BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021703
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...   150   2e-34
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...   148   9e-34
ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thali...   124   1e-26
ref|NP_176103.2| helicase associated domain-containing protein [...   124   1e-26

>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
           gi|297739540|emb|CBI29722.3| unnamed protein product
           [Vitis vinifera]
          Length = 1458

 Score =  150 bits (380), Expect = 2e-34
 Identities = 95/199 (47%), Positives = 114/199 (57%), Gaps = 2/199 (1%)
 Frame = -2

Query: 700 LCLNLPGNELPLKFXXXXXXXXXXXXXXXXS-TAREDWAPSLNPSTK-DEIKLPQVPFRI 527
           LC NL  NELPLKF                  TAREDW PS+  S   ++ ++  +  RI
Sbjct: 108 LCFNLSSNELPLKFSSGTSLHANEGGSIGIISTAREDWTPSVYSSGNIEDDEVSGISIRI 167

Query: 526 KGRVDDDTLDVRQPSQADWIKQYVEQQEEDEWETLASDAXXXXXXXXXXXXXXXXXIAKE 347
           KGR DDD++D RQ SQADWI+QYV QQEEDE +T   DA                 IAKE
Sbjct: 168 KGRRDDDSVDSRQQSQADWIRQYVAQQEEDESKTWEDDAVDDYSTKKVAEPRSYETIAKE 227

Query: 346 YHMARLEAMDAKQKKDKKRQEMAGNKIRKLKQEMSDLGLSDEILASGFGDECASYSMAND 167
           YH ARLEA+ AK+K DKK QE AG+ IRKLKQE+S LGLSD  L SGF  E AS   + D
Sbjct: 228 YHAARLEALSAKEKGDKKGQEQAGHIIRKLKQELSALGLSDNSLESGFRYEHASGFASED 287

Query: 166 AVSDSDICKGSEMTSLSDL 110
              +S   K  E  +L ++
Sbjct: 288 MSYNSMPEKHPEAITLCEV 306


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1509

 Score =  148 bits (374), Expect = 9e-34
 Identities = 104/256 (40%), Positives = 143/256 (55%), Gaps = 23/256 (8%)
 Frame = -2

Query: 700 LCLNLPGNELPLKFXXXXXXXXXXXXXXXXSTAREDWAPSLNPS-TKDEIKLPQVPFRIK 524
           LC NLPGNELP+KF                STARED  P++N + T++++++     RIK
Sbjct: 104 LCFNLPGNELPVKFSSGTSLYASEGSVSVVSTAREDRTPTVNAANTEEDVQVQAAFVRIK 163

Query: 523 GRVDDDT---LDVRQPS-QADWIKQYVEQQEEDEWETLASDAXXXXXXXXXXXXXXXXXI 356
           GR DDD      +RQPS QADWI+QY+EQQEE+E ET    A                 I
Sbjct: 164 GRRDDDDDNDTSLRQPSSQADWIRQYMEQQEEEESETWEDYAVDGSFTDKVPVPRSYDAI 223

Query: 355 AKEYHMARLEAMDAKQKKDKKRQEMAGNKIRKLKQEMSDLGLSDEILASGFGDECASYSM 176
           AKEY+ ARLEA+ AK+K DK+ QE +G+ IRKLKQE+S LGLSD++LA  F  E  S + 
Sbjct: 224 AKEYYAARLEAVKAKEKGDKRSQEQSGHIIRKLKQELSSLGLSDDVLAQEFVHEHTS-AF 282

Query: 175 ANDAVSDSDICKGSEMT-SLSDLGSRLNFI--SDEIETQDNN--------------HPTA 47
             + +S S +     +  + SD  S L F+  S+E+    N+                + 
Sbjct: 283 VPEGISTSSMPHEQLLAKTSSDAESNLVFVLPSEELPADPNDMESPSYMEFPVELAPSSV 342

Query: 46  PLQG-VNIEDEEADVE 2
           P+QG +++EDE AD+E
Sbjct: 343 PVQGKIDLEDETADME 358


>ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|222838999|gb|EEE77350.1|
           predicted protein [Populus trichocarpa]
          Length = 870

 Score =  141 bits (355), Expect = 1e-31
 Identities = 100/254 (39%), Positives = 129/254 (50%), Gaps = 21/254 (8%)
 Frame = -2

Query: 700 LCLNLPGNELPLKFXXXXXXXXXXXXXXXXS--TAREDWAPSLNPSTK--DEIKLPQVPF 533
           LCLNL GNELPLKF                   TAREDW P ++ S +   E +  +V  
Sbjct: 110 LCLNLAGNELPLKFSGGTSLNSDRGEWAVSVVSTAREDWVPYVDSSRRVEGEEEEQRVLV 169

Query: 532 RIKGRVDDD-----TLDVRQPSQADWIKQYVEQQEEDEWETLASDAXXXXXXXXXXXXXX 368
           R K R D++      LD RQPSQADWI+QYVEQQEE+E +T   D+              
Sbjct: 170 RTKARWDEEDGDGNVLDFRQPSQADWIRQYVEQQEEEESKTWEDDSDPQPRTYDVI---- 225

Query: 367 XXXIAKEYHMARLEAMDAKQKKDKKRQEMAGNKIRKLKQEMSDLGLSDEILASGFGDECA 188
               AKEYH  RLEA  AK+K DKK QE AG+ IRKLKQEMS LGLS ++L   FG +  
Sbjct: 226 ----AKEYHAVRLEATKAKEKGDKKSQEQAGHAIRKLKQEMSALGLSLDLLEQDFGHQ-- 279

Query: 187 SYSMANDAVSDSDICKGSEMTSLSDLGSRLNFISDEIETQD-----------NNHPTA-P 44
              ++ D  S S  C+  E  +  D+      +   ++  D           N  P++ P
Sbjct: 280 --HVSEDMFSTSTPCEHLEAITSLDVEGDSTIVESIVDENDLESSSSIGFPLNPVPSSVP 337

Query: 43  LQGVNIEDEEADVE 2
           L+G  + +E  DVE
Sbjct: 338 LEGEIVSEESEDVE 351


>gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thaliana]
          Length = 1453

 Score =  124 bits (312), Expect = 1e-26
 Identities = 89/247 (36%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
 Frame = -2

Query: 700 LCLNLPGNELPLKFXXXXXXXXXXXXXXXXS-TAREDWAPSLNPSTKDEIKLPQVPFRIK 524
           LCLNLP +ELP+KF                  T+R+DW  S + S + E + P V  R+K
Sbjct: 112 LCLNLPSHELPVKFSTGASRFPSTGGSVGVISTSRDDWNDSTDSSVRVEEEEPAVFVRVK 171

Query: 523 GRVDD-DTLDVRQPSQADWIKQYVEQQEEDEWETLASDAXXXXXXXXXXXXXXXXXIAKE 347
           G+ D+ DTL   + SQADWI+QY+ +QEE+E E    +                  IAKE
Sbjct: 172 GKQDEEDTLSSDKSSQADWIRQYMMRQEEEELECWEDEVDGIDPRNKVSGPRPFDVIAKE 231

Query: 346 YHMARLEAMDAKQKKDKKRQEMAGNKIRKLKQEMSDLGLSDEILASGFGDECASYSMA-- 173
           Y+ AR +A+ AK+K+DK+ QE AG  IRKLKQE+SDLGLS+ +L S F  E A  S    
Sbjct: 232 YYSARSDAIKAKEKRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQREHAFESATEQ 291

Query: 172 ------NDAVSDSDICKGSEMTSLSDLGSRLN----FISDEIETQDNNHPTAPLQGVNIE 23
                 +D + +S       +  L +L    N    + S+EI+T+     ++    V  +
Sbjct: 292 ESTCPISDNLHESVDADDVSVQMLDNLTLNTNPAESYESEEIQTKALPSSSSGQDFVASD 351

Query: 22  DEEADVE 2
           ++  DVE
Sbjct: 352 EDSEDVE 358


>ref|NP_176103.2| helicase associated domain-containing protein [Arabidopsis
           thaliana] gi|332195372|gb|AEE33493.1| helicase
           associated domain-containing protein [Arabidopsis
           thaliana]
          Length = 1459

 Score =  124 bits (312), Expect = 1e-26
 Identities = 89/247 (36%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
 Frame = -2

Query: 700 LCLNLPGNELPLKFXXXXXXXXXXXXXXXXS-TAREDWAPSLNPSTKDEIKLPQVPFRIK 524
           LCLNLP +ELP+KF                  T+R+DW  S + S + E + P V  R+K
Sbjct: 112 LCLNLPSHELPVKFSTGASRFPSTGGSVGVISTSRDDWNDSTDSSVRVEEEEPAVFVRVK 171

Query: 523 GRVDD-DTLDVRQPSQADWIKQYVEQQEEDEWETLASDAXXXXXXXXXXXXXXXXXIAKE 347
           G+ D+ DTL   + SQADWI+QY+ +QEE+E E    +                  IAKE
Sbjct: 172 GKQDEEDTLSSDKSSQADWIRQYMMRQEEEELECWEDEVDGIDPRNKVSGPRPFDVIAKE 231

Query: 346 YHMARLEAMDAKQKKDKKRQEMAGNKIRKLKQEMSDLGLSDEILASGFGDECASYSMA-- 173
           Y+ AR +A+ AK+K+DK+ QE AG  IRKLKQE+SDLGLS+ +L S F  E A  S    
Sbjct: 232 YYSARSDAIKAKEKRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQREHAFESATEQ 291

Query: 172 ------NDAVSDSDICKGSEMTSLSDLGSRLN----FISDEIETQDNNHPTAPLQGVNIE 23
                 +D + +S       +  L +L    N    + S+EI+T+     ++    V  +
Sbjct: 292 ESTCPISDNLHESVDADDVSVQMLDNLTLNTNPAESYESEEIQTKALPSSSSGQDFVASD 351

Query: 22  DEEADVE 2
           ++  DVE
Sbjct: 352 EDSEDVE 358