BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021599
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33798.3| unnamed protein product [Vitis vinifera]               51   8e-14
ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulat...    51   1e-12
ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulat...    51   1e-12
ref|NP_199375.2| 26S proteasome regulatory subunit N9 [Arabidops...    51   8e-12
ref|XP_002865235.1| hypothetical protein ARALYDRAFT_494422 [Arab...    51   8e-12

>emb|CBI33798.3| unnamed protein product [Vitis vinifera]
          Length = 181

 Score = 50.8 bits (120), Expect(2) = 8e-14
 Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
 Frame = +1

Query: 178 CF*NLQIKSLYGTKV----YFVQPFNADSLVCYWELFEIYRAALISQLALVENEK 330
           CF  + IKSL GTKV    Y +Q FN+  LV Y EL  ++ AAL +Q ALV+NEK
Sbjct: 16  CFHEVGIKSLLGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALSAQPALVQNEK 70



 Score = 50.8 bits (120), Expect(2) = 8e-14
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +2

Query: 326 RRELERINTLRLIEINLSRPSEDRTFLLDAIAEWTKLCIEDVGGYLVK 469
           ++ LE+IN L L+EI  SRPSEDRT  L+ IAE TKL +EDV   L+K
Sbjct: 70  KKLLEKINILCLMEIIFSRPSEDRTIPLNIIAERTKLSVEDVEYLLMK 117


>ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
           isoform 2 [Vitis vinifera]
          Length = 400

 Score = 50.8 bits (120), Expect(2) = 1e-12
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +2

Query: 326 RRELERINTLRLIEINLSRPSEDRTFLLDAIAEWTKLCIEDVGGYLVK 469
           ++ LE+IN L L+EI  SRPSEDRT  L+ IAE TKL +EDV   L+K
Sbjct: 275 KKLLEKINILCLMEIIFSRPSEDRTIPLNIIAERTKLSVEDVEYLLMK 322



 Score = 47.0 bits (110), Expect(2) = 1e-12
 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
 Frame = +1

Query: 196 IKSLYGTKV----YFVQPFNADSLVCYWELFEIYRAALISQLALVENEK 330
           IKSL GTKV    Y +Q FN+  LV Y EL  ++ AAL +Q ALV+NEK
Sbjct: 227 IKSLLGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALSAQPALVQNEK 275


>ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
           isoform 1 [Vitis vinifera]
          Length = 386

 Score = 50.8 bits (120), Expect(2) = 1e-12
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +2

Query: 326 RRELERINTLRLIEINLSRPSEDRTFLLDAIAEWTKLCIEDVGGYLVK 469
           ++ LE+IN L L+EI  SRPSEDRT  L+ IAE TKL +EDV   L+K
Sbjct: 275 KKLLEKINILCLMEIIFSRPSEDRTIPLNIIAERTKLSVEDVEYLLMK 322



 Score = 47.0 bits (110), Expect(2) = 1e-12
 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
 Frame = +1

Query: 196 IKSLYGTKV----YFVQPFNADSLVCYWELFEIYRAALISQLALVENEK 330
           IKSL GTKV    Y +Q FN+  LV Y EL  ++ AAL +Q ALV+NEK
Sbjct: 227 IKSLLGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALSAQPALVQNEK 275


>ref|NP_199375.2| 26S proteasome regulatory subunit N9 [Arabidopsis thaliana]
           gi|20260474|gb|AAM13135.1| 26S proteasome subunit-like
           protein [Arabidopsis thaliana]
           gi|28059321|gb|AAO30047.1| 26S proteasome subunit-like
           protein [Arabidopsis thaliana]
           gi|32700036|gb|AAP86668.1| 26S proteasome subunit RPN9a
           [Arabidopsis thaliana] gi|332007894|gb|AED95277.1| 26S
           proteasome regulatory subunit N9 [Arabidopsis thaliana]
          Length = 386

 Score = 51.2 bits (121), Expect(2) = 8e-12
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = +2

Query: 326 RRELERINTLRLIEINLSRPSEDRTFLLDAIAEWTKLCIEDVGGYLVK 469
           ++ LE+IN L LIEI  SRP+EDRT  L  IAE TKL IEDV   L+K
Sbjct: 275 KKLLEKINILCLIEIIFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMK 322



 Score = 43.5 bits (101), Expect(2) = 8e-12
 Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
 Frame = +1

Query: 196 IKSLYGTKV----YFVQPFNADSLVCYWELFEIYRAALISQLALVENEK 330
           +KSL GT V    + +Q FN   LV Y EL  ++ A+LI+Q ALVENEK
Sbjct: 227 LKSLLGTNVEWLYHILQAFNHGDLVQYQELCRVHNASLIAQPALVENEK 275


>ref|XP_002865235.1| hypothetical protein ARALYDRAFT_494422 [Arabidopsis lyrata subsp.
           lyrata] gi|297311070|gb|EFH41494.1| hypothetical protein
           ARALYDRAFT_494422 [Arabidopsis lyrata subsp. lyrata]
          Length = 386

 Score = 51.2 bits (121), Expect(2) = 8e-12
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = +2

Query: 326 RRELERINTLRLIEINLSRPSEDRTFLLDAIAEWTKLCIEDVGGYLVK 469
           ++ LE+IN L LIEI  SRP+EDRT  L  IAE TKL IEDV   L+K
Sbjct: 275 KKLLEKINILCLIEIIFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMK 322



 Score = 43.5 bits (101), Expect(2) = 8e-12
 Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
 Frame = +1

Query: 196 IKSLYGTKV----YFVQPFNADSLVCYWELFEIYRAALISQLALVENEK 330
           +KSL GT V    + +Q FN   LV Y EL  ++ A+LI+Q ALVENEK
Sbjct: 227 LKSLLGTNVEWLYHILQAFNHGDLVQYQELCRVHNASLIAQPALVENEK 275