BLASTX nr result

ID: Cimicifuga21_contig00021729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021729
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22654.1| unknown [Picea sitchensis]                              56   3e-06
ref|XP_002519702.1| conserved hypothetical protein [Ricinus comm...    54   5e-06

>gb|ABK22654.1| unknown [Picea sitchensis]
          Length = 203

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = +1

Query: 34  IHANGEIPREALEEECYNIYAHGHMREKLVGGARVLLRDVLRGGNAVELLDNMIRCMMIR 213
           + A+ E+  + +     +IYA GHMR+KLVG +R+L+  VL+GG+A  L DN I CM + 
Sbjct: 71  LQADDELLSQNMAAVNVDIYARGHMRDKLVGTSRILISQVLKGGDAANLYDNPIGCMPVL 130

Query: 214 ER 219
            R
Sbjct: 131 VR 132


>ref|XP_002519702.1| conserved hypothetical protein [Ricinus communis]
           gi|223541119|gb|EEF42675.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score = 53.9 bits (128), Expect(2) = 5e-06
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +1

Query: 85  NIYAHGHMREKLVGGARVLLRDVLRGGNAVELLDNMIRCMMIR 213
           +IYAHGH+R+K VG ARVLL DVL+GG     +DN I+CM ++
Sbjct: 97  DIYAHGHVRDKPVGSARVLLCDVLKGGRPDVPVDNPIQCMTVQ 139



 Score = 21.2 bits (43), Expect(2) = 5e-06
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 47  VKFREKLLKRNVITSM 94
           V FRE LL+ N+I ++
Sbjct: 79  VMFRENLLETNIIAAL 94


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