BLASTX nr result

ID: Cimicifuga21_contig00021377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021377
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601396.1| Membrane protein, putative [Medicago truncat...    67   1e-09
ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256...    67   1e-09
emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]    67   1e-09
ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
gb|AFK44808.1| unknown [Lotus japonicus]                               62   6e-08

>ref|XP_003601396.1| Membrane protein, putative [Medicago truncatula]
           gi|355490444|gb|AES71647.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 475

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = -3

Query: 234 KLAEIXXXXXXXXXXXXXXLPQLITQGRLAQNGEPNNINVVKTSHRIYAVLVGLFSSITG 55
           K+A+I                 L TQG+L +  E +N N  K +H+I+A+LVG+FSSI G
Sbjct: 287 KIADIASLACSFFGVLFFFREMLATQGQLDKVDEASNANA-KPTHQIFAILVGIFSSIIG 345

Query: 54  GVSYCLVRAVAKASDQPV 1
           G SYCL++A AKASDQP+
Sbjct: 346 GTSYCLIKAGAKASDQPL 363


>ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera]
           gi|297739206|emb|CBI28857.3| unnamed protein product
           [Vitis vinifera]
          Length = 390

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/58 (65%), Positives = 42/58 (72%)
 Frame = -3

Query: 174 PQLITQGRLAQNGEPNNINVVKTSHRIYAVLVGLFSSITGGVSYCLVRAVAKASDQPV 1
           P L  QG L +  E NNI V  + H IYAVLVGL SSI+GG+SYCL RA AKASDQPV
Sbjct: 222 PILAAQGGLPKAEEANNIYVGGSDH-IYAVLVGLVSSISGGISYCLTRAGAKASDQPV 278


>emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]
          Length = 413

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/58 (65%), Positives = 42/58 (72%)
 Frame = -3

Query: 174 PQLITQGRLAQNGEPNNINVVKTSHRIYAVLVGLFSSITGGVSYCLVRAVAKASDQPV 1
           P L  QG L +  E NNI V  + H IYAVLVGL SSI+GG+SYCL RA AKASDQPV
Sbjct: 245 PILAAQGGLPKAEEANNIYVGGSDH-IYAVLVGLVSSISGGISYCLTRAGAKASDQPV 301


>ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = -3

Query: 168 LITQGRLAQNGEPNNINVVKTSHRIYAVLVGLFSSITGGVSYCLVRAVAKASDQPV 1
           L TQG L + GE N I ++  +H +  VLV LFSSITGG+SYCLV+A AKASDQP+
Sbjct: 227 LTTQGALLRVGETNYIAIMGRNH-VLTVLVALFSSITGGISYCLVKAGAKASDQPL 281


>gb|AFK44808.1| unknown [Lotus japonicus]
          Length = 203

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/56 (58%), Positives = 40/56 (71%)
 Frame = -3

Query: 168 LITQGRLAQNGEPNNINVVKTSHRIYAVLVGLFSSITGGVSYCLVRAVAKASDQPV 1
           L TQG+LA+  E    +   TSH I+ +L+GLFSSI GG SYCL RA AKASDQP+
Sbjct: 37  LATQGQLAKAEEARKGSST-TSHHIFMILLGLFSSIIGGTSYCLTRAGAKASDQPL 91


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