BLASTX nr result

ID: Cimicifuga21_contig00021488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021488
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]       115   3e-24
ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, par...   115   5e-24
ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cuc...   115   5e-24
ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...   109   2e-22

>gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
          Length = 934

 Score =  115 bits (289), Expect = 3e-24
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = +2

Query: 59  MGVPSFYRWVADRYPLSITDVIEEEPVEGPNGVLYPVDVLKPNPNNIEYDNLYLDMNGII 238
           MGVP+FYRW+ADRYP SI DV+EEEP++GPNGVL P+DV KPNPN +E+DNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 239 HP 244
           HP
Sbjct: 61  HP 62


>ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
          Length = 254

 Score =  115 bits (287), Expect = 5e-24
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = +2

Query: 59  MGVPSFYRWVADRYPLSITDVIEEEPVEGPNGVLYPVDVLKPNPNNIEYDNLYLDMNGII 238
           MGVP+FYRW+ADRYP SI DV+EEEPV GP+GVL+P+DV KPNPN +E+DNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 239 HP 244
           HP
Sbjct: 61  HP 62


>ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
          Length = 934

 Score =  115 bits (287), Expect = 5e-24
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = +2

Query: 59  MGVPSFYRWVADRYPLSITDVIEEEPVEGPNGVLYPVDVLKPNPNNIEYDNLYLDMNGII 238
           MGVP+FYRW+ADRYP SI DV+EEEPV GP+GVL+P+DV KPNPN +E+DNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 239 HP 244
           HP
Sbjct: 61  HP 62


>ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|222838231|gb|EEE76596.1|
           predicted protein [Populus trichocarpa]
          Length = 948

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = +2

Query: 59  MGVPSFYRWVADRYPLSITDVIEEEPVEGPNGVLYPVDVLKPNPNNIEYDNLYLDMNGII 238
           MGVP+FYRW+ADRYPLSI DVIEEEP E  NG   P+DV KPNPN IEYDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60

Query: 239 HP 244
           HP
Sbjct: 61  HP 62


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
           gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
           putative [Ricinus communis]
          Length = 964

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/62 (74%), Positives = 55/62 (88%)
 Frame = +2

Query: 59  MGVPSFYRWVADRYPLSITDVIEEEPVEGPNGVLYPVDVLKPNPNNIEYDNLYLDMNGII 238
           MGVP+FYRW+ADRYPL+I DV+EEEP E  NGV+ P+D+ KPNPN +E+DNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60

Query: 239 HP 244
           HP
Sbjct: 61  HP 62


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