BLASTX nr result

ID: Cimicifuga21_contig00021607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021607
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   159   5e-37
ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36
ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|2...   156   4e-36
ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like...   149   5e-34
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...   149   6e-34

>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  159 bits (402), Expect = 5e-37
 Identities = 72/93 (77%), Positives = 82/93 (88%), Gaps = 1/93 (1%)
 Frame = +1

Query: 223 EKGLDETTLQSYPILLYSEAKLHNKGTTSGC-SICLSDYKDTDSLRLLPDCGHLFHVNCL 399
           E G+DE TL++YP LLYS+AKLHN  TT+ C SICL+DYK TD LRLLPDCGHLFH+ C+
Sbjct: 76  EVGIDEATLKNYPKLLYSQAKLHNTDTTATCCSICLADYKSTDMLRLLPDCGHLFHLKCV 135

Query: 400 DPWLRLHTTCPVCRNTPIPTPLSTPLAEVVPLA 498
           DPWLRLH TCPVCRN+P+PTPLSTPLAEVVPLA
Sbjct: 136 DPWLRLHPTCPVCRNSPLPTPLSTPLAEVVPLA 168


>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  157 bits (396), Expect = 2e-36
 Identities = 72/93 (77%), Positives = 80/93 (86%), Gaps = 1/93 (1%)
 Frame = +1

Query: 223 EKGLDETTLQSYPILLYSEAKLHNKGTTSGC-SICLSDYKDTDSLRLLPDCGHLFHVNCL 399
           E GLDE TL+SYP LLYSEAKLH   +TS C SICL+DYK TD LRLLPDCGHLFH+ C+
Sbjct: 62  EIGLDEATLKSYPTLLYSEAKLHKTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCV 121

Query: 400 DPWLRLHTTCPVCRNTPIPTPLSTPLAEVVPLA 498
           DPWLRLH TCPVCR +P+PTPL+TPLAEVVPLA
Sbjct: 122 DPWLRLHPTCPVCRTSPLPTPLATPLAEVVPLA 154


>ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|222854305|gb|EEE91852.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  156 bits (394), Expect = 4e-36
 Identities = 70/91 (76%), Positives = 80/91 (87%), Gaps = 1/91 (1%)
 Frame = +1

Query: 229 GLDETTLQSYPILLYSEAKLHNKGTTSGC-SICLSDYKDTDSLRLLPDCGHLFHVNCLDP 405
           GLDE TL SYP LLYSEAKLH  G+T+ C SICL+DYK+TD LRLLPDCGHLFH+ C+DP
Sbjct: 56  GLDEATLNSYPTLLYSEAKLHKTGSTATCCSICLADYKNTDKLRLLPDCGHLFHLRCVDP 115

Query: 406 WLRLHTTCPVCRNTPIPTPLSTPLAEVVPLA 498
           WLRLH TCPVCR +P+P+PL+TPLAEVVPLA
Sbjct: 116 WLRLHPTCPVCRTSPLPSPLATPLAEVVPLA 146


>ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera]
          Length = 169

 Score =  149 bits (376), Expect = 5e-34
 Identities = 67/91 (73%), Positives = 79/91 (86%), Gaps = 1/91 (1%)
 Frame = +1

Query: 229 GLDETTLQSYPILLYSEAKLHNKGTTSGC-SICLSDYKDTDSLRLLPDCGHLFHVNCLDP 405
           GLDE T+ SYP ++YSEAKL +K +T+ C SICL+DYK +D LRLLPDCGHLFH+ C+DP
Sbjct: 75  GLDEATILSYPKMVYSEAKLQHKDSTAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDP 134

Query: 406 WLRLHTTCPVCRNTPIPTPLSTPLAEVVPLA 498
           WLRLH TCPVCR +P+PTPLSTPLAEVVPLA
Sbjct: 135 WLRLHPTCPVCRTSPMPTPLSTPLAEVVPLA 165


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score =  149 bits (375), Expect = 6e-34
 Identities = 69/91 (75%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
 Frame = +1

Query: 229 GLDETTLQSYPILLYSEAKLH-NKGTTSGCSICLSDYKDTDSLRLLPDCGHLFHVNCLDP 405
           GLD+ T+ SYP LLYSEAKL  N  T S CSICL+DYK++D LRLLPDCGHLFH+ C+DP
Sbjct: 78  GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDP 137

Query: 406 WLRLHTTCPVCRNTPIPTPLSTPLAEVVPLA 498
           WLRLH TCPVCR +PIPTPLSTPLAE VPLA
Sbjct: 138 WLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 168


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