BLASTX nr result

ID: Cimicifuga21_contig00021508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021508
         (1842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like...   412   e-112
ref|XP_002517855.1| DNA binding protein, putative [Ricinus commu...   384   e-104
gb|AFF60405.1| golden 2-like 1 transcription factor [Capsicum an...   368   3e-99
ref|NP_001241943.1| uncharacterized protein LOC100799248 [Glycin...   355   3e-95
emb|CBI21901.3| unnamed protein product [Vitis vinifera]              338   1e-94

>ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like [Vitis vinifera]
          Length = 432

 Score =  412 bits (1059), Expect = e-112
 Identities = 239/430 (55%), Positives = 271/430 (63%), Gaps = 21/430 (4%)
 Frame = +2

Query: 341  VSVSPLISNNG-REGEMESFSI---DFEEFSCGNLLXXXXXXXXXXXXXXXXVLPDLEMD 508
            ++VSPL S N  REGEMESFSI   DF +F  GNLL                +LPDLEMD
Sbjct: 2    LAVSPLRSTNDEREGEMESFSIGADDFPDFYEGNLLECIDFDDLFIGIHDGEILPDLEMD 61

Query: 509  SDMFAEFSLSGGDESEFNISLSNEKVESG-RIEEEDRVS--GSGPGL----NSNQGEEIV 667
             ++ AEFS+S G+ES+ N S++ +KVE   + EEED+VS  GSG GL    +S++GEEIV
Sbjct: 62   PEILAEFSVSAGEESDVNTSVTEKKVEDNPKKEEEDKVSDTGSGSGLGYGSSSSRGEEIV 121

Query: 668  SKRQELVKVSSPPKEXXXXXXXXXXXXXXXX---MKVDWTPELHRRFVQAVEQLGMDKAV 838
            SKR E V  ++ PKE                   +KVDWTPELHRRFVQAVEQLG+DKAV
Sbjct: 122  SKRSESVATNASPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAV 181

Query: 839  PSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRQIYXXXXXXS--KR 1012
            PSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+Q+RQ+Y         KR
Sbjct: 182  PSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQKRQMYGVAAGGGGHKR 241

Query: 1013 DM--XXXXXXXXXXXXXXXXXXXXXLHVWGHPAVDKSLMHMWPKHIAHXXXXXXXXXXXX 1186
            +M                       LHVWGHP VD+S MHMWPKH+ H            
Sbjct: 242  EMGGWIPPTMGFPHITPMHHHPFRPLHVWGHPTVDQSAMHMWPKHLPH-SPSPPPPPPPT 300

Query: 1187 XXXXXXXXXXXXXXXXXXXXQLVPSVLTPGTPCFPPTHAPTRFPTPPVPGIPPHAMYKVD 1366
                                Q VP+ LT GTPCFP   A  RF TPPV GIPPH MYKVD
Sbjct: 301  WPPSATPPSPSPDPYWHPHHQRVPNGLTQGTPCFPQPLAAARFATPPVTGIPPHPMYKVD 360

Query: 1367 H---GIGVPSAKSPTHPPLDFHPSKESIDAAIGDVLSKPWQPLPLGLKAPSLDSVMVELQ 1537
            H   GIGVP+  S   P  DFHPSKE+IDAAIGD LSKPWQPLPLGLK PSLD VMVELQ
Sbjct: 361  HNHPGIGVPARHSGPFPLFDFHPSKETIDAAIGDALSKPWQPLPLGLKPPSLDGVMVELQ 420

Query: 1538 RQGVPKIPPT 1567
            RQGVPKIPPT
Sbjct: 421  RQGVPKIPPT 430


>ref|XP_002517855.1| DNA binding protein, putative [Ricinus communis]
            gi|223542837|gb|EEF44373.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 424

 Score =  384 bits (987), Expect = e-104
 Identities = 216/380 (56%), Positives = 247/380 (65%), Gaps = 19/380 (5%)
 Frame = +2

Query: 485  VLPDLEMDSDMFAEFSLS----GGDESEFNISLSNEKVE-SGRIEEEDRVSGSGPGLN-S 646
            VLPDLEMD ++ AEFS+S    GG+ES+ N  +SNEK+E S R +EED++SGSG   + S
Sbjct: 46   VLPDLEMDPEILAEFSVSSAGSGGEESDINTPVSNEKLEDSSRKDEEDKISGSGLDSSLS 105

Query: 647  NQGEEIVSKRQELVKVSSPPKEXXXXXXXXXXXXXXXX------MKVDWTPELHRRFVQA 808
             +GEEIVSKR E V V+   KE                      +KVDWTP+LHRRFVQA
Sbjct: 106  TRGEEIVSKRDESVVVNLVSKESDKGRKSSSTQAKNSNHQGKRKVKVDWTPDLHRRFVQA 165

Query: 809  VEQLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRQIY- 985
            VEQLG+DKAVPSRILELMGIDCLTRHNIASHLQKYRSH+KHL AREAEAA+W+ RRQ+Y 
Sbjct: 166  VEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAATWSHRRQVYG 225

Query: 986  -XXXXXXSKRDM----XXXXXXXXXXXXXXXXXXXXXLHVWGHPAVDKSLMHMWPKHIAH 1150
                    KR++                         LHVWGHP +++ L+HMWPKH+AH
Sbjct: 226  APGGGGGGKREVTPWHAPTMGFPPITPMHHHHPHFRPLHVWGHPPMEQPLVHMWPKHLAH 285

Query: 1151 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLVPSVLTPGTPCFPPTHAPTRFPTPPV 1330
                                            Q VPS L PGTPCFP   APTRF TPPV
Sbjct: 286  ---SPSPPPPPPRTWSPHPPPDPSYWHHHPHQQRVPSGLIPGTPCFPQPVAPTRFATPPV 342

Query: 1331 PGIPPHAMYKVDHGIGVPSAKS-PTHPPLDFHPSKESIDAAIGDVLSKPWQPLPLGLKAP 1507
            PGIPPHAMYKVD GIGVP+ +S P  PP DFHPSKESIDAAIGDV+SKPW PLPLGLK P
Sbjct: 343  PGIPPHAMYKVDPGIGVPTRQSGPNPPPFDFHPSKESIDAAIGDVISKPWLPLPLGLKPP 402

Query: 1508 SLDSVMVELQRQGVPKIPPT 1567
            SLD V+ ELQRQGV KIPPT
Sbjct: 403  SLDGVIGELQRQGVAKIPPT 422


>gb|AFF60405.1| golden 2-like 1 transcription factor [Capsicum annuum]
          Length = 447

 Score =  368 bits (945), Expect = 3e-99
 Identities = 231/448 (51%), Positives = 261/448 (58%), Gaps = 39/448 (8%)
 Frame = +2

Query: 341  VSVSPLISNNGREGE-MESFSI----DFEEFSCGNLLXXXXXXXXXXXXXXXXVLPDLEM 505
            ++VSPL +   R+   MESF I    DF +F   NLL                VLPDLEM
Sbjct: 2    LAVSPLSNTTARDDNTMESFGIGGGVDFPDFVGENLLDSIDFDDLFVGINDGDVLPDLEM 61

Query: 506  DSDMFAEFSLSGGDESEFN----------ISLSNEKVESGRIEEEDRVSGSGPGLNS-NQ 652
            D+++ AEFS+S GDES+ N          IS + +KVE  + E E   S  G GL S NQ
Sbjct: 62   DTEILAEFSVSSGDESDVNNYSSSNKTTFISTATKKVER-KDETERAASDVGSGLTSLNQ 120

Query: 653  GEEIVSKRQE-----LVKVSSPPKEXXXXXXXXXXXXXXXX-MKVDWTPELHRRFVQAVE 814
            GEEIVS ++       VK +  PKE                 +KVDWTPELHRRFVQAVE
Sbjct: 121  GEEIVSTQKSEESTLQVKQNITPKESDKGKKSSKNNLPVKRKVKVDWTPELHRRFVQAVE 180

Query: 815  QLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRQIY--- 985
            QLG+DKAVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+QRRQ+Y   
Sbjct: 181  QLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQLYCGA 240

Query: 986  -XXXXXXSKRDM-----XXXXXXXXXXXXXXXXXXXXXLHVWGHPAVDKSLMHMWPKHIA 1147
                    KRDM                          LHVWGHP+VD+S MHMWPKH+A
Sbjct: 241  AVVGGGGGKRDMTPWPAPTIGFPPPPTMAAPMPHHFRPLHVWGHPSVDQSYMHMWPKHLA 300

Query: 1148 HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLVPSVLTPGTPCFPPTHAPTRFP--T 1321
                                             Q VP+ LTPGTP FP   APTR+P   
Sbjct: 301  PSPSPQHPSPAWAPPPHLHPPPPSDPSFWHPHHQRVPNPLTPGTPYFPAPIAPTRYPGGH 360

Query: 1322 PPVPGIPP--HAMYKVDHGIGVPSAKSPTH----PPLDFHPSKESIDAAIGDVLSKPWQP 1483
             PVPGIPP  HAMYKVDH   V S   PT     PP DFHPSKESIDAAIGDVLSKPW P
Sbjct: 361  HPVPGIPPAAHAMYKVDH---VRSTAPPTQPLPKPPCDFHPSKESIDAAIGDVLSKPWLP 417

Query: 1484 LPLGLKAPSLDSVMVELQRQGVPKIPPT 1567
            LPLGLK P++DSV+ ELQRQGVPKIPPT
Sbjct: 418  LPLGLKPPAVDSVLGELQRQGVPKIPPT 445


>ref|NP_001241943.1| uncharacterized protein LOC100799248 [Glycine max]
            gi|255638900|gb|ACU19752.1| unknown [Glycine max]
          Length = 426

 Score =  355 bits (910), Expect = 3e-95
 Identities = 218/448 (48%), Positives = 257/448 (57%), Gaps = 38/448 (8%)
 Frame = +2

Query: 341  VSVSPLISN---NGREGEME-SFS--------IDFEEFSCGNLLXXXXXXXXXXXXXXXX 484
            ++VSPL SN     ++GEME +FS        + F + S GNLL                
Sbjct: 2    LAVSPLRSNIKDEKKQGEMEGNFSMATTTTDDVVFGDLSEGNLLESINFDELFVGIDTHG 61

Query: 485  -VLPDLEMDSDMFAEFSL---SGGDESEFNISLSNEKVE---------SGRIEEEDRVS- 622
             VLPDLEM    F EFS+   +G + SE N S  + K+E         S + EEED+ S 
Sbjct: 62   DVLPDLEM----FGEFSVDVSTGEESSEMNSSAKSSKLENDQNVIATTSKKEEEEDKTSC 117

Query: 623  -GSGPGLNSNQGEEIVSKRQELVKVSSPPKEXXXXXXXXXXXXXXXX-----------MK 766
              SG  L SN+GEEIVS+R E V V+  PK+                           +K
Sbjct: 118  NASGQDLGSNRGEEIVSERDESVVVNPAPKDGGKGRKSSSAQSKNNSSSNNNPQGKRKVK 177

Query: 767  VDWTPELHRRFVQAVEQLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRARE 946
            VDWTPELHRRFVQAVEQLG+DKAVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL ARE
Sbjct: 178  VDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLARE 237

Query: 947  AEAASWNQRRQIYXXXXXXSKRDMXXXXXXXXXXXXXXXXXXXXXLHVWGHPAVDKSLMH 1126
            AEAASW+QRRQ+        +                        LHVWGHP++D+S MH
Sbjct: 238  AEAASWSQRRQL--CAGGGKREGSPWLAPTMGFPPMTPPMHHFRPLHVWGHPSMDQSFMH 295

Query: 1127 MWPKHIAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLVPSVLTPGTPCFPPTHAP 1306
            MWPKH+ +                                QLVP+ L PGT CFP    P
Sbjct: 296  MWPKHLPN------------SPPLSWPPPAAPPQEPSFWHQLVPNALIPGTACFPQLLTP 343

Query: 1307 TRFPTPPVPGIPPHAMYKVDHGIGVPSAKSPTHPPLDFHPSKESIDAAIGDVLSKPWQPL 1486
            TRF +PPVPGIPPHAMYK DH IG+P       P  DF+PSKE IDAAIGDVLSKPW PL
Sbjct: 344  TRFGSPPVPGIPPHAMYKADHDIGLPG------PLFDFYPSKECIDAAIGDVLSKPWLPL 397

Query: 1487 PLGLKAPSLDSVMVELQRQGVPKIPPTT 1570
            P+GLKAP+LDSVM ELQRQG+P IPP++
Sbjct: 398  PIGLKAPALDSVMSELQRQGIPNIPPSS 425


>emb|CBI21901.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  338 bits (866), Expect(2) = 1e-94
 Identities = 185/318 (58%), Positives = 202/318 (63%), Gaps = 10/318 (3%)
 Frame = +2

Query: 644  SNQGEEIVSKRQELVKVSSPPKEXXXXXXXXXXXXXXXX---MKVDWTPELHRRFVQAVE 814
            S++GEEIVSKR E V  ++ PKE                   +KVDWTPELHRRFVQAVE
Sbjct: 53   SSRGEEIVSKRSESVATNASPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVE 112

Query: 815  QLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRQIYXXX 994
            QLG+DKAVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+Q+RQ+Y   
Sbjct: 113  QLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQKRQMYGVA 172

Query: 995  XXXS--KRDM--XXXXXXXXXXXXXXXXXXXXXLHVWGHPAVDKSLMHMWPKHIAHXXXX 1162
                  KR+M                       LHVWGHP VD+S MHMWPKH+ H    
Sbjct: 173  AGGGGHKREMGGWIPPTMGFPHITPMHHHPFRPLHVWGHPTVDQSAMHMWPKHLPH-SPS 231

Query: 1163 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQLVPSVLTPGTPCFPPTHAPTRFPTPPVPGIP 1342
                                        Q VP+ LT GTPCFP   A  RF TPPV GIP
Sbjct: 232  PPPPPPPTWPPSATPPSPSPDPYWHPHHQRVPNGLTQGTPCFPQPLAAARFATPPVTGIP 291

Query: 1343 PHAMYKVDH---GIGVPSAKSPTHPPLDFHPSKESIDAAIGDVLSKPWQPLPLGLKAPSL 1513
            PH MYKVDH   GIGVP+  S   P  DFHPSKE+IDAAIGD LSKPWQPLPLGLK PSL
Sbjct: 292  PHPMYKVDHNHPGIGVPARHSGPFPLFDFHPSKETIDAAIGDALSKPWQPLPLGLKPPSL 351

Query: 1514 DSVMVELQRQGVPKIPPT 1567
            D VMVELQRQGVPKIPPT
Sbjct: 352  DGVMVELQRQGVPKIPPT 369



 Score = 37.7 bits (86), Expect(2) = 1e-94
 Identities = 21/52 (40%), Positives = 26/52 (50%)
 Frame = +3

Query: 405 TLKNSPVGTCLMILISMIYSLASAREMCYRIWRWIQICLLSFHLVEAMNRSS 560
           T + S  GTC  + IS I+S A   E   R WRW Q   L+F L    N +S
Sbjct: 2   TSRTSMKGTCSNVSISTIFSSAYTTERYCRTWRWTQKFSLNFPLAPEKNPTS 53


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