BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021571
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333684.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002530005.1| pentatricopeptide repeat-containing protein,...    77   2e-12
ref|XP_003601393.1| Pentatricopeptide repeat-containing protein ...    69   3e-10
ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_002323875.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_002333684.1| predicted protein [Populus trichocarpa] gi|222838021|gb|EEE76386.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/80 (51%), Positives = 54/80 (67%)
 Frame = -3

Query: 240 MQEPSIQQWEPNPSLAASLISLAKTCQSMRDLKRIQGRAIRTCXXXXXXXLAKMLRFAAV 61
           M  P+ QQ +P  +LA++LIS+A+ C SM  LK+I   ++          LAKMLRFAAV
Sbjct: 1   MHPPNNQQCKPILTLASTLISMAEACNSMSRLKQIHAHSLLAGLHDHSIILAKMLRFAAV 60

Query: 60  SPSGNLLFAHRLFDQMPQPN 1
           SPSG+L +A RLFDQ+P PN
Sbjct: 61  SPSGDLAYAQRLFDQLPHPN 80


>ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530484|gb|EEF32367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 499

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/80 (53%), Positives = 53/80 (66%)
 Frame = -3

Query: 240 MQEPSIQQWEPNPSLAASLISLAKTCQSMRDLKRIQGRAIRTCXXXXXXXLAKMLRFAAV 61
           MQ    QQ +P  +LA+ L S+A+ CQSM  LK+I   ++ T        L KMLRFAAV
Sbjct: 1   MQLSVQQQCKPILALASILASIAENCQSMNHLKQIHAHSLLTDLHNHSVILGKMLRFAAV 60

Query: 60  SPSGNLLFAHRLFDQMPQPN 1
           SPSG+L +A RLFDQMPQPN
Sbjct: 61  SPSGDLPYAQRLFDQMPQPN 80


>ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|358344321|ref|XP_003636238.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355490441|gb|AES71644.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502173|gb|AES83376.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 486

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/66 (50%), Positives = 45/66 (68%)
 Frame = -3

Query: 201 SLAASLISLAKTCQSMRDLKRIQGRAIRTCXXXXXXXLAKMLRFAAVSPSGNLLFAHRLF 22
           ++A++L+ +A+ C SMR+ K I   A RTC       L K+ RFAAVSP G+L +AH +F
Sbjct: 5   NVASALVYMAEKCISMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMF 64

Query: 21  DQMPQP 4
           DQMPQP
Sbjct: 65  DQMPQP 70


>ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 488

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/66 (48%), Positives = 42/66 (63%)
 Frame = -3

Query: 201 SLAASLISLAKTCQSMRDLKRIQGRAIRTCXXXXXXXLAKMLRFAAVSPSGNLLFAHRLF 22
           ++A +L  +A+ C  MRDLK +   A RT        L K+ RFAAVSP G+L +AHR+F
Sbjct: 5   TVAFTLAHMAERCTCMRDLKLLHAHAFRTRLHDHTVVLGKLFRFAAVSPLGDLRYAHRMF 64

Query: 21  DQMPQP 4
           DQMP P
Sbjct: 65  DQMPHP 70


>ref|XP_002323875.1| predicted protein [Populus trichocarpa] gi|222866877|gb|EEF04008.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/59 (52%), Positives = 39/59 (66%)
 Frame = -3

Query: 177 LAKTCQSMRDLKRIQGRAIRTCXXXXXXXLAKMLRFAAVSPSGNLLFAHRLFDQMPQPN 1
           +A+ C SM  LK+I   ++          LAKMLRFAAVSPSG+L +A RLFDQ+P PN
Sbjct: 1   MAEACNSMSRLKQIHAHSLLAGLHDHSIILAKMLRFAAVSPSGDLAYAQRLFDQLPHPN 59