BLASTX nr result

ID: Cimicifuga21_contig00021362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021362
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255...   202   2e-49
ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780...   154   5e-35
ref|XP_004157214.1| PREDICTED: uncharacterized protein LOC101229...   146   1e-32
ref|XP_002515845.1| gamma-tubulin complex component, putative [R...   144   4e-32
ref|XP_003636002.1| Gamma-tubulin complex component [Medicago tr...   142   1e-31

>ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255993 [Vitis vinifera]
          Length = 1239

 Score =  202 bits (513), Expect = 2e-49
 Identities = 128/341 (37%), Positives = 172/341 (50%), Gaps = 17/341 (4%)
 Frame = +1

Query: 4    KSANATWFEFSDTVYADYESVNCWPLGGLSENPFCDV-RGRKSESQSHLTLSNLEVPERN 180
            +S  + W   S+  YA  +  + WPLGGL +NPF D+ +     S+  + +SN  V    
Sbjct: 612  ESEESNWSWMSEDQYAGNQHGSSWPLGGLLKNPFNDINKTNLPSSECGIKMSNRNVGVLK 671

Query: 181  EEVVVGKVPYSGELFTFDDSLPQQVRGDFQLETGTHPLSNSRISTSWKLKYNCNVFNVNP 360
            EE     + + G+     +SL  +     Q E  T+   NS  S SW LKY+CN+ ++NP
Sbjct: 672  EE----DISHFGKKIDTYNSLAVKANDKDQHENRTYASPNSFNSQSWNLKYHCNILSMNP 727

Query: 361  MLTKNAWCCMIDKSRGQSCLDQKQSFISYFNFSSVEDPHMVYGEKIFAGPDRGFQTELNL 540
            MLTK+ +   +    G+   D  +SF  + +FS VEDP  +  EK+      GF      
Sbjct: 728  MLTKSGFLHTMSNPGGRHSSDHGESF-PFLDFSYVEDPLKLCVEKLNVSSGHGFGFGAGA 786

Query: 541  LSDSSTKDVDTCFREQK--HVEPDIPVHINSFSDAPIEN--------------RQEENAL 672
             S S T    +   + +  H + D      +  D  I+N               QE+   
Sbjct: 787  ESPSFTDSDASAISDMRNYHDKKDY-----NGDDTSIDNTKSYICSSLDVNQCNQEDVVS 841

Query: 673  TNTSGGAKWEISLSYLGKRFIXXXXXXXXXXXXXFRVPLDVIIEKCILQEILLQYEYISN 852
             N SGG+ WE  L+  G                 F +PL+ II KC+L EILLQY+Y+S 
Sbjct: 842  ANVSGGSSWETLLASSGNAVNNSVGQHTLSLGGVFEMPLEFIINKCLLPEILLQYKYVSK 901

Query: 853  FTIKLLEEGFDLQEHLLALRRYHFMEFADWADLFIMSLWRH 975
             TIKLLEEGFDLQEH LALRRYHFME ADWADLFIMSLW H
Sbjct: 902  LTIKLLEEGFDLQEHFLALRRYHFMELADWADLFIMSLWNH 942


>ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780017 [Glycine max]
          Length = 1179

 Score =  154 bits (388), Expect = 5e-35
 Identities = 91/218 (41%), Positives = 123/218 (56%), Gaps = 6/218 (2%)
 Frame = +1

Query: 340  NVFNVNPMLTKNAWCCMIDKSRGQSCLDQKQSFISYFNFSSVEDPHMVYGEKIFAGPDRG 519
            N  +VNPMLT+N+   ++ ++ G+   D +Q+ + YFNFS+VEDP  VY +K+       
Sbjct: 670  NPLSVNPMLTRNSILHLMGRNGGKYKADHEQT-LPYFNFSTVEDPCKVYMDKVPTNSRCR 728

Query: 520  FQTELNLLSDSSTKDVDTCFREQKHVEPDIPVHINSFSDAP------IENRQEENALTNT 681
              +   L S+ S ++     +  +H E D     N   D P        +  +   LT  
Sbjct: 729  SASSFTLDSNVSNRND----KNNEHGEIDCGRE-NGLVDVPKVCFDASPDLMDHKHLTVV 783

Query: 682  SGGAKWEISLSYLGKRFIXXXXXXXXXXXXXFRVPLDVIIEKCILQEILLQYEYISNFTI 861
            SGG+ WE  L   GK  +             F +PLD+II+KC+LQEI+LQY Y+S   I
Sbjct: 784  SGGSSWERLLGSFGKT-VNVDDTQKQSLLSAFEIPLDIIIDKCLLQEIMLQYNYVSKLAI 842

Query: 862  KLLEEGFDLQEHLLALRRYHFMEFADWADLFIMSLWRH 975
             +LEE F LQEHLLALRRYHFME ADWADLFI+SLW H
Sbjct: 843  NVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWHH 880


>ref|XP_004157214.1| PREDICTED: uncharacterized protein LOC101229894 [Cucumis sativus]
          Length = 1113

 Score =  146 bits (368), Expect = 1e-32
 Identities = 91/218 (41%), Positives = 120/218 (55%), Gaps = 4/218 (1%)
 Frame = +1

Query: 334  NC--NVFNVNPMLTKNAWCCMIDKSRGQSCLDQKQSFISYFNFSSVEDPHMVYGEKIFAG 507
            NC  N  ++NPM+T+NA+  +  K   +      QSF  +F+FS VEDP  V  E +  G
Sbjct: 715  NCSSNFLSLNPMVTRNAFLPVTTKPDQRHTSALGQSF-PFFDFSVVEDPCRVRAENVLPG 773

Query: 508  PDRGFQTELNLLSDSS-TKDVDTCFREQKHVEPDIPVHINSFSDAPIENRQEENALTNTS 684
                  +  N  S ++ +K  D+   EQ   E     +  S++D        EN  TN S
Sbjct: 774  SGAESLSGGNSQSPATNSKSTDSI--EQGSGEDIFVDNTKSYNDT-------ENLSTNVS 824

Query: 685  GGAKWEISLSYLGKRFIXXXXXXXXXXXXX-FRVPLDVIIEKCILQEILLQYEYISNFTI 861
            GG  WE +L    KR +              F +PLD +I KC++QEI+LQY Y+S  T+
Sbjct: 825  GGRSWETTLCTASKRTVDKSAEGQRLSRSGLFELPLDFVIHKCLVQEIILQYTYVSKLTV 884

Query: 862  KLLEEGFDLQEHLLALRRYHFMEFADWADLFIMSLWRH 975
            KLL+EGFDL+ HLLALRRYHFME ADWAD FI SLW H
Sbjct: 885  KLLDEGFDLRGHLLALRRYHFMEIADWADSFITSLWNH 922


>ref|XP_002515845.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223545000|gb|EEF46514.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 1209

 Score =  144 bits (363), Expect = 4e-32
 Identities = 110/324 (33%), Positives = 158/324 (48%), Gaps = 8/324 (2%)
 Frame = +1

Query: 28   EFSDTVYADYESVNCWPLGGLSENPFCDVRGRKSESQSHLTLSNLEVPERNEEVVVGKVP 207
            E S+  Y +  +   WPL     N F D +G K         + L   + N E +   VP
Sbjct: 607  EDSNLSYTNRLTAKSWPL---VNNTFYDDQGFKHYQGQPQGYTALAATKTNTESINEGVP 663

Query: 208  YSGELFTFDDSLPQQVRGDFQLETGTHPLSNSRISTSWKLKYNCNVFNVNPMLTKNAWCC 387
            Y  ++ +  D   + +  D QLE   H      +   WK  ++ N  + NPML KN +  
Sbjct: 664  YFRKMTSAKDCSIEALGKD-QLENAFHTADLFTLHP-WKDNHSSNFLSKNPMLRKNVFFN 721

Query: 388  MIDKSRGQSCLDQKQSFISYFNFSSVEDPHMVYGEKIFAGPDRGFQTELNLLSDSSTKDV 567
             + K   +  L   QS +  F+F +VEDP  VY EK+ A       +  +L+++  + D 
Sbjct: 722  PMSKPGQEFSLVYGQS-LPCFDFLNVEDPCKVYVEKLAAN------SRHSLINNGDSSDA 774

Query: 568  DTCFREQKHVEPD-IPVHINS------FSDAPIENRQEENALT-NTSGGAKWEISLSYLG 723
                 E++  + D   + IN+      FS   ++ + +E  ++ +  GG  WE  LS   
Sbjct: 775  AGKSHERRKQDNDGDSIFINNDKMASPFSSLYLKKQGQEALVSKDVYGGRSWESLLSKFS 834

Query: 724  KRFIXXXXXXXXXXXXXFRVPLDVIIEKCILQEILLQYEYISNFTIKLLEEGFDLQEHLL 903
                             F +PLD II+KC+LQEILLQY+Y+S   IK+LE GFDL EH  
Sbjct: 835  FIEKGSASEQKHSLSAMFDIPLDFIIDKCMLQEILLQYKYVSKLAIKILE-GFDLHEHYR 893

Query: 904  ALRRYHFMEFADWADLFIMSLWRH 975
             LRRY+FME ADWADLFIMSLW H
Sbjct: 894  VLRRYYFMEIADWADLFIMSLWHH 917


>ref|XP_003636002.1| Gamma-tubulin complex component [Medicago truncatula]
            gi|355501937|gb|AES83140.1| Gamma-tubulin complex
            component [Medicago truncatula]
          Length = 1206

 Score =  142 bits (359), Expect = 1e-31
 Identities = 94/233 (40%), Positives = 123/233 (52%), Gaps = 15/233 (6%)
 Frame = +1

Query: 322  KLKYNCNV-----FNVNPMLTKNAWCCMIDKSRGQSCLDQKQSFISYFNFSSVEDPHMVY 486
            K+ + CN+     F++NPMLT+N           Q   D  Q F  YFNFS+VEDP  VY
Sbjct: 659  KVDHQCNLPSINPFSMNPMLTRNVL--------PQQTADCAQPF-PYFNFSTVEDPCKVY 709

Query: 487  GEKIFAG----------PDRGFQTELNLLSDSSTKDVDTCFREQKHVEPDIPVHINSFSD 636
             +K+             PD    T  N  +D    D     R  +    D P +    S 
Sbjct: 710  MDKLLTDSICTNTYSFPPDSCASTYGNQNNDHGEID-----RGNEEGLVDEPKYGFDASL 764

Query: 637  APIENRQEENALTNTSGGAKWEISLSYLGKRFIXXXXXXXXXXXXXFRVPLDVIIEKCIL 816
              ++++Q    LT+TSGG+ W   L    K  +             F +PLD+II+KC++
Sbjct: 765  DVVDHKQY--VLTDTSGGSSWGRLLGSFRKT-VDCDATQRQTLLSTFEMPLDIIIDKCLI 821

Query: 817  QEILLQYEYISNFTIKLLEEGFDLQEHLLALRRYHFMEFADWADLFIMSLWRH 975
            QEI++QY Y+S   I +LEE F LQEHLLALRRYHFME ADWADLFI+SLWRH
Sbjct: 822  QEIMVQYNYVSKLIINVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWRH 874


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