BLASTX nr result

ID: Cimicifuga21_contig00021331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021331
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    75   8e-12
ref|XP_002514916.1| conserved hypothetical protein [Ricinus comm...    50   3e-08
gb|AAS20985.1| At1g67350-like protein [Hyacinthus orientalis]          50   4e-08
gb|AAS20982.1| unknown [Hyacinthus orientalis]                         50   1e-07
ref|XP_002322524.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
 Frame = -1

Query: 584 FHVIKPPPCVNPDKELML--KYLGVLEDCLCFMDEIWHDHYEIWVMKDYRVQDSWVKEYS 411
           F  +  PP + P+ +       LGVL  CL F D    D ++IWVMK Y VQ+SW KE+ 
Sbjct: 259 FQPVAAPPHLGPNDKDRTGDMMLGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESWTKEFI 318

Query: 410 FKKEVMKCIWRGDY--EVKKLHNCEMLMRYGDKKLGYYNPQNKTFRPIAINPRLEYFPPI 237
            K      IW  D    +  L N E+LM +  K +  YNP++++FR + I   ++ F   
Sbjct: 319 LKNPSTDIIWYWDLYRPISLLSNGEILMSHKSKAMVSYNPEDRSFRFLKIY-GIQNFEAN 377

Query: 236 IQVGSLFSPKSVGRSTKRD 180
             V S  SP+ + +    D
Sbjct: 378 PYVPSFLSPREIVKGENTD 396


>ref|XP_002514916.1| conserved hypothetical protein [Ricinus communis]
           gi|223545967|gb|EEF47470.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 49.7 bits (117), Expect(2) = 3e-08
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +1

Query: 67  DCCKKTKEMWSLPIRPYSFWTF 132
           D CKKTKEMWSLP+RPY FWTF
Sbjct: 35  DRCKKTKEMWSLPLRPYGFWTF 56



 Score = 33.5 bits (75), Expect(2) = 3e-08
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +2

Query: 131 SQFSCDAQISQVPGQRDPF 187
           SQ + DAQISQVPG+RDP+
Sbjct: 61  SQLAWDAQISQVPGRRDPY 79


>gb|AAS20985.1| At1g67350-like protein [Hyacinthus orientalis]
          Length = 91

 Score = 50.4 bits (119), Expect(2) = 4e-08
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +1

Query: 67  DCCKKTKEMWSLPIRPYSFWTF 132
           D CKKTKEMWSLPIRPY FWTF
Sbjct: 35  DQCKKTKEMWSLPIRPYGFWTF 56



 Score = 32.3 bits (72), Expect(2) = 4e-08
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +2

Query: 131 SQFSCDAQISQVPGQRDPF 187
           +Q + DAQISQVPG+RDP+
Sbjct: 61  AQLAWDAQISQVPGRRDPY 79


>gb|AAS20982.1| unknown [Hyacinthus orientalis]
          Length = 91

 Score = 50.4 bits (119), Expect(2) = 1e-07
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +1

Query: 67  DCCKKTKEMWSLPIRPYSFWTF 132
           D CKKTKEMWSLPIRPY FWTF
Sbjct: 35  DQCKKTKEMWSLPIRPYGFWTF 56



 Score = 31.2 bits (69), Expect(2) = 1e-07
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +2

Query: 131 SQFSCDAQISQVPGQRDPF 187
           +Q + D+QISQVPG+RDP+
Sbjct: 61  AQLAWDSQISQVPGRRDPY 79


>ref|XP_002322524.1| predicted protein [Populus trichocarpa] gi|222867154|gb|EEF04285.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
 Frame = -1

Query: 569 PPPCVNPDKELMLKYLGVLEDCLCFMDEIWHDHYEIWVMKDYRVQDSWVKEYSFKKEVMK 390
           P P +     L  + LGVL  CL       H+  EIWVMK+Y ++DSWVK +  +K    
Sbjct: 286 PLPNLETKSSLYYRNLGVLRQCLSLASSSVHN-VEIWVMKEYGMKDSWVKLFLLEKSSSL 344

Query: 389 CIWRGDYEVKKLHNCE--------MLMRYGDKKLGYYNPQNKTFRPIAINPRLEYFPPII 234
           C     Y++  L   +        +L    D+ L +Y+ + KT+  + I+     + P I
Sbjct: 345 CYSTVPYDLAPLAYVKDNNDDHKVLLKGLPDQSLIWYDLKLKTYEHVQIHGAPWLYQPYI 404

Query: 233 QVGSLFSP 210
            VGSL SP
Sbjct: 405 FVGSLVSP 412


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