BLASTX nr result

ID: Cimicifuga21_contig00021535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021535
         (1505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vi...   283   1e-73
emb|CBI29830.3| unnamed protein product [Vitis vinifera]              283   1e-73
ref|XP_002529505.1| conserved hypothetical protein [Ricinus comm...   266   1e-68
ref|XP_003518134.1| PREDICTED: uncharacterized protein LOC100795...   248   3e-63
ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis ...   236   1e-59

>ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1128

 Score =  283 bits (723), Expect = 1e-73
 Identities = 154/295 (52%), Positives = 192/295 (65%), Gaps = 8/295 (2%)
 Frame = +2

Query: 2    HTSFYSYRFDEMVDLLLGVKSPADVLTLSSRFSCFQNLLVYMLKSDLEDRNAKAFLILNE 181
            H  F S +F E+V+LLLG+KS  D+  L SRF+CF  LLV+ LK  LE+ N KAFLILNE
Sbjct: 770  HAWFCSSQFIELVELLLGLKSTDDITLLKSRFACFHILLVHALKMSLEEENTKAFLILNE 829

Query: 182  IILALKDCNEEPRKAAYDVLLKIXXXXXXXXXXXXXXPHQQLFNMIMGYLSGSPPPIMXX 361
            IIL LK+  EE RK AYD+LL I               HQ+L +MIMGYLSGS P I   
Sbjct: 830  IILTLKNSKEEVRKVAYDILLVISSSLENSSSLSSEGSHQKLISMIMGYLSGSSPHIKSG 889

Query: 362  XXXXXXXXXYKNSGFCLSVPELVPSVLGLLQSKAKEVIKAVLGFVKVLVSCIQTRDLQKL 541
                     YK++  C SVP+LVPSVL LLQ KA EV+KAVLGFVKV+VSC+Q RDLQ  
Sbjct: 890  AVSVLSVLVYKDANICTSVPDLVPSVLALLQGKAVEVVKAVLGFVKVVVSCLQARDLQSF 949

Query: 542  LPDIVSGILPWSSVSKNHFRSKVATIFEIIIRKCGYVSVELLVPGRYRGFIKNVKEQRH- 718
            L D+++G+LPWSSVS+NHFRSKV  I EI++RKCG  +V+LL P +Y+GF+K V E RH 
Sbjct: 950  LTDVLNGVLPWSSVSRNHFRSKVTVILEIVVRKCGSAAVKLLTPEKYKGFVKTVLENRHN 1009

Query: 719  GKTSSKEAE-------APDTVAKSADTFSNRENKRKHRVTTQGGGFDSRTNKKRK 862
             K SSKEA+        P+  ++ +D  S R+ KR H+      GF  R  K+ K
Sbjct: 1010 SKGSSKEADDPEKEEKRPNASSRGSDFTSLRQQKRGHKEL----GFSPRKRKREK 1060


>emb|CBI29830.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  283 bits (723), Expect = 1e-73
 Identities = 154/295 (52%), Positives = 192/295 (65%), Gaps = 8/295 (2%)
 Frame = +2

Query: 2    HTSFYSYRFDEMVDLLLGVKSPADVLTLSSRFSCFQNLLVYMLKSDLEDRNAKAFLILNE 181
            H  F S +F E+V+LLLG+KS  D+  L SRF+CF  LLV+ LK  LE+ N KAFLILNE
Sbjct: 754  HAWFCSSQFIELVELLLGLKSTDDITLLKSRFACFHILLVHALKMSLEEENTKAFLILNE 813

Query: 182  IILALKDCNEEPRKAAYDVLLKIXXXXXXXXXXXXXXPHQQLFNMIMGYLSGSPPPIMXX 361
            IIL LK+  EE RK AYD+LL I               HQ+L +MIMGYLSGS P I   
Sbjct: 814  IILTLKNSKEEVRKVAYDILLVISSSLENSSSLSSEGSHQKLISMIMGYLSGSSPHIKSG 873

Query: 362  XXXXXXXXXYKNSGFCLSVPELVPSVLGLLQSKAKEVIKAVLGFVKVLVSCIQTRDLQKL 541
                     YK++  C SVP+LVPSVL LLQ KA EV+KAVLGFVKV+VSC+Q RDLQ  
Sbjct: 874  AVSVLSVLVYKDANICTSVPDLVPSVLALLQGKAVEVVKAVLGFVKVVVSCLQARDLQSF 933

Query: 542  LPDIVSGILPWSSVSKNHFRSKVATIFEIIIRKCGYVSVELLVPGRYRGFIKNVKEQRH- 718
            L D+++G+LPWSSVS+NHFRSKV  I EI++RKCG  +V+LL P +Y+GF+K V E RH 
Sbjct: 934  LTDVLNGVLPWSSVSRNHFRSKVTVILEIVVRKCGSAAVKLLTPEKYKGFVKTVLENRHN 993

Query: 719  GKTSSKEAE-------APDTVAKSADTFSNRENKRKHRVTTQGGGFDSRTNKKRK 862
             K SSKEA+        P+  ++ +D  S R+ KR H+      GF  R  K+ K
Sbjct: 994  SKGSSKEADDPEKEEKRPNASSRGSDFTSLRQQKRGHKEL----GFSPRKRKREK 1044


>ref|XP_002529505.1| conserved hypothetical protein [Ricinus communis]
            gi|223531021|gb|EEF32874.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1167

 Score =  266 bits (679), Expect = 1e-68
 Identities = 158/377 (41%), Positives = 216/377 (57%), Gaps = 29/377 (7%)
 Frame = +2

Query: 2    HTSFYSYRFDEMVDLLLGVKSPADVLTLSSRFSCFQNLLVYMLKSDLEDRNAKAFLILNE 181
            H  F S RF E+++LL+G+K P DV +L +RF+CFQ L++++L++ LE+ + KAFL+LNE
Sbjct: 786  HAWFCSARFAELIELLIGLKPPTDVASLKNRFACFQILMIHILEACLEEEDTKAFLMLNE 845

Query: 182  IILALKDCNEEPRKAAYDVLLKIXXXXXXXXXXXXXXPHQQLFNMIMGYLSGSPPPIMXX 361
            IIL LK  ++E RK AYD LL I               + +L +MIMGYLSG  P I   
Sbjct: 846  IILTLKGADDEARKVAYDTLLMISSSFRNLSSASSGETYHKLISMIMGYLSGPSPRIKSG 905

Query: 362  XXXXXXXXXYKNSGFCLSVPELVPSVLGLLQSKAKEVIKAVLGFVKVLVSCIQTRDLQKL 541
                     Y ++  CL +PELVPS+L LLQSKA EVIKAVLGFVKVLVS +Q +DLQ L
Sbjct: 906  AVSALSLLVYNDADICLKMPELVPSLLSLLQSKAVEVIKAVLGFVKVLVSSLQAKDLQNL 965

Query: 542  LPDIVSGILPWSSVSKNHFRSKVATIFEIIIRKCGYVSVELLVPGRYRGFIKNVKEQRHG 721
            L DI S IL WS+VS+ HFRSKV  I EI+ RKCG  +VEL+ P +Y+ F+K V + RH 
Sbjct: 966  LSDITSNILLWSTVSRFHFRSKVTVILEIMRRKCGSAAVELVTPEKYKSFVKTVLQNRHH 1025

Query: 722  KTSSKEAEAPDTVAKSADTFSNRENKRKHR----VTTQGGGFDSRTNKKR----KFSMPR 877
             T+SKE  +     K A + S R +KRKH+    V+ + G    R NK+      F+ P 
Sbjct: 1026 NTTSKEG-STGMETKLAYSSSKRIDKRKHKELGFVSEEKGRKRKRNNKENGNPPTFAEPG 1084

Query: 878  TNEPNRRQPQTTSRKDWN---------------------KRPSTGGKDSTRQRREMKPSK 994
             +  +   P+  ++++W+                     K+P++GGK    +    K   
Sbjct: 1085 VSSGDGGGPE-GAKREWHSKYGKPVKGRSTDNGKKRKFIKQPASGGKKGVERTIMGKKGG 1143

Query: 995  PAFHKAGPKAKFHKRRK 1045
              FHK     KF K  K
Sbjct: 1144 TVFHKPASTPKFPKHNK 1160


>ref|XP_003518134.1| PREDICTED: uncharacterized protein LOC100795433 [Glycine max]
          Length = 1156

 Score =  248 bits (633), Expect = 3e-63
 Identities = 150/374 (40%), Positives = 210/374 (56%), Gaps = 31/374 (8%)
 Frame = +2

Query: 17   SYRFDEMVDLLLGVKSPADVLTLSSRFSCFQNLLVYMLKSDLEDR-NAKAFLILNEIILA 193
            S R+ E++DLL G+K P  + +L SR++CF  L+V+ +K  LE+  N+KAFLILNEIIL 
Sbjct: 780  SARYIELIDLLHGLKPPTSIASLRSRYACFHMLMVHAVKVSLEEEENSKAFLILNEIILT 839

Query: 194  LKDCNEEPRKAAYDVLLKIXXXXXXXXXXXXXXPHQQLFNMIMGYLSGSPPPIMXXXXXX 373
            LKD  +E RK AYD LL I              P+ +L +MIMGYLSGS P I       
Sbjct: 840  LKDGKDETRKEAYDYLLNISSTLRDSSFIGSIEPYHKLVSMIMGYLSGSSPHIKSGAVSA 899

Query: 374  XXXXXYKNSGFCLSVPELVPSVLGLLQSKAKEVIKAVLGFVKVLVSCIQTRDLQKLLPDI 553
                 YK++   +SV +LVPS+L LLQ+K  E+IKAVLGFVKV+VS ++ R+LQ +L ++
Sbjct: 900  LSVLLYKDTNLPISVSDLVPSLLSLLQTKDVEIIKAVLGFVKVMVSSLEARELQNILSEV 959

Query: 554  VSGILPWSSVSKNHFRSKVATIFEIIIRKCGYVSVELLVPGRYRGFIKNVKEQRHGKTSS 733
            ++ ILPWSSVS+NHF+SKV  IFEI++RKCG  +V+L+ P +Y+ F+K V E RHGK+S 
Sbjct: 960  ITEILPWSSVSRNHFKSKVTVIFEILLRKCGSAAVKLVTPEKYKVFLKTVLENRHGKSS- 1018

Query: 734  KEAEAPDTVAKSADTFSNR------------------ENKRKH------RVTTQGGGFDS 841
             EA   DT     D+ + R                  +NKRK        +  Q G   S
Sbjct: 1019 -EAVTNDTKNMPEDSSAKRPERRKPENSDNLEKNSLKDNKRKRDKKFETDMPGQKGSLMS 1077

Query: 842  RTN------KKRKFSMPRTNEPNRRQPQTTSRKDWNKRPSTGGKDSTRQRREMKPSKPAF 1003
             +N      K+ ++S  +     R +     +K WNK  + GG     +       K A 
Sbjct: 1078 TSNDGLRLPKRSRYSNDKNPNVGRPEESEKGKKSWNKSFTGGGGKRKVKVTSTGKDKAAS 1137

Query: 1004 HKAGPKAKFHKRRK 1045
            H     +K HK ++
Sbjct: 1138 HVPIQPSKSHKLQR 1151


>ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis sativus]
          Length = 1149

 Score =  236 bits (602), Expect = 1e-59
 Identities = 143/349 (40%), Positives = 201/349 (57%), Gaps = 3/349 (0%)
 Frame = +2

Query: 2    HTSFYSYRFDEMVDLLLGVKSPADVLTLSSRFSCFQNLLVYMLKSDLEDRNAKAFLILNE 181
            H  F S RF E+VD+L+ ++SP D  +  SRF CF  LLV+ LK    + + KAFL+LNE
Sbjct: 771  HAWFASSRFPELVDMLIDLQSPVDTSSQRSRFGCFHILLVHSLKVSSAEESNKAFLMLNE 830

Query: 182  IILALKDCNEEPRKAAYDVLLKIXXXXXXXXXXXXXXPHQQLFNMIMGYLSGSPPPIMXX 361
            II+ LK   E+ RKAAYD+L  I               H++   MIMGYLSG+ P +   
Sbjct: 831  IIITLKSAEEDSRKAAYDILHCISCSLKDLSHTNSDA-HKKFVAMIMGYLSGASPHVKSG 889

Query: 362  XXXXXXXXXYKNSGFCLSVPELVPSVLGLLQSKAKEVIKAVLGFVKVLVSCIQTRDLQKL 541
                     Y+++  CLS+P+LVPS+L LL+ KA EVIKAVLGFVKVLVS +Q + LQ +
Sbjct: 890  AISAVSVLIYEDADICLSIPDLVPSILSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSI 949

Query: 542  LPDIVSGILPWSSVSKNHFRSKVATIFEIIIRKCGYVSVELLVPGRYRGFIKNVKEQRHG 721
            + DI++  LPWSSVS++HFRSKV  I EI+IRKCGY ++E   P  Y+GFIK   E+R  
Sbjct: 950  ISDILTAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGFTPENYKGFIKPFGEKRLN 1009

Query: 722  KTSSKEAEAPDTVAKSADTFSNRENKRKHRVTTQGGGFDSRTNKKRKFSMPR---TNEPN 892
            KTSSK+    +T      T   R+ K++  + +     +S  ++KRK+  P     ++ +
Sbjct: 1010 KTSSKDVGDANTDVADLSTNGVRD-KQQDGLDSLPKKNESGHHRKRKWEKPSGFIRSKTD 1068

Query: 893  RRQPQTTSRKDWNKRPSTGGKDSTRQRREMKPSKPAFHKAGPKAKFHKR 1039
                +  SR    KR +T    S+ +R  M   +      G + KF +R
Sbjct: 1069 NASAEDGSRFKMRKRAAT----SSSKRSSMVDGR----GDGRRTKFSRR 1109


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