BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021325
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]    488   e-135
emb|CBI23113.3| unnamed protein product [Vitis vinifera]              488   e-135
ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       464   e-128
ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|2...   433   e-119
ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protei...   431   e-118

>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score =  488 bits (1256), Expect = e-135
 Identities = 256/378 (67%), Positives = 305/378 (80%), Gaps = 3/378 (0%)
 Frame = -2

Query: 1177 FFIDRKSRVVIITGPNTGGKTICLKTVGLAAMMAKSGLYVLSSEPVRIPWFDSIFADIGD 998
            FFI +++RV++ITGPNTGGKTICLKTVGLAAMMA+SGL+VL++EPVRIPWFD +FADIGD
Sbjct: 415  FFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPVRIPWFDYVFADIGD 474

Query: 997  EQSLSHSLSTFSGHLRQISGIQAQSTGQSLVLLDEVGAGTNPLEGAALGMSLLESFAEAG 818
            EQSLS SLSTFSGHL+QIS I+AQST QSLVLLDEVGAGTNPLEGAALGMSLLESFAE G
Sbjct: 475  EQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGAALGMSLLESFAETG 534

Query: 817  ALLTIATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYKILWGVPGRSNAISIAERLGL 638
            ALLTIATTHH ELKTLKYSNDAFENACMEFDEVNLKPTYKILWG+PGRSNAI+IAERLG+
Sbjct: 535  ALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGV 594

Query: 637  PKIVLDNARELYGTASAEINEVIIEMEHFKQDYQEHVNEAHHYLMHSRXXXXXXXXXXXK 458
            PK VLD ARE YG ASAEINEVII+ME FKQ++QE VN+A +YLM SR           K
Sbjct: 595  PKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRK 654

Query: 457  ITEHRITQRYRMINEISEAAAIARSTIHKSLRQLRSSIAHSPQSITVTNSW---IDNKQY 287
            + EH   QRY  + E+SEAAA+ARS +HK +RQLRSS     Q      S      + Q+
Sbjct: 655  LMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATRPSQPTAADKSQHASATSNQH 714

Query: 286  NTAEKVQQPISNNNELYVESPQKSASGRRIVLPNVGDMVYVPSLRKEATVLKVETSKEEI 107
              A+  ++P ++ ++   +  Q+S+S ++ V P VGDMV+V SL K+ATVL+VE+SK ++
Sbjct: 715  TAADINERPTTSESKHPAKVAQQSSSEKKRV-PKVGDMVHVSSLGKKATVLEVESSKGQL 773

Query: 106  VVQATNMKLRLKLKDIQT 53
            VVQA NMKL+LKL D++T
Sbjct: 774  VVQAGNMKLKLKLTDVET 791


>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  488 bits (1256), Expect = e-135
 Identities = 256/378 (67%), Positives = 305/378 (80%), Gaps = 3/378 (0%)
 Frame = -2

Query: 1177 FFIDRKSRVVIITGPNTGGKTICLKTVGLAAMMAKSGLYVLSSEPVRIPWFDSIFADIGD 998
            FFI +++RV++ITGPNTGGKTICLKTVGLAAMMA+SGL+VL++EPVRIPWFD +FADIGD
Sbjct: 431  FFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPVRIPWFDYVFADIGD 490

Query: 997  EQSLSHSLSTFSGHLRQISGIQAQSTGQSLVLLDEVGAGTNPLEGAALGMSLLESFAEAG 818
            EQSLS SLSTFSGHL+QIS I+AQST QSLVLLDEVGAGTNPLEGAALGMSLLESFAE G
Sbjct: 491  EQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGAALGMSLLESFAETG 550

Query: 817  ALLTIATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYKILWGVPGRSNAISIAERLGL 638
            ALLTIATTHH ELKTLKYSNDAFENACMEFDEVNLKPTYKILWG+PGRSNAI+IAERLG+
Sbjct: 551  ALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGV 610

Query: 637  PKIVLDNARELYGTASAEINEVIIEMEHFKQDYQEHVNEAHHYLMHSRXXXXXXXXXXXK 458
            PK VLD ARE YG ASAEINEVII+ME FKQ++QE VN+A +YLM SR           K
Sbjct: 611  PKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRK 670

Query: 457  ITEHRITQRYRMINEISEAAAIARSTIHKSLRQLRSSIAHSPQSITVTNSW---IDNKQY 287
            + EH   QRY  + E+SEAAA+ARS +HK +RQLRSS     Q      S      + Q+
Sbjct: 671  LMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATRPSQPTAADKSQHASATSNQH 730

Query: 286  NTAEKVQQPISNNNELYVESPQKSASGRRIVLPNVGDMVYVPSLRKEATVLKVETSKEEI 107
              A+  ++P ++ ++   +  Q+S+S ++ V P VGDMV+V SL K+ATVL+VE+SK ++
Sbjct: 731  TAADINERPTTSESKHPAKVAQQSSSEKKRV-PKVGDMVHVSSLGKKATVLEVESSKGQL 789

Query: 106  VVQATNMKLRLKLKDIQT 53
            VVQA NMKL+LKL D++T
Sbjct: 790  VVQAGNMKLKLKLTDVET 807


>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  464 bits (1193), Expect = e-128
 Identities = 244/377 (64%), Positives = 296/377 (78%), Gaps = 3/377 (0%)
 Frame = -2

Query: 1177 FFIDRKSRVVIITGPNTGGKTICLKTVGLAAMMAKSGLYVLSSEPVRIPWFDSIFADIGD 998
            F + +K+RV++ITGPNTGGKTICLKTVGLAAMMAKSGLYVL+SE  +IPWFDS+FADIGD
Sbjct: 415  FLVSQKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESAQIPWFDSVFADIGD 474

Query: 997  EQSLSHSLSTFSGHLRQISGIQAQSTGQSLVLLDEVGAGTNPLEGAALGMSLLESFAEAG 818
            EQSLS SLSTFSGHL+QIS I++QST QSLVLLDEVGAGTNPLEGAALGM+LLESFA+  
Sbjct: 475  EQSLSQSLSTFSGHLKQISNIKSQSTSQSLVLLDEVGAGTNPLEGAALGMALLESFAQDS 534

Query: 817  ALLTIATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYKILWGVPGRSNAISIAERLGL 638
             LLT+ATTHHGELKTLKYS++AFENACMEFDEVNLKPTYK+LWGVPGRSNAI+IAERLGL
Sbjct: 535  CLLTMATTHHGELKTLKYSDEAFENACMEFDEVNLKPTYKVLWGVPGRSNAINIAERLGL 594

Query: 637  PKIVLDNARELYGTASAEINEVIIEMEHFKQDYQEHVNEAHHYLMHSRXXXXXXXXXXXK 458
            P +V+D AR LYG+ASAEI+EVI +ME  KQ+YQE ++EA HYL HSR           K
Sbjct: 595  PSVVVDTARMLYGSASAEIDEVITDMERLKQEYQELLDEARHYLRHSRGLYNSLLNTRRK 654

Query: 457  ITEHRITQRYRMINEISEAAAIARSTIHKSLRQLRSSIAHSPQ---SITVTNSWIDNKQY 287
            I E+    R++ + ++SEAAA+ARS +HK +R+L +S     Q   +I+ +N    NK  
Sbjct: 655  IIEYSTNLRFKKMRDVSEAAAMARSILHKKVRELDASAKQPSQNNKTISSSNLSATNKSQ 714

Query: 286  NTAEKVQQPISNNNELYVESPQKSASGRRIVLPNVGDMVYVPSLRKEATVLKVETSKEEI 107
              AE  +  I++ +   V+   +S S +    P VGDMV+V SL K+ TVLKV++SK EI
Sbjct: 715  TVAENKEPTIADKSASSVKVFNRSRSDKS-GPPKVGDMVHVSSLGKQVTVLKVDSSKGEI 773

Query: 106  VVQATNMKLRLKLKDIQ 56
            VVQA NMKL+LKL DIQ
Sbjct: 774  VVQAGNMKLKLKLTDIQ 790


>ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|222858522|gb|EEE96069.1|
            predicted protein [Populus trichocarpa]
          Length = 864

 Score =  433 bits (1113), Expect = e-119
 Identities = 249/400 (62%), Positives = 293/400 (73%), Gaps = 27/400 (6%)
 Frame = -2

Query: 1177 FFIDRKSRVVIITGPNTGGKTICLKTVGLAAMMAKSGLYVLSSEPVRIPWFDSIFADIGD 998
            FFI  K+RV+ ITGPNTGGKTICLKTVGLAAMMAKSGL+VLSSE V IPWFDS+FADIGD
Sbjct: 471  FFISHKTRVLTITGPNTGGKTICLKTVGLAAMMAKSGLHVLSSESVEIPWFDSVFADIGD 530

Query: 997  EQSLSHSLSTFSGHLRQISGIQ-----AQSTGQSLVLLDEVGAGTNPLEGAALGMSLLES 833
            EQSLS SLSTFSGHL+QIS  +       S  ++  L   VGAGTNPLEGAALGMSLLES
Sbjct: 531  EQSLSQSLSTFSGHLKQISIREFPWNLTDSPCRTFDLNPRVGAGTNPLEGAALGMSLLES 590

Query: 832  FAEAGALLTIATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYKILWGVP--------- 680
            FA++GALLTIATTHHGELK+LKYSNDAFENACMEFDEVNLKPTYKILWGVP         
Sbjct: 591  FADSGALLTIATTHHGELKSLKYSNDAFENACMEFDEVNLKPTYKILWGVPVTILHNITA 650

Query: 679  -----GRSNAISIAERLGLPKIVLDNARELYGTASAEINEVIIEMEHFKQDYQEHVNEAH 515
                 GRSNAI+I+E+LGLP +V+ NAREL+G ASAEINEVII+ME FKQD QE ++EA 
Sbjct: 651  AVFPIGRSNAINISEKLGLPSVVVSNARELHGAASAEINEVIIDMERFKQDSQELLHEAR 710

Query: 514  HYLMHSRXXXXXXXXXXXKITEHRITQRYRMINEISEAAAIARSTIHKSLRQLRSSIAHS 335
            H+LM S+           KI EH   QRYR + +ISEAA++ARS +HK +RQLR   AH+
Sbjct: 711  HHLMLSKNLHEKLKLARRKIKEHGTEQRYRKMRQISEAASMARSILHKKVRQLR---AHA 767

Query: 334  PQSITVTNSWIDNKQYNTAE-------KVQQPISNNNELYVE-SPQKSASGRRIVLPNVG 179
             Q+   T    D KQ +T++       K  +P  + +   VE + Q SA      LP VG
Sbjct: 768  TQTFQPT---ADQKQLSTSDSRFTAEAKNGRPTESMSTSVVEINKQPSAMTE---LPEVG 821

Query: 178  DMVYVPSLRKEATVLKVETSKEEIVVQATNMKLRLKLKDI 59
            DMV V SL ++ATVL+V+ SKEEI+VQA NMKL+LKL +I
Sbjct: 822  DMVQVSSLGRKATVLRVDRSKEEILVQAGNMKLKLKLAEI 861


>ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protein-like [Brachypodium
            distachyon]
          Length = 833

 Score =  431 bits (1107), Expect = e-118
 Identities = 217/379 (57%), Positives = 282/379 (74%), Gaps = 6/379 (1%)
 Frame = -2

Query: 1177 FFIDRKSRVVIITGPNTGGKTICLKTVGLAAMMAKSGLYVLSSEPVRIPWFDSIFADIGD 998
            F I  ++ V++ITGPNTGGKTI LKTVGLA++MAK GLY+L+SEPV+IPWFD+++ADIGD
Sbjct: 451  FMIGEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEPVKIPWFDAVYADIGD 510

Query: 997  EQSLSHSLSTFSGHLRQISGIQAQSTGQSLVLLDEVGAGTNPLEGAALGMSLLESFAEAG 818
            EQSL+ SLSTFSGHL+QI  I+AQST QSLVLLDEVGAGTNPLEGAALGMSLLESFAEAG
Sbjct: 511  EQSLTQSLSTFSGHLKQIGAIRAQSTSQSLVLLDEVGAGTNPLEGAALGMSLLESFAEAG 570

Query: 817  ALLTIATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYKILWGVPGRSNAISIAERLGL 638
            + LT+ATTHHGELKTLKYSND+FENAC+EFDE NLKPT++ILWG+PGRSNAI+IAERLGL
Sbjct: 571  SFLTLATTHHGELKTLKYSNDSFENACVEFDEENLKPTFRILWGIPGRSNAINIAERLGL 630

Query: 637  PKIVLDNARELYGTASAEINEVIIEMEHFKQDYQEHVNEAHHYLMHSRXXXXXXXXXXXK 458
            P  ++++AR L GTA AEIN +I++ME FKQ+Y E + +A HYLM SR            
Sbjct: 631  PLDIIESARHLLGTAGAEINALIMDMEKFKQEYDEQLQQAQHYLMQSRELHNNLEVAQKN 690

Query: 457  ITEHRITQRYRMINEISEAAAIARSTIHKSLRQLRSS-----IAHSPQSITVTNS-WIDN 296
            + +H I QR R    +SE A +ARS IHK  +Q R S     +    +++    S  +  
Sbjct: 691  VMDHTIAQRKRKSRVVSEYAVMARSIIHKKFQQFRESAIAQRVLEEERAVEKAKSERVKG 750

Query: 295  KQYNTAEKVQQPISNNNELYVESPQKSASGRRIVLPNVGDMVYVPSLRKEATVLKVETSK 116
             + ++   ++   + N+ +  E+  +        +P VGD+VYVP L+ +ATV+K+++SK
Sbjct: 751  PEPSSTSAIKMAQNTNSSMATEANDEDGG-----IPEVGDLVYVPKLKNQATVVKIDSSK 805

Query: 115  EEIVVQATNMKLRLKLKDI 59
             E+ +QA  MKL+LKLKD+
Sbjct: 806  NEVQIQAGMMKLKLKLKDV 824