LITS+LKSNP+  +KL KL+KL  KS++ESG  EDE +
Sbjct: 229 KDEARASKPLKEDLKMKIKWKKLITSILKSNPDGVLKLSKLRKLTLKSIRESGVTEDETK 288

Query: 149 LKEKLAEKINSSSRFTLDNKLVRLVAKS 66
           L   L +KINSSS+F ++ K VRL AK+
Sbjct: 289 LIGMLDQKINSSSKFAVEKKYVRLTAKA 316


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