BLASTX nr result

ID: Cimicifuga21_contig00021498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021498
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI15167.1| GASA-like protein [Gossypium hirsutum]                 118   1e-24
gb|AGE15500.1| GA-stimulated transcript-like protein 4 [Gossypiu...   117   2e-24
ref|XP_002300026.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
gb|AFK41959.1| unknown [Lotus japonicus]                              111   1e-22
gb|AFK38851.1| unknown [Lotus japonicus]                              111   1e-22

>gb|ABI15167.1| GASA-like protein [Gossypium hirsutum]
          Length = 264

 Score =  118 bits (295), Expect = 1e-24
 Identities = 49/69 (71%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = -1

Query: 426 LPPVKIS-ECPKLCGGRCKLHSRIRHCSRVCVTCCERCKCVPPGTYGNKEMCGKCYTEMR 250
           LPPV+   +C  LCG RCKLHSR   C R C+TCC+RCKCVPPGTYGN+EMCGKCY++MR
Sbjct: 196 LPPVRTKKDCIPLCGQRCKLHSRTNLCLRACMTCCDRCKCVPPGTYGNREMCGKCYSDMR 255

Query: 249 THGNKLKCP 223
           TH NK KCP
Sbjct: 256 THRNKHKCP 264


>gb|AGE15500.1| GA-stimulated transcript-like protein 4 [Gossypium hirsutum]
          Length = 264

 Score =  117 bits (292), Expect = 2e-24
 Identities = 49/69 (71%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = -1

Query: 426 LPPVKIS-ECPKLCGGRCKLHSRIRHCSRVCVTCCERCKCVPPGTYGNKEMCGKCYTEMR 250
           LPPV+   +C  LCG RCKLHS    C R C+TCC+RCKCVPPGTYGN+EMCGKCYT+MR
Sbjct: 196 LPPVRTKKDCIPLCGQRCKLHSGTNLCLRACMTCCDRCKCVPPGTYGNREMCGKCYTDMR 255

Query: 249 THGNKLKCP 223
           TH NK KCP
Sbjct: 256 THRNKHKCP 264


>ref|XP_002300026.1| predicted protein [Populus trichocarpa] gi|222847284|gb|EEE84831.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  114 bits (284), Expect = 2e-23
 Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = -1

Query: 423 PPVKI-SECPKLCGGRCKLHSRIRHCSRVCVTCCERCKCVPPGTYGNKEMCGKCYTEMRT 247
           PPV+  S+C  LCG RCKLHSR R C R C+TCC+RCKCVPPGTYGN+E CGKCYT+M T
Sbjct: 156 PPVRTRSDCTPLCGQRCKLHSRKRLCVRACMTCCDRCKCVPPGTYGNREKCGKCYTDMTT 215

Query: 246 HGNKLKCP 223
             NK KCP
Sbjct: 216 RRNKPKCP 223


>gb|AFK41959.1| unknown [Lotus japonicus]
          Length = 249

 Score =  111 bits (278), Expect = 1e-22
 Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = -1

Query: 423 PPVK-ISECPKLCGGRCKLHSRIRHCSRVCVTCCERCKCVPPGTYGNKEMCGKCYTEMRT 247
           P VK + +C  LC  RC+LHSR   C+R C+TCC+RCKCVPPGTYGN+E CGKCYT+M T
Sbjct: 182 PIVKSMKDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLT 241

Query: 246 HGNKLKCP 223
           HGNK KCP
Sbjct: 242 HGNKYKCP 249


>gb|AFK38851.1| unknown [Lotus japonicus]
          Length = 231

 Score =  111 bits (278), Expect = 1e-22
 Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = -1

Query: 423 PPVK-ISECPKLCGGRCKLHSRIRHCSRVCVTCCERCKCVPPGTYGNKEMCGKCYTEMRT 247
           P VK + +C  LC  RC+LHSR   C+R C+TCC+RCKCVPPGTYGN+E CGKCYT+M T
Sbjct: 164 PIVKSMKDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLT 223

Query: 246 HGNKLKCP 223
           HGNK KCP
Sbjct: 224 HGNKYKCP 231


Top