BLASTX nr result

ID: Cimicifuga21_contig00021311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021311
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633596.1| PREDICTED: uncharacterized protein LOC100852...   127   3e-27
emb|CAN68823.1| hypothetical protein VITISV_007107 [Vitis vinifera]   126   3e-27
ref|XP_002512189.1| conserved hypothetical protein [Ricinus comm...   119   4e-25
ref|XP_002530705.1| conserved hypothetical protein [Ricinus comm...   114   1e-23
ref|XP_002323282.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22

>ref|XP_003633596.1| PREDICTED: uncharacterized protein LOC100852544 [Vitis vinifera]
           gi|297741209|emb|CBI32160.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  127 bits (318), Expect = 3e-27
 Identities = 73/149 (48%), Positives = 94/149 (63%)
 Frame = +3

Query: 24  MHKDSHVISKFKPKIRIVHIFAPEIIKTDVENFRELVQRLTGKPPXXXXXXXXXXXXRSM 203
           M+KDSH ISKFKPKIRI+H+FAPEII+TD  NFR+LVQRLTGKP             RSM
Sbjct: 19  MNKDSHEISKFKPKIRIIHVFAPEIIQTDAANFRDLVQRLTGKP---AANFRGRKKKRSM 75

Query: 204 MTKNLQEPRAVYCKPEATTVVEPQYGYQTSWGSEETIKSEEQEIMWGGENSSGFYSGFGD 383
            +K++ +        E++  +E    +      E     +EQE MW  ENS+GF+ GF D
Sbjct: 76  RSKDVLK---TLIHHESSKTMELPEEFPCLKNGERV--KQEQEKMWRDENSNGFFGGFAD 130

Query: 384 LDGFIQGLSEFPLLPFNGSSQSQVDMFGE 470
           LDGF+Q LS+FPLLPF     S++D+F E
Sbjct: 131 LDGFMQELSQFPLLPF---ESSRMDVFQE 156


>emb|CAN68823.1| hypothetical protein VITISV_007107 [Vitis vinifera]
          Length = 160

 Score =  126 bits (317), Expect = 3e-27
 Identities = 74/149 (49%), Positives = 95/149 (63%)
 Frame = +3

Query: 24  MHKDSHVISKFKPKIRIVHIFAPEIIKTDVENFRELVQRLTGKPPXXXXXXXXXXXXRSM 203
           M+KDSH ISKFKPKIRI+H+FAPEII+TD  NFR+LVQRLTGKP             RSM
Sbjct: 19  MNKDSHEISKFKPKIRIIHVFAPEIIQTDAANFRBLVQRLTGKP---AANFRGXKKKRSM 75

Query: 204 MTKNLQEPRAVYCKPEATTVVEPQYGYQTSWGSEETIKSEEQEIMWGGENSSGFYSGFGD 383
            +K++ +        E++  +E    +      E     +EQE MW  ENS+GF+ GF D
Sbjct: 76  RSKDVLK---TLIHHESSKTMELPEEFPCLKNGERV--KQEQEKMWRDENSNGFFGGFAD 130

Query: 384 LDGFIQGLSEFPLLPFNGSSQSQVDMFGE 470
           LDGF+Q LS+FPLLPF     S++D+F E
Sbjct: 131 LDGFMQELSQFPLLPF---ESSRMDVFQE 156


>ref|XP_002512189.1| conserved hypothetical protein [Ricinus communis]
           gi|223548733|gb|EEF50223.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 171

 Score =  119 bits (299), Expect = 4e-25
 Identities = 72/139 (51%), Positives = 87/139 (62%), Gaps = 9/139 (6%)
 Frame = +3

Query: 24  MHKDSHVISKFKPKIRIVHIFAPEIIKTDVENFRELVQRLTGKPPXXXXXXXXXXXXRSM 203
           MHKDSHVISK KPK+RI+HIFAPEIIKTDVENFRELVQRLTGK P             S 
Sbjct: 23  MHKDSHVISKLKPKVRIIHIFAPEIIKTDVENFRELVQRLTGK-PGDNRDHESSNKGSSG 81

Query: 204 MTKNLQEPRAVYC----KPEATTVVEPQ---YGYQTSWGSEETIKSEEQEIMWG--GENS 356
           M KN +   +  C    K + +T    Q   YG  +S   E+ +K EE+  +WG  GENS
Sbjct: 82  MKKNKKTRSSSICNKLMKKKKSTSFSMQLEDYGI-SSLIQEDKVKMEEENEIWGSNGENS 140

Query: 357 SGFYSGFGDLDGFIQGLSE 413
           + F+ GF D +GFI GLS+
Sbjct: 141 NEFFDGFSDFNGFIHGLSD 159


>ref|XP_002530705.1| conserved hypothetical protein [Ricinus communis]
           gi|223529719|gb|EEF31659.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 181

 Score =  114 bits (286), Expect = 1e-23
 Identities = 72/160 (45%), Positives = 90/160 (56%), Gaps = 16/160 (10%)
 Frame = +3

Query: 24  MHKDSHVISKFKPKIRIVHIFAPEIIKTDVENFRELVQRLTGKPPXXXXXXXXXXXXRSM 203
           MHKDS  ISK KPKIRI+HIFAPEIIKTDV NFRELVQRLTGKP             +  
Sbjct: 32  MHKDSQTISKVKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKP----------AADQKG 81

Query: 204 MTKNLQEPRAV---------YCKPEAT--TVVEPQYGYQTSWGSEETIKSEEQEIMWGGE 350
               +++PR V         + +P      VV  +   ++  G  +  + EE+E MW   
Sbjct: 82  SKSKIKKPRRVDHHHQHHHHHHQPRTNLPAVVTKKVEIRSGLGMVKK-EEEEEEAMWNCA 140

Query: 351 NSSGFYSGFGDLDGFIQGLSEFPLLP-----FNGSSQSQV 455
           NS GF +GF DLDGFIQ L EF +LP      +G  +SQ+
Sbjct: 141 NSGGFLAGFADLDGFIQELDEFSMLPMETNHMHGFGESQL 180


>ref|XP_002323282.1| predicted protein [Populus trichocarpa] gi|222867912|gb|EEF05043.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  110 bits (275), Expect = 3e-22
 Identities = 65/139 (46%), Positives = 78/139 (56%)
 Frame = +3

Query: 24  MHKDSHVISKFKPKIRIVHIFAPEIIKTDVENFRELVQRLTGKPPXXXXXXXXXXXXRSM 203
           MHK+SH I+K KPKIRI+HIFAPEIIKTD  NFRELVQRLTGKP                
Sbjct: 1   MHKNSHTIAKVKPKIRIIHIFAPEIIKTDAANFRELVQRLTGKPSDQKGGCR-------- 52

Query: 204 MTKNLQEPRAVYCKPEATTVVEPQYGYQTSWGSEETIKSEEQEIMWGGENSSGFYSGFGD 383
                Q+PR       A T  +P+        + +  + + +E MW G  S  F  GF D
Sbjct: 53  -----QKPR------RARTQDQPRN------CNSDLCEEKPEEEMWNGAYSGSFLGGFTD 95

Query: 384 LDGFIQGLSEFPLLPFNGS 440
           LDGFIQ L EFPLLP + +
Sbjct: 96  LDGFIQELGEFPLLPMDAN 114


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