BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021426
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882430.1| hypothetical protein ARALYDRAFT_477858 [Arab...    99   1e-18
ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|2...    98   3e-18
ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap...    94   4e-17
ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|2...    91   4e-16
ref|NP_187218.1| RING/U-box protein [Arabidopsis thaliana] gi|67...    89   2e-15

>ref|XP_002882430.1| hypothetical protein ARALYDRAFT_477858 [Arabidopsis lyrata subsp.
            lyrata] gi|297328270|gb|EFH58689.1| hypothetical protein
            ARALYDRAFT_477858 [Arabidopsis lyrata subsp. lyrata]
          Length = 869

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
 Frame = -2

Query: 1030 TYCVGLGREVPEGNWYCKGCRVSDMGSTNVQVPNPGRETRINNVEDSDPTPQLSVSASSD 851
            TYCVGLGREVPEGNWYC+GCR   +GS + Q  N   + R++    S P+P +      D
Sbjct: 517  TYCVGLGREVPEGNWYCEGCRPVALGSASSQTHNTSEQQRVSGFY-SRPSPLVVSGQYQD 575

Query: 850  PSLMHE------IGILLASPRYPVAADDDIHLSSPTGLGVSTLSGRRRIHRQIRNLLSNN 689
             SL+         G  L SPR P   + D+  SSP+GLG +TLS RR +HR I+N+++++
Sbjct: 576  ASLLVSPRTPFFNGENLFSPRLP---NGDVQGSSPSGLGATTLSSRRTLHRHIQNIINSD 632

Query: 688  RM 683
            R+
Sbjct: 633  RL 634


>ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|222857869|gb|EEE95416.1|
            predicted protein [Populus trichocarpa]
          Length = 810

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 10/123 (8%)
 Frame = -2

Query: 1030 TYCVGLGREVPEGNWYCKGCRVSDMGSTNVQV--PNPGRETRINNVEDSDPTPQLSVSAS 857
            TYCVGLGR+VPEGNWYC  CR   +GST+ Q   P P +    NN+ +  P+P L++   
Sbjct: 439  TYCVGLGRQVPEGNWYCDDCRPVALGSTSSQAQDPLPDQWNSSNNIFNR-PSPILNLDEG 497

Query: 856  SDPSL-------MHEIGILLASPRYPVAADDDIHLSSPTGL-GVSTLSGRRRIHRQIRNL 701
             DP+L       + ++   L+SPR+      DIH++SP  + G STLSGRR +HR IR L
Sbjct: 498  LDPNLESAPRLTIPQVSGSLSSPRF---LTGDIHVASPVSVAGASTLSGRRHLHRHIRTL 554

Query: 700  LSN 692
            LSN
Sbjct: 555  LSN 557


>ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
            putative [Ricinus communis] gi|223548440|gb|EEF49931.1|
            splicing factor, arginine/serine-rich 2,rnap interacting
            protein, putative [Ricinus communis]
          Length = 791

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 57/124 (45%), Positives = 78/124 (62%), Gaps = 8/124 (6%)
 Frame = -2

Query: 1030 TYCVGLGREVPEGNWYCKGCRVSDMGSTNVQVPNPGRETRINNVEDSDPTPQLS----VS 863
            T+CVGLGR+VPEGNWYC+ CR   +GST+ Q  +P  + R  N   S P+P  +      
Sbjct: 425  TFCVGLGRQVPEGNWYCEVCRPVALGSTSSQALDPMPDQRTTNNIFSRPSPDTNSVEGFD 484

Query: 862  ASSDPS--LMHEIGI-LLASPRYPVAADDDIHLSSP-TGLGVSTLSGRRRIHRQIRNLLS 695
            A+S+PS  L    G   L+SPR+P     D+  +SP +G G STLS RR++HR I+NL+S
Sbjct: 485  ATSEPSPRLAFAPGFGSLSSPRFPAG---DVQAASPVSGAGGSTLSQRRQLHRHIQNLIS 541

Query: 694  NNRM 683
             +RM
Sbjct: 542  MSRM 545


>ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|222871639|gb|EEF08770.1|
            predicted protein [Populus trichocarpa]
          Length = 735

 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 56/128 (43%), Positives = 76/128 (59%), Gaps = 10/128 (7%)
 Frame = -2

Query: 1030 TYCVGLGREVPEGNWYCKGCRVSDMGSTNVQVPN--PGRETRINNVEDSDPTPQLSVSAS 857
            TYCVGLGR+VPEGNWYC  CR   +GS++ Q  +  P +    +N+ +  P+  L++   
Sbjct: 364  TYCVGLGRQVPEGNWYCDDCRPVALGSSSSQTQDSLPDQWNISSNIFNR-PSLMLNLEEG 422

Query: 856  SDPSLMHEIGIL-------LASPRYPVAADDDIHLSSP-TGLGVSTLSGRRRIHRQIRNL 701
             DP+L     +        L+SPR+P     D H++SP +G G STLSGRR IHR IR L
Sbjct: 423  LDPNLESSPRLTVPQAFGSLSSPRFPTG---DNHVASPVSGAGASTLSGRRHIHRNIRIL 479

Query: 700  LSNNRMTT 677
            LSN   +T
Sbjct: 480  LSNMNPST 487


>ref|NP_187218.1| RING/U-box protein [Arabidopsis thaliana]
            gi|6714443|gb|AAF26130.1|AC011620_6 unknown protein
            [Arabidopsis thaliana] gi|21539513|gb|AAM53309.1| unknown
            protein [Arabidopsis thaliana] gi|27311925|gb|AAO00928.1|
            unknown protein [Arabidopsis thaliana]
            gi|332640753|gb|AEE74274.1| RING/U-box protein
            [Arabidopsis thaliana]
          Length = 883

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
 Frame = -2

Query: 1030 TYCVGLGREVPEGNWYCKGCRVSDMGSTNVQVPNPGRETRINNVEDSDPTPQLSVSASSD 851
            TYCVGLGREVPEGNWYC+GCR   +GS + Q      + R +    S P+P +      D
Sbjct: 530  TYCVGLGREVPEGNWYCEGCRPVALGSASSQTHIISEQQRGSGFY-SRPSPLVVSGQYQD 588

Query: 850  PSLMHE------IGILLASPRYPVAADDDIHLSSPTGLGVSTLSGRRRIHRQIRNLLSNN 689
             SL+         G  L SPR P   + D   SSP+GLG +TLS RR +HR I+N+++ +
Sbjct: 589  VSLIVSPRTPFFNGENLFSPRIP---NGDAQGSSPSGLGATTLSRRRTLHRHIQNIINGD 645

Query: 688  RM 683
            R+
Sbjct: 646  RL 647