BLASTX nr result

ID: Cimicifuga21_contig00021664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021664
         (1579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis] g...   460   e-127
ref|XP_002273698.2| PREDICTED: charged multivesicular body prote...   456   e-125
emb|CBI37046.3| unnamed protein product [Vitis vinifera]              456   e-125
ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|2...   452   e-124
ref|XP_002876659.1| SNF7 family protein [Arabidopsis lyrata subs...   425   e-116

>ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis]
            gi|223545649|gb|EEF47153.1| Protein CHMP7, putative
            [Ricinus communis]
          Length = 438

 Score =  460 bits (1183), Expect = e-127
 Identities = 246/427 (57%), Positives = 320/427 (74%), Gaps = 6/427 (1%)
 Frame = -2

Query: 1488 NSSVVEYIRQEVPDWDDEVVATARFKAFSGQRSDWELKFVFWRDLILKVARHLGVFIIQP 1309
            +S V+E+I +EV DW++EV+ATARFKAFSGQRSDWE K+ FWR+LILK+ARHLG+F I+P
Sbjct: 3    SSMVMEFICKEVSDWNEEVIATARFKAFSGQRSDWEPKYQFWRNLILKIARHLGLFTIRP 62

Query: 1308 SQVR-DWFNRGGLTPLCIDRVLLEMYNTREILRKEDLVDPSSGRLSQLLKRVVHLMGIST 1132
             QV+ +WFNRGGLTPLC+D VL  MY   +I+R  D+VD +SGR SQL ++V +L+  ST
Sbjct: 63   CQVKNEWFNRGGLTPLCLDHVLFLMYTEGDIIRNVDVVDATSGRFSQLYRKVTNLVIRST 122

Query: 1131 WSASEFSEDCFILQTLLVERATEVVKLLSESHWTSFCIITMTKFQNLCNGPNESSAVLSY 952
             +     ED  IL  LL E+A +V+KLLSE+HWT+ C++TM KFQ++C GPNE+S VLSY
Sbjct: 123  TTPDLLLEDNLILTPLLKEKADQVIKLLSENHWTTSCVVTMRKFQDMCGGPNEASVVLSY 182

Query: 951  LSANGKAQLLSIKKKDFIEGVKVSLXXXXXXXVSTFDCNLLHLIWTSEKLQLQLDVIDQR 772
             S  GKAQ LS+ KK+F+EG+KVSL       +S+ D ++LHLIWT+EKLQ Q+DVIDQR
Sbjct: 183  FSGVGKAQYLSVCKKEFVEGIKVSLSSALVPAISSLDFDVLHLIWTAEKLQQQIDVIDQR 242

Query: 771  YEMSRSSALASIKSGNRQVALRHARQIKLTCQSRDKCTSLLNRVEEVLSVIANAESTKKV 592
            YE+SR+SALA +KSGN+++ALRHAR +KL   SR+KCTSL NRVEEVL++IA+AESTKKV
Sbjct: 243  YELSRNSALAYLKSGNKKMALRHARDMKLASDSREKCTSLFNRVEEVLNIIADAESTKKV 302

Query: 591  SEAIQIGAQAIKECGISMEEVQDCLEELDESVYSQKQVEEALASTSLPYT-----DVEEE 427
            +EAIQIGAQA+K+  I++EEV  CLEEL+E++ SQKQVE+AL ST   YT     D+EEE
Sbjct: 303  TEAIQIGAQAMKQNKITVEEVDLCLEELEENIDSQKQVEKALESTP-SYTVIEDEDIEEE 361

Query: 426  FKKLEMEVGGEILQEKTSTTGSTKLEESLESAGSVGKTVSNIIKAADIENSADSLSNTLS 247
            FKKLEMEVG   LQ      G          + + G+T +++        S DSLS+ LS
Sbjct: 362  FKKLEMEVGTVDLQSPVPRIG---------MSSTSGETDNSV--------STDSLSDALS 404

Query: 246  TLQLEAA 226
             L+L+ A
Sbjct: 405  NLKLQDA 411


>ref|XP_002273698.2| PREDICTED: charged multivesicular body protein 7 [Vitis vinifera]
          Length = 478

 Score =  456 bits (1172), Expect = e-125
 Identities = 254/437 (58%), Positives = 315/437 (72%), Gaps = 16/437 (3%)
 Frame = -2

Query: 1488 NSSVVEYIRQEVPDWDDEVVATARFKAFSGQRSDWELKFVFWRDLILKVARHLGVFIIQP 1309
            + +V E+IR+EV DW++E +ATARFKAFSGQRSDWE ++ FWRDLILKVARH  +  I  
Sbjct: 43   SEAVREFIRREVKDWEEEAIATARFKAFSGQRSDWEARYQFWRDLILKVARHFHLLFISS 102

Query: 1308 SQVR-DWFNRGGLTPLCIDRVLLEMYNTREILRKEDLVDPSSGRLSQLLKRVVHLMGIST 1132
            SQV+ DWFNRGGLTPLC+D VL  MYN  +I+R  DLVDP+SGRLSQL ++V H+M  ST
Sbjct: 103  SQVKKDWFNRGGLTPLCLDHVLFLMYNEGDIIRSVDLVDPTSGRLSQLFRKVKHMMVRST 162

Query: 1131 WSASEFSEDCFILQTLLVERATEVVKLLSESHWTSFCIITMTKFQNLCNGPNESSAVLSY 952
             SA    ED  IL  LL ++  EVVK+LSES WTS C+ITM KFQ++C G  E+SAVLSY
Sbjct: 163  -SAEVMFEDHLILLPLLKDKTVEVVKVLSESQWTSSCVITMKKFQDICGGTREASAVLSY 221

Query: 951  LSANGKAQLLSIKKKDFIEGVKVSLXXXXXXXVSTFDCNLLHLIWTSEKLQLQLDVIDQR 772
            LS  GKAQ LSI KK+ IEGVKVSL        ++ D ++LHL WT+E LQ QLDVIDQR
Sbjct: 222  LSGCGKAQYLSISKKELIEGVKVSLSAAAVSGTTSLDLDVLHLTWTTENLQQQLDVIDQR 281

Query: 771  YEMSRSSALASIKSGNRQVALRHARQIKLTCQSRDKCTSLLNRVEEVLSVIANAESTKKV 592
             E+S+ +ALAS+ SGN++VALRHA+ +KL  +SR+KC S LNRVEEVLS+IANAESTKKV
Sbjct: 282  CEVSKKAALASLNSGNKKVALRHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKV 341

Query: 591  SEAIQIGAQAIKECGISMEEVQDCLEELDESVYSQKQVEEALASTSLPYT-----DVEEE 427
            SEAIQIGA+AI+E  I +EEVQ CL+EL +S+ SQKQVEEALA +   Y      D+EEE
Sbjct: 342  SEAIQIGARAIQENRIDVEEVQRCLQELGDSIDSQKQVEEALAESDPSYVDIEDEDIEEE 401

Query: 426  FKKLEMEVGGEILQEKTS------TTGSTKLEESLES---AGSVGKTVSNIIKAADIENS 274
            F+KLE+E+G + LQ   S        G T+  ES +S   A S  K   N  + + I NS
Sbjct: 402  FRKLELELGNQNLQILVSQAGVDTAAGETEASESSKSLCDALSDLKLADNATRGSTILNS 461

Query: 273  ADSLSNTLS-TLQLEAA 226
              S  + +S  L+LEAA
Sbjct: 462  TGSKRDNISKNLKLEAA 478


>emb|CBI37046.3| unnamed protein product [Vitis vinifera]
          Length = 438

 Score =  456 bits (1172), Expect = e-125
 Identities = 254/437 (58%), Positives = 315/437 (72%), Gaps = 16/437 (3%)
 Frame = -2

Query: 1488 NSSVVEYIRQEVPDWDDEVVATARFKAFSGQRSDWELKFVFWRDLILKVARHLGVFIIQP 1309
            + +V E+IR+EV DW++E +ATARFKAFSGQRSDWE ++ FWRDLILKVARH  +  I  
Sbjct: 3    SEAVREFIRREVKDWEEEAIATARFKAFSGQRSDWEARYQFWRDLILKVARHFHLLFISS 62

Query: 1308 SQVR-DWFNRGGLTPLCIDRVLLEMYNTREILRKEDLVDPSSGRLSQLLKRVVHLMGIST 1132
            SQV+ DWFNRGGLTPLC+D VL  MYN  +I+R  DLVDP+SGRLSQL ++V H+M  ST
Sbjct: 63   SQVKKDWFNRGGLTPLCLDHVLFLMYNEGDIIRSVDLVDPTSGRLSQLFRKVKHMMVRST 122

Query: 1131 WSASEFSEDCFILQTLLVERATEVVKLLSESHWTSFCIITMTKFQNLCNGPNESSAVLSY 952
             SA    ED  IL  LL ++  EVVK+LSES WTS C+ITM KFQ++C G  E+SAVLSY
Sbjct: 123  -SAEVMFEDHLILLPLLKDKTVEVVKVLSESQWTSSCVITMKKFQDICGGTREASAVLSY 181

Query: 951  LSANGKAQLLSIKKKDFIEGVKVSLXXXXXXXVSTFDCNLLHLIWTSEKLQLQLDVIDQR 772
            LS  GKAQ LSI KK+ IEGVKVSL        ++ D ++LHL WT+E LQ QLDVIDQR
Sbjct: 182  LSGCGKAQYLSISKKELIEGVKVSLSAAAVSGTTSLDLDVLHLTWTTENLQQQLDVIDQR 241

Query: 771  YEMSRSSALASIKSGNRQVALRHARQIKLTCQSRDKCTSLLNRVEEVLSVIANAESTKKV 592
             E+S+ +ALAS+ SGN++VALRHA+ +KL  +SR+KC S LNRVEEVLS+IANAESTKKV
Sbjct: 242  CEVSKKAALASLNSGNKKVALRHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKV 301

Query: 591  SEAIQIGAQAIKECGISMEEVQDCLEELDESVYSQKQVEEALASTSLPYT-----DVEEE 427
            SEAIQIGA+AI+E  I +EEVQ CL+EL +S+ SQKQVEEALA +   Y      D+EEE
Sbjct: 302  SEAIQIGARAIQENRIDVEEVQRCLQELGDSIDSQKQVEEALAESDPSYVDIEDEDIEEE 361

Query: 426  FKKLEMEVGGEILQEKTS------TTGSTKLEESLES---AGSVGKTVSNIIKAADIENS 274
            F+KLE+E+G + LQ   S        G T+  ES +S   A S  K   N  + + I NS
Sbjct: 362  FRKLELELGNQNLQILVSQAGVDTAAGETEASESSKSLCDALSDLKLADNATRGSTILNS 421

Query: 273  ADSLSNTLS-TLQLEAA 226
              S  + +S  L+LEAA
Sbjct: 422  TGSKRDNISKNLKLEAA 438


>ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|222844537|gb|EEE82084.1|
            predicted protein [Populus trichocarpa]
          Length = 436

 Score =  452 bits (1162), Expect = e-124
 Identities = 237/401 (59%), Positives = 314/401 (78%), Gaps = 6/401 (1%)
 Frame = -2

Query: 1485 SSVVEYIRQEVPDWDDEVVATARFKAFSGQRSDWELKFVFWRDLILKVARHLGVFIIQPS 1306
            SSV E+IR++VPDWDDE++ATARFKAFSGQRSDWE K++FW+DLILK+ARHL +FIIQPS
Sbjct: 5    SSVKEFIRKQVPDWDDEIMATARFKAFSGQRSDWEPKYLFWKDLILKIARHLDLFIIQPS 64

Query: 1305 QVRD-WFNRGGLTPLCIDRVLLEMYNTREILRKEDLVDPSSGRLSQLLKRVVHLMGISTW 1129
            QV++ WFNRGGLTPLC+D VL  MYN  +I+R  DLVDPSSGR+SQL ++V +LM  S  
Sbjct: 65   QVKEKWFNRGGLTPLCLDHVLCLMYNEGDIVRNVDLVDPSSGRISQLFRKVRNLMVRSPV 124

Query: 1128 SASEFS-EDCFILQTLLVERATEVVKLLSESHWTSFCIITMTKFQNLCNGPNESSAVLSY 952
            +      ED   L  LL ++  +++K LSESHWTS CIITM+KFQ +C GP+E++ +LSY
Sbjct: 125  TPEIIMLEDHLFLTPLLKDKTAQIIKCLSESHWTSSCIITMSKFQGMCGGPSEAAPLLSY 184

Query: 951  LSANGKAQLLSIKKKDFIEGVKVSLXXXXXXXVSTFDCNLLHLIWTSEKLQLQLDVIDQR 772
            LS  GKAQ  SI K + IEGVK+SL       +S+ D ++LHLIWT++KL+ Q+DVID+R
Sbjct: 185  LSGLGKAQYFSISK-EVIEGVKISLSSASVPAISSLDLDVLHLIWTAQKLEDQIDVIDRR 243

Query: 771  YEMSRSSALASIKSGNRQVALRHARQIKLTCQSRDKCTSLLNRVEEVLSVIANAESTKKV 592
            YEMSR SALAS+ SGN++VALRHAR++KL  +SR++CTSLLNRVEEVL+VIANAEST+KV
Sbjct: 244  YEMSRKSALASLNSGNKKVALRHAREMKLALESRERCTSLLNRVEEVLNVIANAESTQKV 303

Query: 591  SEAIQIGAQAIKECGISMEEVQDCLEELDESVYSQKQVEEALAS---TSLPYTDVEEEFK 421
            +EAI+IGA+A+K+  I++EEV++CLEEL+ES+ +QKQVE+AL S   + +   D+EEE +
Sbjct: 304  TEAIRIGAEAMKQNKITVEEVENCLEELEESIDAQKQVEKALESNPISGIEDEDIEEELE 363

Query: 420  KLEMEVGGEILQEKTSTTGSTKLE-ESLESAGSVGKTVSNI 301
            KLE+E+  E LQ      G+T  E ++L S  S+   +SN+
Sbjct: 364  KLELELESENLQISKVEVGNTSGEMDALGSPDSLTDALSNL 404


>ref|XP_002876659.1| SNF7 family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297322497|gb|EFH52918.1| SNF7 family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 423

 Score =  425 bits (1092), Expect = e-116
 Identities = 224/404 (55%), Positives = 296/404 (73%), Gaps = 4/404 (0%)
 Frame = -2

Query: 1488 NSSVVEYIRQEVPDWDDEVVATARFKAFSGQRSDWELKFVFWRDLILKVARHLGVFIIQP 1309
            + +V E+IR+EVPDWDDEVV TARFKAFSGQRSDWELKF FWRDLILKV+R  G+FII P
Sbjct: 3    SEAVKEFIRREVPDWDDEVVTTARFKAFSGQRSDWELKFQFWRDLILKVSRQFGLFIIDP 62

Query: 1308 SQVRD-WFNRGGLTPLCIDRVLLEMYNTREILRKEDLVDPSSGRLSQLLKRVVHLMGIST 1132
             +V+  WFNRGG+TPLCID VLL M++  +++R  D+ DP SGR+S+LL+ V +LM   +
Sbjct: 63   VKVKKAWFNRGGITPLCIDHVLLLMHSEGDVVRISDIDDPGSGRISRLLRTVRNLMVRQS 122

Query: 1131 WSASEFSEDCFILQTLLVERATEVVKLLSESHWTSFCIITMTKFQNLCNGPNESSAVLSY 952
                E  E   +   LL E+A +VV +LSE HWTS C++T+ KF+NLCNG NE+SAVLS+
Sbjct: 123  VKPEEILETKLVFVPLLKEKAADVVNILSEGHWTSTCVVTLKKFRNLCNGSNEASAVLSH 182

Query: 951  LSANGKAQLLSIKKKDFIEGVKVSLXXXXXXXVSTFDCNLLHLIWTSEKLQLQLDVIDQR 772
            LS  GKA  +SI + + IEGVKVS        +ST DC++LHL+ T+EKLQ QL+V+DQR
Sbjct: 183  LSGCGKAHKISINRGELIEGVKVSFSQAALPSISTLDCDILHLLRTTEKLQDQLEVMDQR 242

Query: 771  YEMSRSSALASIKSGNRQVALRHARQIKLTCQSRDKCTSLLNRVEEVLSVIANAESTKKV 592
             E S+ SALAS+KSG+R+VALRHAR++KL  +SR+KCTSLLNRVEEVL+ IA++ESTK V
Sbjct: 243  CEKSKKSALASLKSGHRKVALRHARELKLATESREKCTSLLNRVEEVLNTIADSESTKMV 302

Query: 591  SEAIQIGAQAIKECGISMEEVQDCLEELDESVYSQKQVEEALASTSLPYTD---VEEEFK 421
            SEAI+ GA+ +K+  IS ++V D LEEL+E++ SQKQVE+AL S   P TD   +EEE  
Sbjct: 303  SEAIKTGARVMKDVKISADDVHDYLEELEETIESQKQVEKALESAPYPDTDDENIEEELL 362

Query: 420  KLEMEVGGEILQEKTSTTGSTKLEESLESAGSVGKTVSNIIKAA 289
            +LEM++  E  Q   +T+ +      + S   +GKT   + + A
Sbjct: 363  ELEMDLESESSQVLPATSDTADSLTEMFSELKLGKTKQTLEEQA 406


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