BLASTX nr result

ID: Cimicifuga21_contig00021604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021604
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307264.1| predicted protein [Populus trichocarpa] gi|2...   151   1e-34
ref|XP_002310141.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|XP_002523579.1| conserved hypothetical protein [Ricinus comm...   144   3e-32
ref|XP_002282456.1| PREDICTED: uncharacterized protein LOC100250...   140   3e-31
ref|NP_001237862.1| uncharacterized protein LOC100527048 [Glycin...   135   1e-29

>ref|XP_002307264.1| predicted protein [Populus trichocarpa] gi|222856713|gb|EEE94260.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  151 bits (382), Expect = 1e-34
 Identities = 82/144 (56%), Positives = 95/144 (65%), Gaps = 9/144 (6%)
 Frame = -2

Query: 726 PPPLYKQRSLSSDTYRDEAWMXXXXXXXXXXXXSVTDDDLDELKACMELGFGFDSPDLDR 547
           P PLYKQ S S D YRDEAW+            SVTD+DLDELK C+ELGFGFDSP++D+
Sbjct: 34  PSPLYKQHSWSPDIYRDEAWLRRKGNYKKKKCKSVTDEDLDELKGCIELGFGFDSPEMDQ 93

Query: 546 KLSDTFPALELYHAVNKQY---------KNPLXXXXXXXXXXXSPVGSPNSIFDTGDKNP 394
           +LSDTFPALELY+AVNK Y          +             SP+GSP++IF  GD NP
Sbjct: 94  RLSDTFPALELYYAVNKNYHDHSVSKPFTDTSSSSMASDCDSLSPLGSPHNIFGPGD-NP 152

Query: 393 QLVKARLKQWAQLVACSVRHSSPS 322
           Q VK RLKQWAQ+VACSVR SS S
Sbjct: 153 QTVKTRLKQWAQVVACSVRQSSSS 176


>ref|XP_002310141.1| predicted protein [Populus trichocarpa] gi|222853044|gb|EEE90591.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  144 bits (364), Expect = 2e-32
 Identities = 80/145 (55%), Positives = 95/145 (65%), Gaps = 10/145 (6%)
 Frame = -2

Query: 726 PPPLYKQRSLSSDTYRDEAWMXXXXXXXXXXXXSVTDDDLDELKACMELGFGFDSPDLDR 547
           P PLYKQ S S D  RDEAW+            SVTD+DLDELK C+ELGFGFDSP++D+
Sbjct: 39  PSPLYKQHSWSPDIDRDEAWLRRKGSYKKKKSKSVTDEDLDELKGCIELGFGFDSPEMDQ 98

Query: 546 KLSDTFPALELYHAVNKQY-----KNPL-----XXXXXXXXXXXSPVGSPNSIFDTGDKN 397
           +LSDTFPALELY+AVNK Y       P+                SP+GSP++IF  G+ N
Sbjct: 99  RLSDTFPALELYYAVNKNYYDHSASKPVVTATPSSSTASDCDSPSPLGSPHTIFGPGE-N 157

Query: 396 PQLVKARLKQWAQLVACSVRHSSPS 322
           PQ VK RL+QWAQ+VACSVR SS S
Sbjct: 158 PQTVKTRLRQWAQVVACSVRQSSSS 182


>ref|XP_002523579.1| conserved hypothetical protein [Ricinus communis]
           gi|223537141|gb|EEF38774.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 300

 Score =  144 bits (362), Expect = 3e-32
 Identities = 79/142 (55%), Positives = 93/142 (65%), Gaps = 9/142 (6%)
 Frame = -2

Query: 720 PLYKQRSLSSDTYRDEAWMXXXXXXXXXXXXSVTDDDLDELKACMELGFGFDSPDLDRKL 541
           PLYKQ S S D YRDEAW+            SVTD+D+DELKAC+ELGFGFDSP++D++L
Sbjct: 158 PLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVDELKACIELGFGFDSPEMDQRL 217

Query: 540 SDTFPALELYHAVNKQY-----KNPL----XXXXXXXXXXXSPVGSPNSIFDTGDKNPQL 388
           SDT PAL LYHAVNK Y       P+               SP+GSP++IF  GD NPQ 
Sbjct: 218 SDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCDSPSPLGSPHAIFGPGD-NPQT 276

Query: 387 VKARLKQWAQLVACSVRHSSPS 322
           VK RL+QWAQ+VACSVR  S S
Sbjct: 277 VKTRLRQWAQVVACSVRQCSSS 298


>ref|XP_002282456.1| PREDICTED: uncharacterized protein LOC100250717 [Vitis vinifera]
          Length = 157

 Score =  140 bits (353), Expect = 3e-31
 Identities = 81/145 (55%), Positives = 93/145 (64%), Gaps = 12/145 (8%)
 Frame = -2

Query: 726 PPPLYKQRSLSSD---TYRDEAWMXXXXXXXXXXXXS---VTDDDLDELKACMELGFGFD 565
           P PLYKQRS S D   TYRDEAW                 VTD+DLDELKAC+ELGFGFD
Sbjct: 13  PAPLYKQRSWSPDSPDTYRDEAWQRRKGNNTRRSRRRSKSVTDEDLDELKACIELGFGFD 72

Query: 564 SPDLDRKLSDTFPALELYHAVNKQYKNPL------XXXXXXXXXXXSPVGSPNSIFDTGD 403
           SPD+D++LSDT PAL LY AVNKQY + +                 SP+GSP++IF  GD
Sbjct: 73  SPDMDQRLSDTLPALGLYKAVNKQYFDTVAKSLSPSSSTMSECDPPSPLGSPHTIFGPGD 132

Query: 402 KNPQLVKARLKQWAQLVACSVRHSS 328
            NPQ VK RL+ WAQ+VACSVR SS
Sbjct: 133 -NPQTVKTRLRHWAQVVACSVRQSS 156


>ref|NP_001237862.1| uncharacterized protein LOC100527048 [Glycine max]
           gi|255631440|gb|ACU16087.1| unknown [Glycine max]
          Length = 167

 Score =  135 bits (340), Expect = 1e-29
 Identities = 79/143 (55%), Positives = 94/143 (65%), Gaps = 12/143 (8%)
 Frame = -2

Query: 720 PLYKQRSLSSDTYRDEAWMXXXXXXXXXXXXSVTDDDLDELKACMELGFGFDSP---DLD 550
           PL+KQRS S D +RDEAW+            SVTD+D+DELKAC+ELGFGFDS    +LD
Sbjct: 24  PLFKQRSWSPDAFRDEAWLRRKGNCKNRRSKSVTDEDVDELKACIELGFGFDSSPENELD 83

Query: 549 RKLSDTFPALELYHAVNKQYKNPL--------XXXXXXXXXXXSPVGSPNS-IFDTGDKN 397
           ++LSDT PAL LY+AVNK+Y N L                   SP GSP+S IF TGD N
Sbjct: 84  QRLSDTLPALGLYYAVNKRYNNSLVTKTTPSSSSAASDCDSSPSPHGSPHSAIFTTGD-N 142

Query: 396 PQLVKARLKQWAQLVACSVRHSS 328
           PQ VK RL+QWAQ+VAC+VR SS
Sbjct: 143 PQTVKTRLRQWAQVVACAVRQSS 165


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