BLASTX nr result
ID: Cimicifuga21_contig00021526
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00021526
(1161 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267... 252 1e-64
gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum] 243 7e-62
gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsu... 242 1e-61
ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244... 242 1e-61
emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera] 238 3e-60
>ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267532 [Vitis vinifera]
Length = 320
Score = 252 bits (643), Expect = 1e-64
Identities = 150/312 (48%), Positives = 191/312 (61%), Gaps = 3/312 (0%)
Frame = +2
Query: 68 VFLKLYLPFITEFLISELPELWISLRSWLTPPYLYVVINFIIITIAASSKFQQKVDEPME 247
V LK+ +P + EF +SE+P +W + SWL PPYLY+VINFIII I ASSK Q KV+EP
Sbjct: 29 VALKISVPVVVEFAVSEVPSIWSFVLSWLRPPYLYLVINFIIIIIVASSKLQHKVEEP-- 86
Query: 248 GVIPEPVKIQPDFVVAPGYD---ELVVLKSPVEVRPEFGFQVVMENTKFETAAPEVYQQE 418
PE +I VA Y VV K+ VE+RPEFG+ V N E AP+ +
Sbjct: 87 ---PETAEITISSAVAMDYAVPYNGVVSKNVVELRPEFGY-VYDANAVVEARAPDAKTEM 142
Query: 419 EAVVMISKXXXXXXXXXXXFVISRSKEIPTRTESMEIPVEYSLSKEKPPVSVRFGHRKIS 598
+ + M F ISRS P R +SME + EKP VS+RFGHR+
Sbjct: 143 KGLEMNDSDE---------FTISRSSWTPERKDSME----NMIPAEKPLVSMRFGHRRAV 189
Query: 599 KGSPEAGKSLRVTKPKRQETFENTWKMITEGRSVPLARHLKKSDTWDTRDEPDNAGPPEQ 778
K SPEAGK L V+KPKR +T E+TWK IT+GR +PL RHLKK+D+ +++ + P++
Sbjct: 190 KSSPEAGKVLGVSKPKRHDTLESTWKTITDGRPMPLTRHLKKADSLESQRCSIDL-TPQK 248
Query: 779 VKKXXXXXXXXXXXXXXXXXQGSGKLRKEPSLSQDDLNRRVEAFINKFNEEMKLQRMESL 958
VKK GSGK+++EPSLSQD+LNRRVEAFI KFNEEM+LQR ESL
Sbjct: 249 VKKSETFTDRSSTNSSVASSPGSGKMKREPSLSQDELNRRVEAFIKKFNEEMRLQRQESL 308
Query: 959 NRYKEMISREAQ 994
N+Y EMI R A+
Sbjct: 309 NQYNEMIRRGAR 320
>gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]
Length = 331
Score = 243 bits (620), Expect = 7e-62
Identities = 151/329 (45%), Positives = 187/329 (56%), Gaps = 25/329 (7%)
Frame = +2
Query: 74 LKLYLPFITEFLISELPELWISLRSWLTPPYLYVVINFIIITIAASSKFQQKVDEP--ME 247
LK+ +P + EF +S+ P W RSWL PPYLYVVIN IIITIAASS+F Q E ME
Sbjct: 27 LKISVPLVLEFSVSQAPLWWSGFRSWLKPPYLYVVINGIIITIAASSRFNQNNGEKDQME 86
Query: 248 GVIPEPVKIQPDFVVAPGYDELVVLKSPVEVRPEFGFQVVMENTKFETAAPEVYQQEEAV 427
+ P P KI D Y+ S +F ++ EN + E V ++E V
Sbjct: 87 QMQPRP-KISADQQPMVEYETKSGWDSDAVESSDFVYE---ENQRGEEVETRVSEEESNV 142
Query: 428 VMISKXXXXXXXXXXXFVISRSKEIP-TRTESMEIPVEYSLSKEKPPVSVRFGHRKISKG 604
+ FVIS+S+ IP +RT+S EIP++ L +EKP S RFGHRK K
Sbjct: 143 AV------KDDRDGNEFVISKSEWIPPSRTDSSEIPLDALLIQEKPAPSSRFGHRKPVKA 196
Query: 605 SPEAGKSLRVTKPKRQETFENTWKMITEGRSVPLARHLKKSDTWDT-------------- 742
+PE G++L+ KPKR ET ENTWKMITEG+S+PL+RHLKKSDTW+
Sbjct: 197 NPEGGRALKAAKPKRHETLENTWKMITEGKSMPLSRHLKKSDTWENHGRDINMEALTSSP 256
Query: 743 --------RDEPDNAGPPEQVKKXXXXXXXXXXXXXXXXXQGSGKLRKEPSLSQDDLNRR 898
RD + PPEQV SGKLRKEPSLSQD+LNRR
Sbjct: 257 LMKKSETFRDRTNYQLPPEQVSS----------------FPASGKLRKEPSLSQDELNRR 300
Query: 899 VEAFINKFNEEMKLQRMESLNRYKEMISR 985
VEAFI KFN+EM+LQR ESLN+Y EM+ R
Sbjct: 301 VEAFIKKFNDEMRLQRQESLNQYMEMVDR 329
>gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsutum]
Length = 331
Score = 242 bits (618), Expect = 1e-61
Identities = 152/329 (46%), Positives = 188/329 (57%), Gaps = 25/329 (7%)
Frame = +2
Query: 74 LKLYLPFITEFLISELPELWISLRSWLTPPYLYVVINFIIITIAASSKFQQKVDEP--ME 247
LK+ +P + EF +S+ P W RSWL PPYLYVVIN IIITIAASS+F Q E ME
Sbjct: 27 LKISVPLVLEFSVSQAPLWWSGFRSWLKPPYLYVVINGIIITIAASSRFNQNNGEKDQME 86
Query: 248 GVIPEPVKIQPDFVVAPGYDELVVLKSPVEVRPEFGFQVVMENTKFETAAPEVYQQEEAV 427
+ P P KI D YD S +F ++ EN + E A V ++E V
Sbjct: 87 QMQPRP-KISEDQQPIVEYDTKSGWGSDAVESSDFVYE---ENQRGEEVATRVSEEESNV 142
Query: 428 VMISKXXXXXXXXXXXFVISRSKEIP-TRTESMEIPVEYSLSKEKPPVSVRFGHRKISKG 604
+ FVIS+S+ IP +RT+S EIP++ L +EKP S R GHRK K
Sbjct: 143 AV------EDDRDGNEFVISKSEWIPPSRTDSSEIPLDALLIQEKPAPSSRSGHRKPVKV 196
Query: 605 SPEAGKSLRVTKPKRQETFENTWKMITEGRSVPLARHLKKSDTWDT-------------- 742
+PE G++L+ KPKR ET ENTWKMITEG+S+PL+RHLKKSDTW+
Sbjct: 197 NPEGGRALKAAKPKRHETLENTWKMITEGKSMPLSRHLKKSDTWENHGRDINVEALTSSP 256
Query: 743 --------RDEPDNAGPPEQVKKXXXXXXXXXXXXXXXXXQGSGKLRKEPSLSQDDLNRR 898
RD + PPEQV SGKLRKEPSLSQD+LNRR
Sbjct: 257 LMKKSETFRDRTNYQLPPEQVSS----------------FPASGKLRKEPSLSQDELNRR 300
Query: 899 VEAFINKFNEEMKLQRMESLNRYKEMISR 985
VEAFI KFN+EM+LQR ESLN+Y EM++R
Sbjct: 301 VEAFIKKFNDEMRLQRQESLNQYMEMVNR 329
>ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244739 [Vitis vinifera]
Length = 330
Score = 242 bits (617), Expect = 1e-61
Identities = 153/323 (47%), Positives = 180/323 (55%), Gaps = 14/323 (4%)
Frame = +2
Query: 68 VFLKLYLPFITEFLISELPELWISLRSWLTPPYLYVVINFIIITIAASSKFQQKVDEPME 247
V L+ +P I+EF +S +P +W S RSWL PPYLYV+IN IIITIAASSKF + +
Sbjct: 29 VILRQSIPVISEFAVSGVPVMWSSFRSWLKPPYLYVIINGIIITIAASSKFHRMNHQDR- 87
Query: 248 GVIPEPVKIQPDFVVAPGYDELVVLKSPVEVRPEFGFQVVMENTKFETAAPEVYQQEEAV 427
PE K P + R EF +++ P VY+Q E
Sbjct: 88 ---PE-----------------TAAKDPEDERTEFTYEMKNPPEFVGLETPIVYEQREVT 127
Query: 428 VMISKXXXXXXXXXXX--FVISRSKEIPT------RTESMEIPVEYSLSKEKPPVSVRFG 583
+ K VISRS P R ES EIP+E LS EKP VS RFG
Sbjct: 128 ISEVKNVADSPVVEDEEELVISRSTTPPLPPSPLLRRESSEIPLECLLSTEKPLVSSRFG 187
Query: 584 HRKISKGSPEA--GKSLRVTKPKRQETFENTWKMITEGRSVPLARHLKKSDTWDTRDEP- 754
HRK K SPEA GK LRV+KPKR ET ENTWKMIT+GR +PL RHLKKSDTW+
Sbjct: 188 HRKPIKASPEASGGKVLRVSKPKRHETLENTWKMITDGRHMPLTRHLKKSDTWENHGRHI 247
Query: 755 ---DNAGPPEQVKKXXXXXXXXXXXXXXXXXQGSGKLRKEPSLSQDDLNRRVEAFINKFN 925
+++ P K S KLRK+PSLSQD+LNRRVEAFI KFN
Sbjct: 248 VVREDSSPQRVNKSETFKDRTNNPPPSLTSPLDSVKLRKDPSLSQDELNRRVEAFIKKFN 307
Query: 926 EEMKLQRMESLNRYKEMISREAQ 994
EEM+LQR ESLN+YKEMISR AQ
Sbjct: 308 EEMRLQRQESLNQYKEMISRGAQ 330
>emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera]
Length = 407
Score = 238 bits (606), Expect = 3e-60
Identities = 153/323 (47%), Positives = 178/323 (55%), Gaps = 14/323 (4%)
Frame = +2
Query: 68 VFLKLYLPFITEFLISELPELWISLRSWLTPPYLYVVINFIIITIAASSKFQQKVDEPME 247
V L+ +P I+EF +S +P W S RSWL PPYLYV+IN IIITIAASSKF + +
Sbjct: 106 VILRQSIPVISEFAVSGVPVXWSSFRSWLKPPYLYVIINGIIITIAASSKFHRMNHQDR- 164
Query: 248 GVIPEPVKIQPDFVVAPGYDELVVLKSPVEVRPEFGFQVVMENTKFETAAPEVYQQEEAV 427
PE K P + R EF +++ P VY+Q E
Sbjct: 165 ---PE-----------------TAAKDPEDERTEFTYEMKNPPEFVGLETPIVYEQREVT 204
Query: 428 VMISKXXXXXXXXXXX--FVISRSKEIPT------RTESMEIPVEYSLSKEKPPVSVRFG 583
+ K ISRS P R ES EIP+E LS EKP VS RFG
Sbjct: 205 ISEVKXVADSPVVEDEEELXISRSTTPPLPPSPLLRRESSEIPLECLLSTEKPLVSSRFG 264
Query: 584 HRKISKGSPEA--GKSLRVTKPKRQETFENTWKMITEGRSVPLARHLKKSDTWDTRDEP- 754
HRK K SPEA GK LRV+KPKR ET ENTWKMIT+GR +PL RHLKKSDTW+
Sbjct: 265 HRKPIKASPEASGGKVLRVSKPKRHETLENTWKMITDGRHMPLTRHLKKSDTWENHGRHI 324
Query: 755 ---DNAGPPEQVKKXXXXXXXXXXXXXXXXXQGSGKLRKEPSLSQDDLNRRVEAFINKFN 925
+++ P K S KLRK+PSLSQD+LNRRVEAFI KFN
Sbjct: 325 VVREDSSPQRVNKSETFKDRTNNPPPSLTSPLDSVKLRKDPSLSQDELNRRVEAFIKKFN 384
Query: 926 EEMKLQRMESLNRYKEMISREAQ 994
EEM LQR ESLN+YKEMISR AQ
Sbjct: 385 EEMXLQRQESLNQYKEMISRGAQ 407