BLASTX nr result

ID: Cimicifuga21_contig00021522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021522
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524529.1| PREDICTED: uncharacterized protein LOC100820...   122   4e-26
gb|ACU19699.1| unknown [Glycine max]                                  120   1e-25
gb|AFK34652.1| unknown [Lotus japonicus]                              119   3e-25
ref|XP_002316603.1| predicted protein [Populus trichocarpa] gi|1...   115   5e-24
ref|XP_002524438.1| conserved hypothetical protein [Ricinus comm...   115   7e-24

>ref|XP_003524529.1| PREDICTED: uncharacterized protein LOC100820016 [Glycine max]
          Length = 77

 Score =  122 bits (306), Expect = 4e-26
 Identities = 61/77 (79%), Positives = 66/77 (85%)
 Frame = -2

Query: 480 MASPSDTSNGEVVVRRQNKGAPIKFLLPLIYAPVLPLIRIALRRNPVVRDRLFMAVLAGA 301
           MA+PSD SN E VVRR+N G PIKFLLPLIYAPVLPLIR++LR  PV+RDRLF AVLAGA
Sbjct: 1   MATPSDPSNQEAVVRRRNNGPPIKFLLPLIYAPVLPLIRLSLRHKPVLRDRLFTAVLAGA 60

Query: 300 FIHGGYLVTDLYDSESK 250
           F HG YLVTDLYD ESK
Sbjct: 61  FAHGFYLVTDLYDIESK 77


>gb|ACU19699.1| unknown [Glycine max]
          Length = 77

 Score =  120 bits (302), Expect = 1e-25
 Identities = 60/77 (77%), Positives = 66/77 (85%)
 Frame = -2

Query: 480 MASPSDTSNGEVVVRRQNKGAPIKFLLPLIYAPVLPLIRIALRRNPVVRDRLFMAVLAGA 301
           MA+PSD SN E VVRR+N G PIKFLLPLIYAPVLPLIR++LR  PV+RDRLF AVLAGA
Sbjct: 1   MATPSDPSNQEAVVRRRNNGPPIKFLLPLIYAPVLPLIRLSLRHKPVLRDRLFTAVLAGA 60

Query: 300 FIHGGYLVTDLYDSESK 250
           F HG YLVTDLYD ES+
Sbjct: 61  FAHGFYLVTDLYDIESE 77


>gb|AFK34652.1| unknown [Lotus japonicus]
          Length = 80

 Score =  119 bits (299), Expect = 3e-25
 Identities = 63/80 (78%), Positives = 66/80 (82%), Gaps = 3/80 (3%)
 Frame = -2

Query: 480 MASPS---DTSNGEVVVRRQNKGAPIKFLLPLIYAPVLPLIRIALRRNPVVRDRLFMAVL 310
           MA PS   D  N E VVR++N GAPIKFLLPLIYAPVLPLIRIALR  PVVRDRLF AVL
Sbjct: 1   MAPPSESFDPFNQEPVVRKKNNGAPIKFLLPLIYAPVLPLIRIALRHKPVVRDRLFFAVL 60

Query: 309 AGAFIHGGYLVTDLYDSESK 250
           AGAF HG YLVTDLYD+ESK
Sbjct: 61  AGAFAHGSYLVTDLYDAESK 80


>ref|XP_002316603.1| predicted protein [Populus trichocarpa] gi|118483510|gb|ABK93653.1|
           unknown [Populus trichocarpa]
           gi|222859668|gb|EEE97215.1| predicted protein [Populus
           trichocarpa]
          Length = 79

 Score =  115 bits (288), Expect = 5e-24
 Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
 Frame = -2

Query: 480 MASPSDTSNGEVV--VRRQNKGAPIKFLLPLIYAPVLPLIRIALRRNPVVRDRLFMAVLA 307
           MASPSD +N E    +RR+  G PIKFL+PL+YAPVLPLIR+ LR+NPVVRDRLF AVL 
Sbjct: 1   MASPSDPTNPEAAAAIRRKKNGPPIKFLVPLVYAPVLPLIRLTLRKNPVVRDRLFTAVLV 60

Query: 306 GAFIHGGYLVTDLYDSESK 250
           GAF HG YLVTD+YDSESK
Sbjct: 61  GAFAHGFYLVTDIYDSESK 79


>ref|XP_002524438.1| conserved hypothetical protein [Ricinus communis]
           gi|223536226|gb|EEF37878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 80

 Score =  115 bits (287), Expect = 7e-24
 Identities = 58/79 (73%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
 Frame = -2

Query: 483 AMASPSDTS-NGEVVVRRQNKGAPIKFLLPLIYAPVLPLIRIALRRNPVVRDRLFMAVLA 307
           A +S SD S   +V VR+QN G P+KFL+PL+YAP+LPLIRIALRRNPVVRDRLF AVLA
Sbjct: 2   ASSSSSDPSVRRDVAVRKQNNGPPVKFLVPLVYAPILPLIRIALRRNPVVRDRLFTAVLA 61

Query: 306 GAFIHGGYLVTDLYDSESK 250
           GAF HG YLVTD+YD ESK
Sbjct: 62  GAFAHGFYLVTDIYDVESK 80


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