BLASTX nr result

ID: Cimicifuga21_contig00021696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021696
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating en...    47   6e-08
ref|XP_003542749.1| PREDICTED: probable ubiquitin-conjugating en...    45   2e-07
ref|XP_003543046.1| PREDICTED: probable ubiquitin-conjugating en...    47   3e-07
ref|XP_004155565.1| PREDICTED: LOW QUALITY PROTEIN: probable ubi...    47   3e-07
ref|XP_004134704.1| PREDICTED: probable ubiquitin-conjugating en...    47   3e-07

>ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Vitis
           vinifera] gi|297735992|emb|CBI23966.3| unnamed protein
           product [Vitis vinifera]
          Length = 944

 Score = 47.4 bits (111), Expect(2) = 6e-08
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
 Frame = +2

Query: 149 VVKDSQYPCYLGHRVWIKKSSVF--------CWKEKYVEDTEYHVEAGMVQVDWVASAMI 304
           +++D QY  Y G RV ++ S++          WKE   + T   VEAG+V VDW+ASA++
Sbjct: 156 LLEDPQYQYYPGQRVQVRLSTLSKSARWLCGAWKENRTDGTVCAVEAGLVSVDWLASALV 215

Query: 305 G 307
           G
Sbjct: 216 G 216



 Score = 34.3 bits (77), Expect(2) = 6e-08
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +3

Query: 312 FTHANWQLGDWC 347
           F+HANWQLGDWC
Sbjct: 239 FSHANWQLGDWC 250


>ref|XP_003542749.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Glycine max]
          Length = 933

 Score = 45.4 bits (106), Expect(2) = 2e-07
 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
 Frame = +2

Query: 155 KDSQYPCYLGHRVWIKKSSV------FC--WKEKYVEDTEYHVEAGMVQVDWVASAMIG 307
           +DSQ+P Y G RV +K SS        C  W++ + E T   VEAG+V V+W++  ++G
Sbjct: 158 EDSQFPYYPGQRVKVKSSSASKSTRWLCDTWRDNHDEGTVCAVEAGLVYVNWISHVLVG 216



 Score = 34.3 bits (77), Expect(2) = 2e-07
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +3

Query: 312 FTHANWQLGDWC 347
           F+HANWQLGDWC
Sbjct: 239 FSHANWQLGDWC 250


>ref|XP_003543046.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Glycine max]
          Length = 919

 Score = 46.6 bits (109), Expect(2) = 3e-07
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
 Frame = +2

Query: 152 VKDSQYPCYLGHRVWIKKSSVF--------CWKEKYVEDTEYHVEAGMVQVDWVASAMIG 307
           ++DSQYP Y G RV +  S+           WK+ + E T   VEAG+V V+W+AS ++G
Sbjct: 157 LEDSQYPYYPGQRVKVNTSTASKPARWLGGTWKDNHDEGTVCAVEAGLVYVNWLASVLLG 216



 Score = 32.7 bits (73), Expect(2) = 3e-07
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +3

Query: 312 FTHANWQLGDWC 347
           F+H NWQLGDWC
Sbjct: 239 FSHTNWQLGDWC 250


>ref|XP_004155565.1| PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin-conjugating
           enzyme E2 24-like [Cucumis sativus]
          Length = 910

 Score = 47.0 bits (110), Expect(2) = 3e-07
 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
 Frame = +2

Query: 149 VVKDSQYPCYLGHRVWIKKSS-----VFCWKEKYVEDTEYHVEAGMVQVDWVASAMIG 307
           V+ DSQYP Y G RV     S     +  WK+   E T   VEAG+V VDW+AS ++G
Sbjct: 155 VLDDSQYPYYPGQRVRFSNVSKPPGWLSGWKDDRCEGTVCSVEAGLVYVDWLASVLMG 212



 Score = 32.3 bits (72), Expect(2) = 3e-07
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +3

Query: 312 FTHANWQLGDWC 347
           F+HANW LGDWC
Sbjct: 235 FSHANWNLGDWC 246


>ref|XP_004134704.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Cucumis sativus]
          Length = 910

 Score = 47.0 bits (110), Expect(2) = 3e-07
 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
 Frame = +2

Query: 149 VVKDSQYPCYLGHRVWIKKSS-----VFCWKEKYVEDTEYHVEAGMVQVDWVASAMIG 307
           V+ DSQYP Y G RV     S     +  WK+   E T   VEAG+V VDW+AS ++G
Sbjct: 155 VLDDSQYPYYPGQRVRFSNVSKPPGWLSGWKDDRCEGTVCSVEAGLVYVDWLASVLMG 212



 Score = 32.3 bits (72), Expect(2) = 3e-07
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +3

Query: 312 FTHANWQLGDWC 347
           F+HANW LGDWC
Sbjct: 235 FSHANWNLGDWC 246


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