BLASTX nr result

ID: Cimicifuga21_contig00021558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021558
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530555.1| conserved hypothetical protein [Ricinus comm...   144   2e-32
ref|XP_002263732.1| PREDICTED: uncharacterized protein LOC100249...   141   1e-31
ref|XP_002263161.1| PREDICTED: uncharacterized protein LOC100244...   132   5e-29
ref|XP_002318799.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-26
ref|XP_003553153.1| PREDICTED: protein NDR1-like [Glycine max]        124   2e-26

>ref|XP_002530555.1| conserved hypothetical protein [Ricinus communis]
           gi|223529893|gb|EEF31823.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 253

 Score =  144 bits (362), Expect = 2e-32
 Identities = 70/125 (56%), Positives = 89/125 (71%), Gaps = 5/125 (4%)
 Frame = +3

Query: 345 MADQQKIHPV--DVEAP--PTAPLMPNDATKSEKGDPA-EQFPPIRRTIPVKHSKPPKRR 509
           MADQQ+IHPV  DVEAP  PT PLMP +++KS++GDPA +Q+PP +RT PVKHSKPPK+R
Sbjct: 1   MADQQRIHPVTHDVEAPQTPTVPLMPRNSSKSDQGDPAAQQYPPFQRTFPVKHSKPPKKR 60

Query: 510 SCCCRFFCWTVSXXXXXXXXXXXXXXXXYLVFQPKLPKYSVDRLRISDFRLNPDESLYAR 689
           SCCC+  CWT+S                YLVF+PKLP +S+DRL+I+ F L+ D SL A 
Sbjct: 61  SCCCKCLCWTLSLLLILIVVIGIIIGILYLVFRPKLPDFSIDRLQITQFNLSSDSSLSAA 120

Query: 690 FTVAV 704
           F V +
Sbjct: 121 FDVTI 125


>ref|XP_002263732.1| PREDICTED: uncharacterized protein LOC100249528 [Vitis vinifera]
           gi|297737207|emb|CBI26408.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  141 bits (356), Expect = 1e-31
 Identities = 72/123 (58%), Positives = 86/123 (69%), Gaps = 3/123 (2%)
 Frame = +3

Query: 345 MADQQKIHPV-DVEAPPTAPLMPNDATKSEKGDPAEQ--FPPIRRTIPVKHSKPPKRRSC 515
           MAD QKIHPV D EAPPT PL+P  + +SEKGDP +    PP++RTIPV HSKPPKR SC
Sbjct: 1   MADHQKIHPVVDPEAPPTEPLVPRGSFRSEKGDPFQHPPDPPLQRTIPVIHSKPPKR-SC 59

Query: 516 CCRFFCWTVSXXXXXXXXXXXXXXXXYLVFQPKLPKYSVDRLRISDFRLNPDESLYARFT 695
           CC+  CWT+S                YLVFQPKLPKYSVD LRI+DF+LN D +LYA+F 
Sbjct: 60  CCKCMCWTISLLVLLLVIVGAIAGVLYLVFQPKLPKYSVDSLRITDFQLNYDMTLYAKFD 119

Query: 696 VAV 704
           + +
Sbjct: 120 MKI 122


>ref|XP_002263161.1| PREDICTED: uncharacterized protein LOC100244374 [Vitis vinifera]
           gi|296083806|emb|CBI24023.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  132 bits (333), Expect = 5e-29
 Identities = 67/124 (54%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
 Frame = +3

Query: 345 MADQQKIHPV-DVEAP--PTAPLMPNDATKSEKGDPAEQFPPIRRTIPVKHSKPP-KRRS 512
           MAD Q+IHP  D EAP  PTAPL+P  A+KS++ DP EQ+PP +RTIPV HSKPP K+RS
Sbjct: 1   MADPQRIHPAQDPEAPHTPTAPLVPRGASKSDRSDPTEQYPPFQRTIPVMHSKPPKKKRS 60

Query: 513 CCCRFFCWTVSXXXXXXXXXXXXXXXXYLVFQPKLPKYSVDRLRISDFRLNPDESLYARF 692
           C C+ FCWT+S                +LVF+PKLPKYS+D LRI+   L  D+SL A F
Sbjct: 61  CLCKCFCWTISLLLLLIVIIAIVVAILFLVFKPKLPKYSIDGLRITQLSLGSDDSLSATF 120

Query: 693 TVAV 704
            V +
Sbjct: 121 DVNI 124


>ref|XP_002318799.1| predicted protein [Populus trichocarpa] gi|222859472|gb|EEE97019.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  124 bits (311), Expect = 2e-26
 Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 19/139 (13%)
 Frame = +3

Query: 345 MADQQKIHPV-----------DVEAP--PTAPLMPNDATKSEKGDPA-----EQFPPIRR 470
           MAD QK++P+           DVEAP  P  PL+P  ++KS++GDPA       +PP +R
Sbjct: 1   MADHQKVYPLNTSSTHDDQPLDVEAPQTPRVPLVPRGSSKSDQGDPAAHIHGHHYPPFQR 60

Query: 471 TIPVKHSKPPK-RRSCCCRFFCWTVSXXXXXXXXXXXXXXXXYLVFQPKLPKYSVDRLRI 647
           TIPV H+KPPK RRSCCCRF CWT+S                YLVFQPKLPK+S+D L+I
Sbjct: 61  TIPVTHTKPPKKRRSCCCRFLCWTLSLLLLLILVIGAVAGILYLVFQPKLPKFSIDTLQI 120

Query: 648 SDFRLNPDESLYARFTVAV 704
           + F L  + SL A F V +
Sbjct: 121 TRFNLTNNSSLSATFNVTI 139


>ref|XP_003553153.1| PREDICTED: protein NDR1-like [Glycine max]
          Length = 244

 Score =  124 bits (310), Expect = 2e-26
 Identities = 67/121 (55%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
 Frame = +3

Query: 348 ADQQKIHPV-DVEAPPTAPLMPNDATKSEKGDPAEQFPPIRRTIPVKHSKPPKRR-SCCC 521
           ADQQ+IHPV DVEAP   PL+P +  KS+KG P       +RT PV HSKPPKRR SCCC
Sbjct: 4   ADQQRIHPVHDVEAPHR-PLVPENYAKSDKGIP-------QRTFPVMHSKPPKRRRSCCC 55

Query: 522 RFFCWTVSXXXXXXXXXXXXXXXXYLVFQPKLPKYSVDRLRISDFRLNPDESLYARFTVA 701
           RF CWT+S                YLVF+PKLPKYSVD+LRIS F ++ + +LYA F VA
Sbjct: 56  RFMCWTLSILLILIIAIAITIGILYLVFRPKLPKYSVDQLRISQFNVSDNNTLYATFNVA 115

Query: 702 V 704
           +
Sbjct: 116 I 116


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