BLASTX nr result

ID: Cimicifuga21_contig00021523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021523
         (1313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272060.1| PREDICTED: ABC transporter B family member 2...   487   e-135
ref|XP_002315672.1| ABC transporter family protein [Populus tric...   464   e-128
ref|XP_003613125.1| ABC transporter B family member [Medicago tr...   461   e-127
ref|XP_003517500.1| PREDICTED: ABC transporter B family member 2...   453   e-125
ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata] gi...   450   e-124

>ref|XP_002272060.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
            [Vitis vinifera]
          Length = 705

 Score =  487 bits (1254), Expect = e-135
 Identities = 260/412 (63%), Positives = 301/412 (73%), Gaps = 1/412 (0%)
 Frame = -2

Query: 1234 PHMALPLLNSQPSPITFSFPSRQHPLLSLPRN-KSHFSKSQSPPSLLTLIRTKTNSFSPL 1058
            P MALPL +  P     +F +  H +     N K  F +  SPP+       + NSFS  
Sbjct: 12   PSMALPLRS--PFHRKHAFNNTIHGISRFTTNTKLPFFQCTSPPNC------RLNSFSTP 63

Query: 1057 KTAFFNEFTVQNLHXXXXXXXXXXXXGFMEKLPKWVVFLQSIRPGGSFWRFPAHAEVGIN 878
            K+A  N F+V N +             F ++  + V F++SI PGGS+W    HA+  + 
Sbjct: 64   KSASVNGFSVHNSNPEGSENDQVE---FPKRFRELVHFIRSIWPGGSWWSLSDHADFIMT 120

Query: 877  TKPVTALFALRRMWDLLENDRWVIYSXXXXXXXXXLSEISIPHFLTASIFSAQSGATAVF 698
             KPVT L AL+RMW L+  DRW+I++         +SEISIPHFLTASIFSAQSG   VF
Sbjct: 121  AKPVTVLRALQRMWGLVAKDRWIIFAAFSALVLAAVSEISIPHFLTASIFSAQSGEIVVF 180

Query: 697  KGNAKFMILLCFTSGIGSGLRGCCFSIANMILVKRMRERLYSALLFQDISFFDSETVGDL 518
              N   ++ LCF SGI SGLRGCCF IANMILVKRMRE LYSALLFQDISFFD+ETVGDL
Sbjct: 181  HRNVGLLVFLCFASGICSGLRGCCFGIANMILVKRMRETLYSALLFQDISFFDNETVGDL 240

Query: 517  TSRLGSDCQQVSRVIGNDLNMILRNILQGTGALIYLFILSWPLALSTLTICSVLATVMLF 338
            TSRLG+DCQQVSRVIGNDLN+ILRN+LQGTGALIYL +LSWPL L T+ ICS L  +ML 
Sbjct: 241  TSRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLVLSWPLGLCTMMICSTLLIIMLL 300

Query: 337  YGQYQKKAAALTQEFAACANEVTQETFSLMRTVRVYGTEKQELGRYQQWLKKLADISLRQ 158
            YG+YQKKAA L QEF A ANEV QETFSLMRTVRVYGTE+QE+GRY+QWL K+ADISLRQ
Sbjct: 301  YGRYQKKAAKLIQEFTASANEVAQETFSLMRTVRVYGTEEQEVGRYKQWLGKIADISLRQ 360

Query: 157  SLAYGFWNLSFSTLYHSTQVIAVLVGGASIMAGHITAEQLTKFILYCEWLIY 2
            S AYG WNLSF+TLYHSTQVIAVL+GG SI+AGHITAEQLTKFILY EWLIY
Sbjct: 361  SAAYGLWNLSFNTLYHSTQVIAVLIGGMSILAGHITAEQLTKFILYSEWLIY 412


>ref|XP_002315672.1| ABC transporter family protein [Populus trichocarpa]
            gi|222864712|gb|EEF01843.1| ABC transporter family
            protein [Populus trichocarpa]
          Length = 797

 Score =  464 bits (1195), Expect = e-128
 Identities = 234/323 (72%), Positives = 263/323 (81%)
 Frame = -2

Query: 970  EKLPKWVVFLQSIRPGGSFWRFPAHAEVGINTKPVTALFALRRMWDLLENDRWVIYSXXX 791
            +++ +++ FL SI PGG++W F   A++ I  KPVT   AL RMW L+  DRWVI++   
Sbjct: 102  KRIRRFIEFLPSILPGGNWWSFSDEADIKIMAKPVTVWRALTRMWHLVAQDRWVIFAAFT 161

Query: 790  XXXXXXLSEISIPHFLTASIFSAQSGATAVFKGNAKFMILLCFTSGIGSGLRGCCFSIAN 611
                  LSEISIPHFLTASIFSAQ+   AVF  N + ++ LC  +GI SG+RGCCF IAN
Sbjct: 162  ALIVAALSEISIPHFLTASIFSAQTATVAVFHRNVRLLVALCVVAGICSGIRGCCFGIAN 221

Query: 610  MILVKRMRERLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNILQG 431
            MILVKRMRE LYSALL QDISFFD+ETVGDLTSRLGSDCQQVSRVIGNDLN+ILRN+LQ 
Sbjct: 222  MILVKRMRETLYSALLLQDISFFDNETVGDLTSRLGSDCQQVSRVIGNDLNLILRNVLQA 281

Query: 430  TGALIYLFILSWPLALSTLTICSVLATVMLFYGQYQKKAAALTQEFAACANEVTQETFSL 251
            TGALIYL ILSW L   TL IC+ LA VML YGQYQKKAA LTQEF A ANEV QETFSL
Sbjct: 282  TGALIYLIILSWKLGSFTLLICTTLAAVMLIYGQYQKKAAKLTQEFTASANEVAQETFSL 341

Query: 250  MRTVRVYGTEKQELGRYQQWLKKLADISLRQSLAYGFWNLSFSTLYHSTQVIAVLVGGAS 71
            MRTVR+YGTEK ELGRY+ WL+KLA+ISLRQS AYGFWNLSF+TLYHSTQVIAVLVGG S
Sbjct: 342  MRTVRIYGTEKVELGRYKLWLEKLANISLRQSAAYGFWNLSFNTLYHSTQVIAVLVGGTS 401

Query: 70   IMAGHITAEQLTKFILYCEWLIY 2
            I+AGHITAEQLTKFILY EWLIY
Sbjct: 402  ILAGHITAEQLTKFILYSEWLIY 424


>ref|XP_003613125.1| ABC transporter B family member [Medicago truncatula]
            gi|355514460|gb|AES96083.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 712

 Score =  461 bits (1185), Expect = e-127
 Identities = 239/380 (62%), Positives = 283/380 (74%)
 Frame = -2

Query: 1141 NKSHFSKSQSPPSLLTLIRTKTNSFSPLKTAFFNEFTVQNLHXXXXXXXXXXXXGFMEKL 962
            N+ HF+ S S   LL+         S +K++  NE ++ N               F++++
Sbjct: 42   NRHHFTLSSSKRILLS---------SSIKSSSINEVSIHN----NSESASNASDEFLDRI 88

Query: 961  PKWVVFLQSIRPGGSFWRFPAHAEVGINTKPVTALFALRRMWDLLENDRWVIYSXXXXXX 782
             K V FL SI PGG++W F    EV +  +PVT  +AL +MW+L+  DRWVI++      
Sbjct: 89   RKLVSFLPSIFPGGTWWNFSDDVEVSMFNQPVTVWYALGKMWNLVAKDRWVIFAAFSALI 148

Query: 781  XXXLSEISIPHFLTASIFSAQSGATAVFKGNAKFMILLCFTSGIGSGLRGCCFSIANMIL 602
               +SEISIPHFLTASIFSAQ G   VF GN + +IL+C TSGI SG+RGC F IANMIL
Sbjct: 149  IAAVSEISIPHFLTASIFSAQGGDIKVFHGNVRLLILMCVTSGICSGIRGCFFGIANMIL 208

Query: 601  VKRMRERLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNILQGTGA 422
            VKRMRE LYS+LL QDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+ILRN+LQG G+
Sbjct: 209  VKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGGGS 268

Query: 421  LIYLFILSWPLALSTLTICSVLATVMLFYGQYQKKAAALTQEFAACANEVTQETFSLMRT 242
            LIYL ILSWPL L TL ICS+LA VML YG YQKKAA L QE  A AN V QETFSL+RT
Sbjct: 269  LIYLLILSWPLGLCTLVICSILAAVMLRYGWYQKKAARLIQEVTASANNVAQETFSLIRT 328

Query: 241  VRVYGTEKQELGRYQQWLKKLADISLRQSLAYGFWNLSFSTLYHSTQVIAVLVGGASIMA 62
            VRVYGTE++E GRY+ WL+KLADISLRQS AYGFWN SF+TLYHSTQ+IAVL GG SI++
Sbjct: 329  VRVYGTEEEEHGRYKWWLEKLADISLRQSAAYGFWNFSFNTLYHSTQIIAVLFGGMSILS 388

Query: 61   GHITAEQLTKFILYCEWLIY 2
            GHITAE+LTKFILY EWLIY
Sbjct: 389  GHITAEKLTKFILYSEWLIY 408


>ref|XP_003517500.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
            [Glycine max]
          Length = 701

 Score =  453 bits (1166), Expect = e-125
 Identities = 244/409 (59%), Positives = 290/409 (70%), Gaps = 2/409 (0%)
 Frame = -2

Query: 1222 LPLLNSQPSPITFSF-PSRQHPLLSLPRNKSHFSKSQSPPSLLTLIRTKTNSFSPL-KTA 1049
            +PLL S+  P +F   P R      +  ++  F+ + +   L T  R    S  P  K A
Sbjct: 1    MPLLLSRTPPSSFPLTPLRNARAPLITPSQKRFTLAATRIVLFTSRRRILASPPPPPKCA 60

Query: 1048 FFNEFTVQNLHXXXXXXXXXXXXGFMEKLPKWVVFLQSIRPGGSFWRFPAHAEVGINTKP 869
              N  +V N              G ++++ KWV FL SI PGG +W F    +V +  +P
Sbjct: 61   SINGISVPNNPEASGEQQVYSASGLLDRIRKWVGFLPSILPGGRWWEFSGDVDVQVVAQP 120

Query: 868  VTALFALRRMWDLLENDRWVIYSXXXXXXXXXLSEISIPHFLTASIFSAQSGATAVFKGN 689
            VT   AL +MWDL+  DRWVI++         +SEISIPHFLTASIFSAQS   AVF  N
Sbjct: 121  VTVWRALGKMWDLVARDRWVIFAAFSALIVAAVSEISIPHFLTASIFSAQSADLAVFHRN 180

Query: 688  AKFMILLCFTSGIGSGLRGCCFSIANMILVKRMRERLYSALLFQDISFFDSETVGDLTSR 509
             + ++LLC  SGI SG+RGC F IANMILVKRMRE LYS+LL QDISFFD+ETVGDLTSR
Sbjct: 181  VRLLVLLCVASGICSGIRGCFFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSR 240

Query: 508  LGSDCQQVSRVIGNDLNMILRNILQGTGALIYLFILSWPLALSTLTICSVLATVMLFYGQ 329
            LG+DCQQVSRVIGNDLN+I+RN+LQG G+LIYL ILSWPL LSTL +CS+LA VML YG+
Sbjct: 241  LGADCQQVSRVIGNDLNLIMRNVLQGGGSLIYLLILSWPLGLSTLVVCSILAAVMLRYGR 300

Query: 328  YQKKAAALTQEFAACANEVTQETFSLMRTVRVYGTEKQELGRYQQWLKKLADISLRQSLA 149
            YQKKAA L QE  A AN+V QE FSL+RTVRVYGTE++E GRY+ WL+KLADISLRQS A
Sbjct: 301  YQKKAARLIQEVTASANDVAQEMFSLIRTVRVYGTEEEEHGRYKWWLEKLADISLRQSAA 360

Query: 148  YGFWNLSFSTLYHSTQVIAVLVGGASIMAGHITAEQLTKFILYCEWLIY 2
            YG WN SF+ LYHSTQVIAVL GG SI+AGHITAE+LTKFILY EWLIY
Sbjct: 361  YGVWNFSFNILYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIY 409


>ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata] gi|297333157|gb|EFH63575.1|
            ATTAP1 [Arabidopsis lyrata subsp. lyrata]
          Length = 700

 Score =  450 bits (1157), Expect = e-124
 Identities = 226/323 (69%), Positives = 255/323 (78%)
 Frame = -2

Query: 970  EKLPKWVVFLQSIRPGGSFWRFPAHAEVGINTKPVTALFALRRMWDLLENDRWVIYSXXX 791
            EK+ + + F+++I PGGS+W F    +     KPVT   AL RMW+L+  DRWVI++   
Sbjct: 85   EKIRQCIDFIRTILPGGSWWSFSDEVDGRFIAKPVTVWRALTRMWELVAEDRWVIFAAFS 144

Query: 790  XXXXXXLSEISIPHFLTASIFSAQSGATAVFKGNAKFMILLCFTSGIGSGLRGCCFSIAN 611
                  LSEI+IPHFLTASIFSAQSG  AVF+ N K ++ LC TSGI SG+RGC F IAN
Sbjct: 145  TLIVAALSEITIPHFLTASIFSAQSGDIAVFRRNVKLLVTLCVTSGICSGIRGCFFGIAN 204

Query: 610  MILVKRMRERLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNILQG 431
            MILVKRMRE LYS LLFQDISFFDS+TVGDLTSRLGSDCQQVSRVIGNDLNMI RN+LQG
Sbjct: 205  MILVKRMRETLYSTLLFQDISFFDSQTVGDLTSRLGSDCQQVSRVIGNDLNMIFRNVLQG 264

Query: 430  TGALIYLFILSWPLALSTLTICSVLATVMLFYGQYQKKAAALTQEFAACANEVTQETFSL 251
            TGALIYL ILSWPL L TL IC +LA VM  YG YQKK A L QE  A ANEV QET+SL
Sbjct: 265  TGALIYLLILSWPLGLCTLVICCILAAVMFVYGMYQKKTAKLIQEITASANEVAQETYSL 324

Query: 250  MRTVRVYGTEKQELGRYQQWLKKLADISLRQSLAYGFWNLSFSTLYHSTQVIAVLVGGAS 71
            MRTVRVYGTEKQE  RY  WL++LADISLRQS AYG WN SF+TLYH+TQ+IAVL+GG S
Sbjct: 325  MRTVRVYGTEKQEFKRYNHWLQRLADISLRQSAAYGIWNWSFNTLYHATQIIAVLIGGLS 384

Query: 70   IMAGHITAEQLTKFILYCEWLIY 2
            I+AG ITAEQLTKF+LY EWLIY
Sbjct: 385  ILAGQITAEQLTKFLLYSEWLIY 407


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