BLASTX nr result

ID: Cimicifuga21_contig00021551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021551
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162669.1| PREDICTED: LOW QUALITY PROTEIN: elongation f...    63   3e-08
ref|XP_004147612.1| PREDICTED: elongation factor G, chloroplasti...    63   3e-08
ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana] g...    62   6e-08
ref|XP_002886457.1| ATSCO1/ATSCO1/CPEF-G [Arabidopsis lyrata sub...    62   6e-08
gb|AAK64040.1| unknown protein [Arabidopsis thaliana]                  62   6e-08

>ref|XP_004162669.1| PREDICTED: LOW QUALITY PROTEIN: elongation factor G,
           chloroplastic-like [Cucumis sativus]
          Length = 777

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +2

Query: 2   LVNVRAVC--GTHHDVDSRVLPYQLAA**FIR*EMEKAGPRIVESIMRVKVATPEENLRE 175
           +V+VRAV   GT+HDVDS VL +QLAA    R  M KAGPR++E IM+V+V TPEE+L +
Sbjct: 640 VVDVRAVLVDGTYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMKVEVVTPEEHLGD 699

Query: 176 L 178
           +
Sbjct: 700 V 700


>ref|XP_004147612.1| PREDICTED: elongation factor G, chloroplastic-like [Cucumis
           sativus]
          Length = 777

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +2

Query: 2   LVNVRAVC--GTHHDVDSRVLPYQLAA**FIR*EMEKAGPRIVESIMRVKVATPEENLRE 175
           +V+VRAV   GT+HDVDS VL +QLAA    R  M KAGPR++E IM+V+V TPEE+L +
Sbjct: 640 VVDVRAVLVDGTYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMKVEVVTPEEHLGD 699

Query: 176 L 178
           +
Sbjct: 700 V 700


>ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana]
           gi|6630460|gb|AAF19548.1|AC007190_16 F23N19.11
           [Arabidopsis thaliana] gi|23297147|gb|AAN13104.1|
           unknown protein [Arabidopsis thaliana]
           gi|90855593|tpg|DAA05753.1| TPA_exp: elongation factor G
           [Arabidopsis thaliana] gi|332195879|gb|AEE34000.1|
           elongation factor EF-G [Arabidopsis thaliana]
          Length = 783

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +2

Query: 2   LVNVRA--VCGTHHDVDSRVLPYQLAA**FIR*EMEKAGPRIVESIMRVKVATPEENLRE 175
           +V+VRA  V G++HDVDS VL +QLAA    R  M KAGPR++E IMRV+V TPEE+L +
Sbjct: 646 VVDVRACLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMRVEVVTPEEHLGD 705

Query: 176 L 178
           +
Sbjct: 706 V 706


>ref|XP_002886457.1| ATSCO1/ATSCO1/CPEF-G [Arabidopsis lyrata subsp. lyrata]
           gi|297332298|gb|EFH62716.1| ATSCO1/ATSCO1/CPEF-G
           [Arabidopsis lyrata subsp. lyrata]
          Length = 782

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +2

Query: 2   LVNVRA--VCGTHHDVDSRVLPYQLAA**FIR*EMEKAGPRIVESIMRVKVATPEENLRE 175
           +V+VRA  V G++HDVDS VL +QLAA    R  M KAGPR++E IMRV+V TPEE+L +
Sbjct: 645 VVDVRACLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMRVEVVTPEEHLGD 704

Query: 176 L 178
           +
Sbjct: 705 V 705


>gb|AAK64040.1| unknown protein [Arabidopsis thaliana]
          Length = 783

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +2

Query: 2   LVNVRA--VCGTHHDVDSRVLPYQLAA**FIR*EMEKAGPRIVESIMRVKVATPEENLRE 175
           +V+VRA  V G++HDVDS VL +QLAA    R  M KAGPR++E IMRV+V TPEE+L +
Sbjct: 646 VVDVRACLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMRVEVVTPEEHLGD 705

Query: 176 L 178
           +
Sbjct: 706 V 706


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