BLASTX nr result

ID: Cimicifuga21_contig00021652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021652
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG15858.1| harpin-induced protein [Bruguiera gymnorhiza]          61   1e-07
ref|XP_002532540.1| syntaxin, plant, putative [Ricinus communis]...    58   7e-07
gb|ABZ80409.1| hairpin-inducing protein [Casuarina glauca]             55   8e-06

>dbj|BAG15858.1| harpin-induced protein [Bruguiera gymnorhiza]
          Length = 200

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = +1

Query: 133 MAEAKQPILNGAFYGPSIPPQQSYHRHGRSRGFCCGPCCLLSFLCK 270
           MAE KQP LNGA+YGP+IPP ++YHR G   G  CG CCLLSFL K
Sbjct: 1   MAE-KQPHLNGAYYGPAIPPPKNYHRPGGRSGSGCG-CCLLSFLFK 44


>ref|XP_002532540.1| syntaxin, plant, putative [Ricinus communis]
           gi|223527729|gb|EEF29834.1| syntaxin, plant, putative
           [Ricinus communis]
          Length = 219

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/46 (71%), Positives = 35/46 (76%)
 Frame = +1

Query: 133 MAEAKQPILNGAFYGPSIPPQQSYHRHGRSRGFCCGPCCLLSFLCK 270
           MAE KQ  LNGA+YGP+IPP QSYHR GRS G  CG CCLLS L K
Sbjct: 1   MAE-KQAQLNGAYYGPAIPPPQSYHRPGRS-GCGCG-CCLLSCLLK 43


>gb|ABZ80409.1| hairpin-inducing protein [Casuarina glauca]
          Length = 225

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = +1

Query: 133 MAEAKQPILNGAFYGPSIPPQ-QSYHRHGRSRGFCCGPCCLLSFLCK 270
           MAE KQ  LNGA+YGP++PP  QSYHR GRS G  CG  C   FL K
Sbjct: 1   MAE-KQTNLNGAYYGPAVPPPPQSYHRPGRSGGRGCGCACFFCFLLK 46


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