BLASTX nr result

ID: Cimicifuga21_contig00021628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021628
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60916.1| hypothetical protein VITISV_014386 [Vitis vinifera]    47   2e-09
emb|CAN68654.1| hypothetical protein VITISV_005743 [Vitis vinifera]    43   2e-08
emb|CAN71190.1| hypothetical protein VITISV_019118 [Vitis vinifera]    42   8e-08
emb|CAN70399.1| hypothetical protein VITISV_023214 [Vitis vinifera]    44   9e-08
emb|CAN78730.1| hypothetical protein VITISV_020014 [Vitis vinifera]    45   1e-07

>emb|CAN60916.1| hypothetical protein VITISV_014386 [Vitis vinifera]
          Length = 257

 Score = 46.6 bits (109), Expect(3) = 2e-09
 Identities = 25/51 (49%), Positives = 34/51 (66%)
 Frame = -1

Query: 910 PCGRGNA*LTKGVGIELIKRNLSNLPVYCLSLLTIPVSVAKKLEELMHDSL 758
           P G+GN  L KG  I LIK  L+++P+Y +SL  +P  VAK+LE+L  D L
Sbjct: 94  PVGKGNIYL-KGEHITLIKSTLASMPIYLMSLFRMPKIVAKRLEKLQRDFL 143



 Score = 40.8 bits (94), Expect(3) = 2e-09
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = -2

Query: 738 RRYQLISWDKVCMSKDVGGLGIWKPRGLT*SLLCKNMWLFGXXXECL*KR 589
           R+  LI+W+ VC  K+ GGLGI K   L  +LL K +W+F    + L KR
Sbjct: 151 RKVHLINWEVVCTQKEKGGLGIRKIDPLNKALLGKWIWIFAYEKDNLWKR 200



 Score = 20.8 bits (42), Expect(3) = 2e-09
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 566 DGLGWCTKSVNSSYG 522
           +G GW TK    ++G
Sbjct: 209 EGFGWRTKKARETFG 223


>emb|CAN68654.1| hypothetical protein VITISV_005743 [Vitis vinifera]
          Length = 516

 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 23/50 (46%), Positives = 32/50 (64%)
 Frame = -2

Query: 738 RRYQLISWDKVCMSKDVGGLGIWKPRGLT*SLLCKNMWLFGXXXECL*KR 589
           R+  L+SW+KVC+SK+ GGLG+ K   L  +LL K +W F    + L KR
Sbjct: 86  RKAHLVSWEKVCVSKEKGGLGLRKIVQLNKALLGKWVWRFAWAKDELWKR 135



 Score = 42.0 bits (97), Expect(2) = 2e-08
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -1

Query: 886 LTKGVGIELIKRNLSNLPVYCLSLLTIPVSVAKKLEELMHDSL 758
           L+KG  I LIK  L+++P+Y LSL  +P  VA++LE+L  D L
Sbjct: 36  LSKGGRITLIKSTLASMPLYQLSLFCMPKGVARRLEKLQRDFL 78


>emb|CAN71190.1| hypothetical protein VITISV_019118 [Vitis vinifera]
          Length = 372

 Score = 42.0 bits (97), Expect(2) = 8e-08
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -1

Query: 886 LTKGVGIELIKRNLSNLPVYCLSLLTIPVSVAKKLEELMHDSL 758
           L+KG  I LIK  L+++P+Y LSL  +P  VA++LE+L  D L
Sbjct: 87  LSKGGRITLIKSTLASMPLYQLSLFRMPKGVARRLEKLQRDFL 129



 Score = 41.2 bits (95), Expect(2) = 8e-08
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = -2

Query: 738 RRYQLISWDKVCMSKDVGGLGIWKPRGLT*SLLCKNMWLF 619
           R+  L+SW+KVC+SK+ GGLG+ K   L  + L K +W F
Sbjct: 137 RKAHLVSWEKVCVSKEKGGLGLRKIAQLNKAXLGKWVWRF 176


>emb|CAN70399.1| hypothetical protein VITISV_023214 [Vitis vinifera]
          Length = 844

 Score = 44.3 bits (103), Expect(3) = 9e-08
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -1

Query: 886 LTKGVGIELIKRNLSNLPVYCLSLLTIPVSVAKKLEELMHDSL 758
           L+KG    LI+  LSNLP+Y +SLL +P SV ++LE++  D L
Sbjct: 660 LSKGGRATLIRSTLSNLPIYLMSLLCLPSSVRRRLEKIQRDFL 702



 Score = 34.3 bits (77), Expect(3) = 9e-08
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -2

Query: 738 RRYQLISWDKVCMSKDVGGLGIWKPRGLT*SLLCKNMWLF 619
           R+  L+ W+ VC+SK  GGLG+     L  +LL K  W F
Sbjct: 710 RKPHLVRWELVCLSKSKGGLGVKCLSLLNKALLAKWNWRF 749



 Score = 23.5 bits (49), Expect(3) = 9e-08
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 557 GWCTKSVNSSYGRSF*RGI 501
           GWC++ V  ++G    +GI
Sbjct: 771 GWCSREVREAHGMGLWKGI 789


>emb|CAN78730.1| hypothetical protein VITISV_020014 [Vitis vinifera]
          Length = 342

 Score = 44.7 bits (104), Expect(3) = 1e-07
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = -1

Query: 886 LTKGVGIELIKRNLSNLPVYCLSLLTIPVSVAKKLEELMHDSL 758
           ++KG  I LIK  L+++P+Y LSL  +P SVAK+LE+L  D L
Sbjct: 50  ISKGGRITLIKSTLASIPIYQLSLFRMPKSVAKRLEKLQRDFL 92



 Score = 37.0 bits (84), Expect(3) = 1e-07
 Identities = 21/50 (42%), Positives = 27/50 (54%)
 Frame = -2

Query: 738 RRYQLISWDKVCMSKDVGGLGIWKPRGLT*SLLCKNMWLFGXXXECL*KR 589
           R+  LI+W+ VC  K  GGLGI K   L  +LL K +W F      L K+
Sbjct: 100 RKIHLINWEVVCTQKVKGGLGIRKIDLLNKALLSKWIWRFAFEEGTLWKK 149



 Score = 20.4 bits (41), Expect(3) = 1e-07
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 566 DGLGWCTKSVNSSYG 522
           +GLGW T     ++G
Sbjct: 158 EGLGWRTNEARGAFG 172


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