BLASTX nr result

ID: Cimicifuga21_contig00021698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021698
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vi...   207   1e-51
ref|XP_004149809.1| PREDICTED: N-glycosylase/DNA lyase-like [Cuc...   169   6e-40
ref|XP_002307451.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_003527943.1| PREDICTED: N-glycosylase/DNA lyase-like [Gly...   165   9e-39
ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Rici...   164   1e-38

>ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vinifera]
          Length = 399

 Score =  207 bits (528), Expect = 1e-51
 Identities = 120/207 (57%), Positives = 139/207 (67%), Gaps = 2/207 (0%)
 Frame = -3

Query: 615 MHSLRTLPIVMKRQRETPLISCNKTPNLPSTPPTPQTIQRTHLLNNP--NKXXXXXXSFK 442
           MHSL+ LP  MKR+R  P          PSTPPTP T+ +T + N+   +          
Sbjct: 1   MHSLK-LPPTMKRRRPIP--------QPPSTPPTP-TLLKTLVSNSKPTSNSSKKPMILI 50

Query: 441 KTKRTLIPKTPNNPKSEKPLNWEPLNLSKSELFLPLTFPTGQTFRWKQTGLTQFTGVVKS 262
           KT +T  P TP +PK      W PLN++KSEL L LTFPTGQTFRWKQT   Q+TGV+ S
Sbjct: 51  KTPQTPPPTTPISPK------WVPLNIAKSELSLALTFPTGQTFRWKQTTPLQYTGVIGS 104

Query: 261 HLISLKQLDDGNGGVAFFVHQSIDESKAREALNDFLNVGISLGEMWETFSASDSRFLDVA 82
           HLISLK L   NG VA+ +HQS  E  AR AL DFLNVGISL EMWE F ASDSRF ++A
Sbjct: 105 HLISLKHLQ--NGDVAYLIHQSPSEENARSALLDFLNVGISLSEMWEVFKASDSRFAELA 162

Query: 81  SCLGGARVLRQDPVECLMQFLCSSNNN 1
             LGGARVLRQDP+ECL+QFLCSSNNN
Sbjct: 163 QYLGGARVLRQDPLECLIQFLCSSNNN 189


>ref|XP_004149809.1| PREDICTED: N-glycosylase/DNA lyase-like [Cucumis sativus]
          Length = 393

 Score =  169 bits (427), Expect = 6e-40
 Identities = 103/204 (50%), Positives = 124/204 (60%), Gaps = 10/204 (4%)
 Frame = -3

Query: 582 KRQRETPLISCNKTPNLPS-TPPTPQ-------TIQRTHLLNNPNKXXXXXXSFKKTKRT 427
           KR + TP  + +  P+ P  +PPTPQ       T+   H   NPNK              
Sbjct: 3   KRLKPTPPSTPSTKPSPPPPSPPTPQLSHSKPTTVSLHHSSKNPNKTLP----------- 51

Query: 426 LIPKTPNNPKSEKPLNWEPLNLSKSELFLPLTFPTGQTFRWKQTGLTQFTGVVKSHLISL 247
            + K+P +P S    NW  LNL++S+L LPLTFPTGQTFRWKQT   +FTGVV SHLISL
Sbjct: 52  -LLKSPQSPSSS---NWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPFEFTGVVGSHLISL 107

Query: 246 KQLDDGNGGVAFFVHQSIDESK--AREALNDFLNVGISLGEMWETFSASDSRFLDVASCL 73
             L   NG V++ +H S   S   AR AL DFLN  ISL  +WE FSA+D RF  +A   
Sbjct: 108 NHLP--NGDVSYCLHFSSTSSSAAARLALLDFLNASISLSSIWEVFSAADPRFDALARHF 165

Query: 72  GGARVLRQDPVECLMQFLCSSNNN 1
            GARVLRQDP+ECL+QFLCSSNNN
Sbjct: 166 EGARVLRQDPLECLIQFLCSSNNN 189


>ref|XP_002307451.1| predicted protein [Populus trichocarpa] gi|222856900|gb|EEE94447.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  167 bits (424), Expect = 1e-39
 Identities = 97/195 (49%), Positives = 116/195 (59%)
 Frame = -3

Query: 585 MKRQRETPLISCNKTPNLPSTPPTPQTIQRTHLLNNPNKXXXXXXSFKKTKRTLIPKTPN 406
           MKR R TP  +   T      PP P   Q  H             S KK ++ +      
Sbjct: 1   MKRARPTPPPATPTTSRSSPIPPLPTPPQPRH-------------SSKKHQKIIF----- 42

Query: 405 NPKSEKPLNWEPLNLSKSELFLPLTFPTGQTFRWKQTGLTQFTGVVKSHLISLKQLDDGN 226
                KP NW P+NL++SEL LPLTFPTGQTFRWKQTG  Q+TG +  HLISLK     N
Sbjct: 43  -----KPTNWAPVNLTQSELSLPLTFPTGQTFRWKQTGPLQYTGSLGRHLISLKHHQ--N 95

Query: 225 GGVAFFVHQSIDESKAREALNDFLNVGISLGEMWETFSASDSRFLDVASCLGGARVLRQD 46
           G V + +H S  +S A+ AL  FLN  ISL EMW  F+A+DSRF ++A    GARVLRQD
Sbjct: 96  GDVYYQIHHSPSQSAAKSALLSFLNTNISLTEMWHGFAAADSRFAELAQHFKGARVLRQD 155

Query: 45  PVECLMQFLCSSNNN 1
           P+ECL+QFLCSSNNN
Sbjct: 156 PLECLIQFLCSSNNN 170


>ref|XP_003527943.1| PREDICTED: N-glycosylase/DNA lyase-like [Glycine max]
          Length = 395

 Score =  165 bits (417), Expect = 9e-39
 Identities = 95/194 (48%), Positives = 114/194 (58%)
 Frame = -3

Query: 582 KRQRETPLISCNKTPNLPSTPPTPQTIQRTHLLNNPNKXXXXXXSFKKTKRTLIPKTPNN 403
           + Q+ TP       P  PSTPPTPQT Q  H LN                          
Sbjct: 7   RSQKHTP------PPPPPSTPPTPQT-QARHSLN-------------------------- 33

Query: 402 PKSEKPLNWEPLNLSKSELFLPLTFPTGQTFRWKQTGLTQFTGVVKSHLISLKQLDDGNG 223
             + K   W PL+L++ EL LPLTFPTGQTF WK T  +Q+TGVV  HLISLK L   NG
Sbjct: 34  --TAKARAWAPLSLTRHELSLPLTFPTGQTFLWKNTAPSQYTGVVGPHLISLKHLQ--NG 89

Query: 222 GVAFFVHQSIDESKAREALNDFLNVGISLGEMWETFSASDSRFLDVASCLGGARVLRQDP 43
            V++ +H       A  AL DFLN  +SL ++W+TFSASD+RF ++A  L GARVLRQDP
Sbjct: 90  DVSYCLHSPSHSDTAETALLDFLNATVSLADLWKTFSASDARFAELAHHLSGARVLRQDP 149

Query: 42  VECLMQFLCSSNNN 1
            ECL+QFLCSSNNN
Sbjct: 150 FECLIQFLCSSNNN 163


>ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Ricinus communis]
           gi|223540555|gb|EEF42122.1| 8-oxoguanine DNA
           glycosylase, putative [Ricinus communis]
          Length = 412

 Score =  164 bits (416), Expect = 1e-38
 Identities = 95/181 (52%), Positives = 117/181 (64%)
 Frame = -3

Query: 543 TPNLPSTPPTPQTIQRTHLLNNPNKXXXXXXSFKKTKRTLIPKTPNNPKSEKPLNWEPLN 364
           TP+ P+TPP  QTI+ T                +K K++LI       K     NW  LN
Sbjct: 19  TPS-PTTPP--QTIKITS---------------RKHKKSLI-------KPITTTNWNALN 53

Query: 363 LSKSELFLPLTFPTGQTFRWKQTGLTQFTGVVKSHLISLKQLDDGNGGVAFFVHQSIDES 184
           L++SEL LPLTFPTGQTFRWKQTG  Q+TG +  HLISLK     NG V + +H +  E+
Sbjct: 54  LTQSELSLPLTFPTGQTFRWKQTGHHQYTGTLGPHLISLKHHHQ-NGNVYYHIHTTPSET 112

Query: 183 KAREALNDFLNVGISLGEMWETFSASDSRFLDVASCLGGARVLRQDPVECLMQFLCSSNN 4
            A+ AL DFLN+ +SL  +W  FSASDSRF ++A  L GARVLRQDP+ECL+QFLCSSNN
Sbjct: 113 AAKSALLDFLNINVSLANIWADFSASDSRFAELAMHLKGARVLRQDPLECLIQFLCSSNN 172

Query: 3   N 1
           N
Sbjct: 173 N 173


Top