BLASTX nr result

ID: Cimicifuga21_contig00021547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021547
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535140.1| conserved hypothetical protein [Ricinus comm...   107   7e-21
emb|CBI31105.3| unnamed protein product [Vitis vinifera]               71   2e-16
gb|AFW87085.1| hypothetical protein ZEAMMB73_565759 [Zea mays]         62   2e-08
gb|ABA97927.1| hypothetical protein LOC_Os12g23620 [Oryza sativa...    46   2e-07

>ref|XP_002535140.1| conserved hypothetical protein [Ricinus communis]
           gi|223523945|gb|EEF27246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 114

 Score =  107 bits (266), Expect = 7e-21
 Identities = 67/141 (47%), Positives = 72/141 (51%)
 Frame = +3

Query: 366 MSSPGWSTVRQNRHRLGAIDGTW*AHLSPYGSAAGT*RCG*RKPQKATSCRSRDLHRXXX 545
           MSSPGWSTVRQNRHRLGAIDGTW  H+  +   A        + +        +L     
Sbjct: 1   MSSPGWSTVRQNRHRLGAIDGTW--HIEMWVEEASK-----SEGRAVGHVICTELVADWA 53

Query: 546 XXXXXXDQSRSARPIGRSNRAGPCPGTSNEIGGRVLFLQPF*YDRPGPLPPIPYV*ERDP 725
                 DQ        RSNRAGPC  TSNEIGGR                       RD 
Sbjct: 54  FSWIKADQLAFLLSKSRSNRAGPCLRTSNEIGGR----------------------GRDS 91

Query: 726 PKNDQSCGGTEGTDSANVPRP 788
           PKNDQSCGGTEGTDSANVPRP
Sbjct: 92  PKNDQSCGGTEGTDSANVPRP 112


>emb|CBI31105.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score = 70.9 bits (172), Expect(2) = 2e-16
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = +2

Query: 689 PSPYPLCLGAGSTQERPVLWWYGRHGLRER 778
           PSPYPLCLGAGS QERPVLWWYGRHGLRER
Sbjct: 186 PSPYPLCLGAGSAQERPVLWWYGRHGLRER 215



 Score = 42.0 bits (97), Expect(2) = 2e-16
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +1

Query: 520 HVTCTDKVADWAFFLIKADQLAPLVGR 600
           HVTCT+ VADWAF LIKAD LA L+ +
Sbjct: 152 HVTCTELVADWAFSLIKADPLAFLLSK 178


>gb|AFW87085.1| hypothetical protein ZEAMMB73_565759 [Zea mays]
          Length = 60

 Score = 62.4 bits (150), Expect(2) = 2e-08
 Identities = 33/54 (61%), Positives = 37/54 (68%)
 Frame = +3

Query: 741 SCGGTEGTDSANVPRPQRKKASTRTTFLLRADVAKCLTLLVIVPCCCGRCSFAR 902
           +CGGT   DSA+VP P RKK        ++   A CLTLLVIVPCCCGRCSFAR
Sbjct: 11  TCGGT---DSASVPHPLRKKLLNHHK--IKKYDALCLTLLVIVPCCCGRCSFAR 59



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 706 MFRSGIHPRTT 738
           MFRSGI PRTT
Sbjct: 1   MFRSGICPRTT 11


>gb|ABA97927.1| hypothetical protein LOC_Os12g23620 [Oryza sativa Japonica Group]
          Length = 111

 Score = 45.8 bits (107), Expect(2) = 2e-07
 Identities = 28/49 (57%), Positives = 31/49 (63%)
 Frame = +2

Query: 779 PAPSEKESLNQNHIPFACGCS*VSDSIGHSSLLLRPVLVCARVNQPNKQ 925
           P P  K+ LN   I        VSDSIGHSSLLLRPVLVCARV   +K+
Sbjct: 58  PHPLRKKLLNHYKIKKYDA---VSDSIGHSSLLLRPVLVCARVTAIHKR 103



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +3

Query: 741 SCGGTEGTDSANVPRPQRKK 800
           +CGG EGTDSA+VP P RKK
Sbjct: 45  TCGGMEGTDSASVPHPLRKK 64


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